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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0145
         (537 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC6G9.11 |syb1||synaptobrevin |Schizosaccharomyces pombe|chr 1...    29   0.33 
SPBC13G1.03c |pex14||peroxisomal membrane anchor protein|Schizos...    29   0.58 
SPBC32F12.08c |duo1||DASH complex subunit Duo1 |Schizosaccharomy...    28   0.77 
SPCC1442.01 |ste6|SPCC1450.17|guanyl-nucleotide exchange factor ...    27   1.3  
SPAC3C7.12 |tip1|noc1|CLIP170 family protein Tip1|Schizosaccharo...    27   1.3  
SPCC417.02 |dad5|hsk3, hos3|DASH complex subunit Dad5|Schizosacc...    27   1.8  
SPBP23A10.04 |apc2||anaphase-promoting complex subunit Apc2 |Sch...    26   3.1  
SPBC800.13 |||histone H4 variant|Schizosaccharomyces pombe|chr 2...    26   3.1  
SPAC458.05 |pik3|vps34|phosphatidylinositol 3-kinase Pik3|Schizo...    26   4.1  
SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces pom...    25   5.4  
SPBC19G7.10c |||topoisomerase associated protein |Schizosaccharo...    25   5.4  
SPBC1A4.05 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||...    25   5.4  
SPAC1834.05 |alg9||mannosyltransferase complex subunit Alg9 |Sch...    25   7.2  
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac...    25   9.5  

>SPAC6G9.11 |syb1||synaptobrevin |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 121

 Score = 29.5 bits (63), Expect = 0.33
 Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 5/63 (7%)
 Frame = +3

Query: 288 PAEPYNLRVYSPNTHSSTDTNSILASIEERLR-----VLETVSAVQAKQTRRLDAIQDKL 452
           PAEP +  V S N  +S+  N   A+I++++      + E +S V +++  RLD++QDK 
Sbjct: 10  PAEP-SAAVRSGNAAASSTPNMKTAAIQQQIDDTVGIMRENISKV-SERGERLDSLQDKT 67

Query: 453 DRV 461
           D +
Sbjct: 68  DNL 70


>SPBC13G1.03c |pex14||peroxisomal membrane anchor
           protein|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 286

 Score = 28.7 bits (61), Expect = 0.58
 Identities = 18/76 (23%), Positives = 36/76 (47%)
 Frame = +3

Query: 309 RVYSPNTHSSTDTNSILASIEERLRVLETVSAVQAKQTRRLDAIQDKLDRVETTLSLKLE 488
           R  S N + + D N++ A   E  ++LE +     K + R +  QD+LD     L   L 
Sbjct: 99  RAPSQNAYEA-DKNALDAKFLEAHKILENLDEQTRKLSERTEKQQDELDIALDDLEETLN 157

Query: 489 RVQLAAEDLEHRLSHV 536
            ++  +E+ +  ++ +
Sbjct: 158 TLKRTSENRDREIARI 173


>SPBC32F12.08c |duo1||DASH complex subunit Duo1 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 166

 Score = 28.3 bits (60), Expect = 0.77
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -1

Query: 315 RHEDCKARPVRCAPNKGTPARPSH 244
           R +D K RP R A +   P+RPSH
Sbjct: 130 RSKDPKVRPARRAASSYVPSRPSH 153


>SPCC1442.01 |ste6|SPCC1450.17|guanyl-nucleotide exchange factor
           Ste6|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 911

 Score = 27.5 bits (58), Expect = 1.3
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = -3

Query: 187 CYCFIGTVFLLFHRYYLTSRRFLSTCFVW 101
           C    G +  + H +Y  S+RFL    +W
Sbjct: 544 CSLNFGKISFISHEFYRVSKRFLDILLIW 572


>SPAC3C7.12 |tip1|noc1|CLIP170 family protein
           Tip1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 461

 Score = 27.5 bits (58), Expect = 1.3
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = +3

Query: 384 VLETVSAVQAKQTRRLDAIQDKLDRVETTLSLKLERVQLAAEDLEHR 524
           VL TV  +Q+  T   D  QD++D +   ++LK ER+Q    +   R
Sbjct: 159 VLATVDQLQSLVTNFNDQ-QDEVDELRERITLKEERIQQMRNEASQR 204


>SPCC417.02 |dad5|hsk3, hos3|DASH complex subunit
           Dad5|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 94

 Score = 27.1 bits (57), Expect = 1.8
 Identities = 20/59 (33%), Positives = 29/59 (49%)
 Frame = +3

Query: 276 ARTSPAEPYNLRVYSPNTHSSTDTNSILASIEERLRVLETVSAVQAKQTRRLDAIQDKL 452
           +RTS + P   ++ S   +   D  S L S    L     V+A+QA+  RRL A+Q  L
Sbjct: 10  SRTSSSSPSPSQMKSFQMNRLVDQLSKLQSNMSHLENHLHVTAIQAEAIRRLGALQASL 68


