Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0147
         (586 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    25   1.8  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    25   1.8  
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    24   4.2  
U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.          23   5.5  
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.          23   5.5  
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.          23   5.5  
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    23   9.6  
AY255856-1|AAP13482.1|  248|Anopheles gambiae glutathione transf...    23   9.6  

>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 25.0 bits (52), Expect = 1.8
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +2

Query: 215 RRLL*QFHNSLLTNPCVILSALEVLGYKVVASS 313
           RR L  F N ++  PCV++S++ +LG+ +   S
Sbjct: 229 RRTLYYFFNLIV--PCVLISSMALLGFTLPPDS 259


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 25.0 bits (52), Expect = 1.8
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +2

Query: 215 RRLL*QFHNSLLTNPCVILSALEVLGYKVVASS 313
           RR L  F N ++  PCV++S++ +LG+ +   S
Sbjct: 229 RRTLYYFFNLIV--PCVLISSMALLGFTLPPDS 259


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = +2

Query: 215 RRLL*QFHNSLLTNPCVILSALEVLGYKVVASS 313
           RR L  F N ++  PCV+++++ +LG+ +   S
Sbjct: 244 RRTLYYFFNLIV--PCVLIASMALLGFTLPPDS 274


>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 10/34 (29%), Positives = 15/34 (44%)
 Frame = +2

Query: 293 YKVVASSSTAVKQDYNEYMWTMRKEFSEPEPSII 394
           Y V    S        + MW  ++E+ E  PSI+
Sbjct: 338 YSVWIGGSILASLSTFQQMWISKQEYDESGPSIV 371


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 10/34 (29%), Positives = 15/34 (44%)
 Frame = +2

Query: 293 YKVVASSSTAVKQDYNEYMWTMRKEFSEPEPSII 394
           Y V    S        + MW  ++E+ E  PSI+
Sbjct: 338 YSVWIGGSILASLSTFQQMWISKQEYDESGPSIV 371


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 10/34 (29%), Positives = 15/34 (44%)
 Frame = +2

Query: 293 YKVVASSSTAVKQDYNEYMWTMRKEFSEPEPSII 394
           Y V    S        + MW  ++E+ E  PSI+
Sbjct: 338 YSVWIGGSILASLSTFQQMWISKQEYDESGPSIV 371


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 22.6 bits (46), Expect = 9.6
 Identities = 10/33 (30%), Positives = 21/33 (63%)
 Frame = +2

Query: 215 RRLL*QFHNSLLTNPCVILSALEVLGYKVVASS 313
           R+ L  F N ++  PCV+++++ +LG+ +   S
Sbjct: 212 RKTLYYFFNLIV--PCVLIASMALLGFTLPPDS 242


>AY255856-1|AAP13482.1|  248|Anopheles gambiae glutathione
           transferase o1 protein.
          Length = 248

 Score = 22.6 bits (46), Expect = 9.6
 Identities = 15/53 (28%), Positives = 23/53 (43%)
 Frame = +2

Query: 254 NPCVILSALEVLGYKVVASSSTAVKQDYNEYMWTMRKEFSEPEPSIIVEQDNI 412
           NP   + ALE+ G + V    + V  DY E  ++ ++    P       QD I
Sbjct: 65  NPLGKVPALEIPGKEGVTLYESLVLSDYIEEAYSAQQRKLYPADPFSKAQDRI 117


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 578,128
Number of Sequences: 2352
Number of extensions: 10223
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55927431
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)