Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0146
(468 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0997 - 23203166-23203330,23203627-23203693,23203771-232038... 45 3e-05
03_02_0441 - 8517501-8517701,8518004-8518139,8519995-8520107,852... 42 2e-04
01_07_0224 - 42121011-42122486 28 4.3
10_02_0195 + 6578384-6578629,6578710-6579300,6586302-6587512,658... 27 5.7
07_03_0073 - 13063209-13063403,13063489-13063579,13063707-130637... 27 5.7
01_07_0027 - 40578075-40578437,40578647-40578767,40578852-405789... 27 5.7
01_05_0117 - 18300157-18301106,18301149-18301543,18302592-183026... 27 7.5
12_02_0410 + 18701258-18701327,18701398-18701630,18701782-187026... 27 10.0
10_02_0018 - 4264602-4264796,4265050-4265131,4265217-4265327,426... 27 10.0
03_02_0524 - 9127695-9127991 27 10.0
>07_03_0997 -
23203166-23203330,23203627-23203693,23203771-23203862,
23204820-23204956,23205050-23205116,23205212-23205278,
23205356-23205441,23206061-23206153,23206337-23206522,
23207316-23207372,23207455-23207582,23207662-23207731,
23207815-23207950,23208378-23208529,23208606-23208680,
23208765-23208929,23209063-23209128,23209229-23209333,
23209929-23210132,23210462-23211715
Length = 1123
Score = 45.2 bits (102), Expect = 3e-05
Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Frame = +2
Query: 203 VLPEIAI*AADSAQRTIVLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFM 382
V P ++ + ++ ++ LQ D + + +KVCD +SELA + + N W E L F+
Sbjct: 99 VWPHLSPAGQAALKQHLLSALQSDPPKPIAKKVCDAISELAALLLPE---NAWAELLPFL 155
Query: 383 FTCASAQD-PNIKEAGIRMF 439
F AS + PN++E+ + +F
Sbjct: 156 FRAASGPEAPNLQESALLIF 175
Score = 38.7 bits (86), Expect = 0.002
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Frame = +3
Query: 6 FYQLLNTLLSTDNDIRSQAEDAYNNIP---TETKVVHLVNSIQNADIAEDVRQTAAVLLR 176
F LL+TL+S+ N R+ AE A++ + E + L +S+ + D+R AAVLLR
Sbjct: 21 FDALLSTLMSSSNADRAAAEAAFHRLRGSHPEPLALRLASSLSSPATPADLRAMAAVLLR 80
Query: 177 RLFS 188
+L S
Sbjct: 81 KLLS 84
>03_02_0441 -
8517501-8517701,8518004-8518139,8519995-8520107,
8520189-8520284,8520376-8520590,8520675-8520797,
8520887-8520917,8521020-8521079,8521951-8522106,
8522185-8522274,8522347-8522562,8522671-8522805,
8522898-8523401,8523485-8523700,8524411-8524456,
8524542-8524678,8525059-8525191,8526084-8526358
Length = 960
Score = 42.3 bits (95), Expect = 2e-04
Identities = 22/85 (25%), Positives = 46/85 (54%)
Frame = +2
Query: 209 PEIAI*AADSAQRTIVLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFT 388
P++ A S ++ ++ ++ +D S +RR +VVS +A+ + +WPE L F+F
Sbjct: 69 PKLPPHAKASLKQALIDSITIDHSHLVRRASANVVSIIAKYAVPA---GEWPELLPFIFQ 125
Query: 389 CASAQDPNIKEAGIRMFTSVPGVFG 463
C+ + + +E + +F+S+ G
Sbjct: 126 CSQSPQEDHREVALILFSSLTETIG 150
Score = 36.7 bits (81), Expect = 0.009
Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +3
Query: 15 LLNTLLSTDNDIRSQAEDAYNNIPTETKVV-HLVNSIQNADIAEDVRQTAAVLLRR 179
LL L DND R QAE+ + + +VV LV+ ++ A +VRQ AAVLLR+
Sbjct: 8 LLIQFLMPDNDARRQAEEQIRRLARDPQVVPALVHHLRTAK-TPNVRQLAAVLLRK 62
>01_07_0224 - 42121011-42122486
Length = 491
Score = 27.9 bits (59), Expect = 4.3
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 317 ELARNHIDDDGNNQWPEFLQFMF 385
+L ++D G +WP F+QF F
Sbjct: 7 DLGGGGVEDGGGKKWPGFVQFFF 29
>10_02_0195 +
6578384-6578629,6578710-6579300,6586302-6587512,
6587593-6587844,6587932-6588042,6588133-6588214,
6588299-6588382,6588464-6588658
Length = 923
Score = 27.5 bits (58), Expect = 5.7
