Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0148
         (612 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    30   0.051
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            23   5.9  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           23   7.8  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   7.8  
AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein p...    23   7.8  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    23   7.8  

>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 30.3 bits (65), Expect = 0.051
 Identities = 24/107 (22%), Positives = 44/107 (41%)
 Frame = +2

Query: 8   NMGNTLKEMQDVAGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKLK 187
           N+    + M     A + Y   ++ +P + D +  L  + +D G I  A   ++ ALK+ 
Sbjct: 501 NLARLYEAMAVFDKADKLYKDILKEHPNYIDCYLRLGCMARDKGLIFVASDFFKDALKIN 560

Query: 188 PDFPDAYCNLAHCLQIVCDWTDLRLE*KNWSALSLSSWRKTDCHQYI 328
            + PD    L +       WT   L  KN+  +  +    +D +  I
Sbjct: 561 MENPDTRSLLGNLHLAKMQWT---LGQKNFETILKNPATSSDAYSLI 604



 Score = 25.0 bits (52), Expect = 1.9
 Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
 Frame = +2

Query: 35  QDVAGALQCYTRAIQINP-AFADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYC 211
           +D  GAL  Y +A++ NP   A     +        N  +A  +++ AL L+P    A  
Sbjct: 176 KDYRGALAFYKKALRTNPNCPAAVRLGMGHCFLKLSNPDKAKLAFQRALDLEPQCVGALV 235

Query: 212 NLA 220
            LA
Sbjct: 236 GLA 238



 Score = 24.2 bits (50), Expect = 3.4
 Identities = 14/59 (23%), Positives = 23/59 (38%)
 Frame = +2

Query: 5   SNMGNTLKEMQDVAGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALK 181
           + +G  L     +  A   + +  +    F D   N+A I+ +      AIQ Y   LK
Sbjct: 650 NGIGAVLAHKGCIIEARDIFAQVREATADFCDVWINIAHIYVEQKQYISAIQMYENCLK 708


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 48  VLCNATQGRFKLIPHLR 98
           + CN TQ   ++ PHL+
Sbjct: 284 IFCNETQAHLEMNPHLK 300


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = -2

Query: 119 WPNCYEHPQMR 87
           WP CY  P MR
Sbjct: 42  WPPCYRGPDMR 52


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = -3

Query: 526 DCIKCDSDGYRNRCLRTRYEGGLVNL*GTC 437
           +C  C+ +GY  +C   R+   L    G C
Sbjct: 338 ECKPCNCNGYSTKCFFDRHLYNLTGHGGHC 367


>AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein
           protein.
          Length = 285

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = +1

Query: 10  HGQYAEGNARCSRCSAMLHKGDSN*SRIC-GC 102
           HG+  + +++C RC+   H+G     R C GC
Sbjct: 228 HGK--DRSSKCHRCAEDKHEGPCTRERKCLGC 257


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 9/23 (39%), Positives = 15/23 (65%), Gaps = 4/23 (17%)
 Frame = -3

Query: 544 SCKPGTD----CIKCDSDGYRNR 488
           +C+  TD    CI+C S+G++ R
Sbjct: 489 ACRSSTDRQQLCIRCGSEGHKAR 511


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 736,024
Number of Sequences: 2352
Number of extensions: 17149
Number of successful extensions: 37
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59711994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)