Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0147
         (586 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g57630.2 68416.m06421 exostosin family protein contains Pfam ...    27   7.0  
At3g57630.1 68416.m06420 exostosin family protein contains Pfam ...    27   7.0  
At4g28670.1 68417.m04097 protein kinase family protein contains ...    27   9.2  
At3g01510.1 68416.m00077 5'-AMP-activated protein kinase beta-1 ...    27   9.2  
At1g62710.1 68414.m07078 vacuolar processing enzyme beta / beta-...    27   9.2  

>At3g57630.2 68416.m06421 exostosin family protein contains Pfam
           profile: PF03016 exostosin family
          Length = 791

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +3

Query: 129 ASYGHKNPWRVLVSGLKAEDI 191
           A+YGH+  W V  S LK +DI
Sbjct: 731 ATYGHEEDWAVQFSKLKHDDI 751


>At3g57630.1 68416.m06420 exostosin family protein contains Pfam
           profile: PF03016 exostosin family
          Length = 793

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +3

Query: 129 ASYGHKNPWRVLVSGLKAEDI 191
           A+YGH+  W V  S LK +DI
Sbjct: 733 ATYGHEEDWAVQFSKLKHDDI 753


>At4g28670.1 68417.m04097 protein kinase family protein contains
           Pfam domain, PF00069: Protein kinase domain
          Length = 625

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -1

Query: 367 LFSHCPHILIIILFNCC*TRSNYFVTQNF 281
           + S C H  ++ L  CC T  N F+   F
Sbjct: 378 VISRCQHKNLVRLLGCCFTNMNSFIVYEF 406


>At3g01510.1 68416.m00077 5'-AMP-activated protein kinase beta-1
           subunit-related contains similarity to Swiss-Prot:P80387
           5'-AMP-activated protein kinase, beta-1 subunit (AMPK
           beta-1 chain) (AMPKb) (40 kDa subunit) [Sus scrofa]
          Length = 591

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +2

Query: 284 VLGYKVVASSSTAVKQDYNEYMWTMRK 364
           VL    ++SSST  K + NEYM T+ K
Sbjct: 57  VLRVVAMSSSSTPFKMNLNEYMVTLEK 83


>At1g62710.1 68414.m07078 vacuolar processing enzyme beta / beta-VPE
           identical to SP|Q39044 Vacuolar processing enzyme,
           beta-isozyme precursor (EC 3.4.22.-) (Beta-VPE)
           {Arabidopsis thaliana}
          Length = 486

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
 Frame = +3

Query: 120 GNLASYGHKNPW---RVLVSGLKAEDIEELKRFACGGYCDNSTIVYLQI 257
           G+L  YG K+      V  +G+  E +EE    ACGGY +    V+  I
Sbjct: 433 GSLTQYGMKHMRAFANVCNNGVSKELMEEASTAACGGYSEARYTVHPSI 481


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,808,234
Number of Sequences: 28952
Number of extensions: 220703
Number of successful extensions: 445
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 429
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 445
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1151426952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)