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +2
Query: 206 LPEIAI*AADSAQRTIVLTLQMDLSQYLRRKVCDVVSELARNH 334
LP I A+ QRT++ L DL +++RR +C+ + E H
Sbjct: 860 LPSIPYSASWFDQRTLI-NLCADLCRFIRRNICNHLGEFHDPH 901
>07_03_0073 -
13063209-13063403,13063489-13063579,13063707-13063736,
13063827-13063937,13064023-13064260,13064366-13064837,
13065054-13065563,13065993-13066481
Length = 711
Score = 27.5 bits (58), Expect = 5.7
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +2
Query: 206 LPEIAI*AADSAQRTIVLTLQMDLSQYLRRKVCDVVSELARNH 334
LP I A+ Q+T++ L +DL +++RR +C+ + E H
Sbjct: 648 LPSIPYSASRFDQKTLI-NLCVDLCRFIRRDICNHLGEFHDPH 689
>01_07_0027 -
40578075-40578437,40578647-40578767,40578852-40578952,
40579176-40579451,40579485-40579805,40581609-40581623,
40581969-40582295,40583287-40583538
Length = 591
Score = 27.5 bits (58), Expect = 5.7
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +3
Query: 15 LLNTLLSTDNDIRSQAEDAYNN 80
LL TLLS D D+R A DA N+
Sbjct: 375 LLETLLSIDPDMRGTATDALNS 396
>01_05_0117 - 18300157-18301106,18301149-18301543,18302592-18302681,
18303723-18303836,18303903-18304046,18316147-18316312,
18316396-18317130,18317219-18317422,18317496-18318177,
18318272-18318528,18318604-18319298,18319345-18319382,
18319847-18319928,18320018-18320112,18320443-18320526,
18320601-18320891,18321521-18321853,18321948-18322150,
18322243-18322399,18322482-18322585,18322675-18322835,
18323511-18323824,18324317-18324589,18324666-18324967,
18325459-18325549,18326140-18326190,18326700-18326768,
18326926-18327017,18327082-18327148,18328582-18328746,
18329027-18329103,18329572-18329766,18330208-18330275,
18331081-18331172,18331399-18331522,18331608-18331705,
18332384-18332997,18333620-18333626
Length = 2892
Score = 27.1 bits (57), Expect = 7.5
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +3
Query: 63 EDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLLRRLF 185
ED+Y+N+P +V+ N + I ++V + +LRR F
Sbjct: 2820 EDSYHNLPPLLEVMQARNPGTHMAILDEVNEYGENVLRRAF 2860
>12_02_0410 +
18701258-18701327,18701398-18701630,18701782-18702639,
18703006-18703865,18704285-18704395,18704486-18704567,
18704643-18704735,18704795-18704989
Length = 833
Score = 26.6 bits (56), Expect = 10.0
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 206 LPEIAI*AADSAQRTIVLTLQMDLSQYLRRKVCDVVSELARNH 334
LP I A+ Q+T++ L DL +++RR +C+ + E H
Sbjct: 770 LPSILYSASRFDQKTLI-NLCADLCRFIRRDICNHLGEFHDPH 811
>10_02_0018 -
4264602-4264796,4265050-4265131,4265217-4265327,
4265415-4265641
Length = 204
Score = 26.6 bits (56), Expect = 10.0
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 206 LPEIAI*AADSAQRTIVLTLQMDLSQYLRRKVCDVVSELARNH 334
LP I A Q+T++ L MDL Q++R +C+ + E H
Sbjct: 141 LPSIPYNAIRFDQKTLI-NLCMDLCQFIRCDICNHLGEFHDPH 182
>03_02_0524 - 9127695-9127991
Length = 98
Score = 26.6 bits (56), Expect = 10.0
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 50 QIPSRGRIQQHSNRNKSSAPSEFNSKC 130
Q+ RGR+ ++APS F+S+C
Sbjct: 44 QVIGRGRVGSGGGGGAAAAPSSFSSRC 70
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,234,169
Number of Sequences: 37544
Number of extensions: 230297
Number of successful extensions: 581
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 568
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 579
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 943260316
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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