BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0145 (537 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 23 1.5 EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 21 6.0 DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 21 6.0 DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 21 8.0 >AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein protein. Length = 1308 Score = 23.4 bits (48), Expect = 1.5 Identities = 13/29 (44%), Positives = 14/29 (48%) Frame = +1 Query: 109 STCSETVAKLNNTGEITKKQCQ*NNSRXG 195 STCS VAK N +T NNS G Sbjct: 517 STCSLAVAKQQNQVPLTSSSNVNNNSGNG 545 >EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. Length = 570 Score = 21.4 bits (43), Expect = 6.0 Identities = 13/38 (34%), Positives = 18/38 (47%) Frame = +1 Query: 28 HSKQSRCGMLRQPHLVARVYRERVPTRSTCSETVAKLN 141 HSK SR + R + ++ + R S ETV LN Sbjct: 490 HSKSSRINIERMKQVYQQLNKYRGNGVSLKGETVGLLN 527 >DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein protein. Length = 430 Score = 21.4 bits (43), Expect = 6.0 Identities = 10/37 (27%), Positives = 16/37 (43%) Frame = -1 Query: 375 ALQCWLECYLYP*SCAYLVSRHEDCKARPVRCAPNKG 265 A+ CW Y +V+RH++ P N+G Sbjct: 337 AVGCWNSLLPYSPENQAVVARHDEAMIFPADVKINRG 373 >DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor protein. Length = 459 Score = 21.0 bits (42), Expect = 8.0 Identities = 13/52 (25%), Positives = 22/52 (42%) Frame = -2 Query: 161 FVISPVLFNFATVSEHVLRVGTRSRYTRATRCGCRSMPQRLCFECRHASSVR 6 + ++ L+ F+T +L ++Y A + CR P SSVR Sbjct: 298 YPLTGCLYYFSTTINPILYNVMSAKYRNAFKETCRCSPSNPSITRTGLSSVR 349 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 140,173 Number of Sequences: 438 Number of extensions: 3003 Number of successful extensions: 4 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4 length of database: 146,343 effective HSP length: 54 effective length of database: 122,691 effective search space used: 15213684 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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