Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0146
         (468 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    25   0.54 
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     22   2.9  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   5.0  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   6.6  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    21   8.7  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 24.6 bits (51), Expect = 0.54
 Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
 Frame = -1

Query: 465 FPNTP-GTDVNILXPA--SLMFGSCALAQVNMNCRNSGHWLLPS 343
           FP TP G +V ++     + +  +  + Q    C+  G W LPS
Sbjct: 201 FPATPTGREVALIEQTIGTCVANAVVIEQPTFLCKGDGKWYLPS 244


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +2

Query: 65  GRIQQHSNRNKSSAPSEFNSKCRHCRR 145
           G I+  + + K+  P EF  +C+  R+
Sbjct: 134 GNIEAVTTKEKAKFPQEFFPECKWSRK 160


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -2

Query: 269 FEG*VQLFSEHCLLLKWQFREELKEFC 189
           FE  +Q  S+  +   + FR+  KE C
Sbjct: 467 FENQLQFVSDAVMAFAYAFRDMHKELC 493



 Score = 20.6 bits (41), Expect = 8.7
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +2

Query: 32  FNR**YQIPSRGRIQQHSNRNKSSAPSEFNSKCR 133
           FN   YQI     + Q  +  + + P E +S CR
Sbjct: 610 FNCTQYQIRDHKDVTQCISCRQGTVPDETHSACR 643


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 345 MATTSGLSSYSSCLPVPVR 401
           +A    + S S C+P+PVR
Sbjct: 212 LAKLRNVHSSSFCIPLPVR 230


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -2

Query: 374 VGTQATGCCHRHQ 336
           VG  A GC + HQ
Sbjct: 320 VGNSAVGCWNEHQ 332


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,603
Number of Sequences: 438
Number of extensions: 2413
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12559158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)