>SPBP23A10.04 |apc2||anaphase-promoting complex subunit Apc2
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 681

 Score = 26.2 bits (55), Expect = 3.1
 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
 Frame = -2

Query: 281 ARQTKARQHAPATLNIALSIGIFQARRXSPFLLLFY---WHCFFVISP 147
           ARQ + RQ+   T     +  I  A   S ++LLFY     CF  + P
Sbjct: 247 ARQKQQRQYLTETFVKDCTSSILTASSDSSYILLFYVSTIRCFVALDP 294


>SPBC800.13 |||histone H4 variant|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 479

 Score = 26.2 bits (55), Expect = 3.1
 Identities = 21/63 (33%), Positives = 31/63 (49%)
 Frame = +3

Query: 318 SPNTHSSTDTNSILASIEERLRVLETVSAVQAKQTRRLDAIQDKLDRVETTLSLKLERVQ 497
           SP T +S D N  + SIE   R  + +S       RR+  I+D L   E  L   +++VQ
Sbjct: 134 SPGTDTS-DANLTIQSIEAPRRAPQRLSDFFTPDGRRVSNIRDSLIS-EKRLENNIDQVQ 191

Query: 498 LAA 506
            +A
Sbjct: 192 ESA 194


>SPAC458.05 |pik3|vps34|phosphatidylinositol 3-kinase
           Pik3|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 801

 Score = 25.8 bits (54), Expect = 4.1
 Identities = 19/55 (34%), Positives = 30/55 (54%)
 Frame = +3

Query: 363 SIEERLRVLETVSAVQAKQTRRLDAIQDKLDRVETTLSLKLERVQLAAEDLEHRL 527
           S+E RL + ET+SA QAK   +L  I   +     T   K+E +++  ED ++ L
Sbjct: 443 SVEGRL-IRETLSA-QAKFVEKLLRISKSVQSFRGTRLKKIEYLKVLLEDHKYHL 495


>SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 736

 Score = 25.4 bits (53), Expect = 5.4
 Identities = 15/46 (32%), Positives = 27/46 (58%)
 Frame = +3

Query: 369 EERLRVLETVSAVQAKQTRRLDAIQDKLDRVETTLSLKLERVQLAA 506
           EE L  L+T   V+ K+T R+D+  +    + +T+ L  E+++L A
Sbjct: 71  EEHLDTLQTNGLVRLKETIRMDSQSE----ISSTMGLVGEKMELDA 112


>SPBC19G7.10c |||topoisomerase associated protein
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 744

 Score = 25.4 bits (53), Expect = 5.4
 Identities = 18/69 (26%), Positives = 30/69 (43%)
 Frame = +3

Query: 288 PAEPYNLRVYSPNTHSSTDTNSILASIEERLRVLETVSAVQAKQTRRLDAIQDKLDRVET 467
           P EP +      N    +    +L +IE+   +L        K +      Q+++D  +T
Sbjct: 434 PTEPASSNSSLNNFSGFSTKKDVLHAIEKVYDLLLDFEQALRKASTLETTDQEQIDTWKT 493

Query: 468 TLSLKLERV 494
           TLS KLE +
Sbjct: 494 TLSEKLESI 502


>SPBC1A4.05 |||sequence orphan|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 700

 Score = 25.4 bits (53), Expect = 5.4
 Identities = 21/92 (22%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
 Frame = +3

Query: 273 LARTSPAEPYNLRVYSPNTHSSTDTNSILASIEERLRVLE-TVSAVQAKQ---TRRLDAI 440
           L      E  NL + + N     D +    ++++  R L+  V  ++ K+   T +++ +
Sbjct: 468 LTNADNLEKENLLLVNNNAFKVDDRSVSSVALDDHNRQLQMNVEELEGKKADLTSKINRL 527

Query: 441 QDKLDRVETTLSLKLERV---QLAAEDLEHRL 527
                ++ TT SL  ++V   QLA +++E R+
Sbjct: 528 DKDFVKLNTTYSLLTDQVKTKQLALQEIESRV 559


>SPAC1834.05 |alg9||mannosyltransferase complex subunit Alg9
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 577

 Score = 25.0 bits (52), Expect = 7.2
 Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
 Frame = +3

Query: 237 VKCGWGVLACLCLARTSPAEPYN--LRVYSPNTHSSTDTN 350
           V C + ++ CL +AR    + YN  + +Y   +   TD N
Sbjct: 378 VLCVYAIIGCLSIARILAIQNYNAPMIIYPAISFLETDNN 417


>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
           Spp42|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 2363

 Score = 24.6 bits (51), Expect = 9.5
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +1

Query: 73  VARVYRERVPTRSTCSETVAKLNNTGEITK 162
           VA   RER+   +T  +TVAK  N G +T+
Sbjct: 776 VAHFNRERIRRGATVDKTVAK-KNLGRLTR 804


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,060,738
Number of Sequences: 5004
Number of extensions: 40355
Number of successful extensions: 116
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 116
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 222442660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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