Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0145
(537 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g43880.1 68414.m05055 hypothetical protein low similarity to ... 31 0.49
At1g79670.2 68414.m09292 wall-associated kinase, putative simila... 30 1.1
At1g79670.1 68414.m09291 wall-associated kinase, putative simila... 30 1.1
At5g67470.1 68418.m08507 formin homology 2 domain-containing pro... 29 2.0
At5g16730.1 68418.m01959 expressed protein weak similarity to mi... 29 2.0
At5g62000.3 68418.m07784 transcriptional factor B3 family protei... 29 2.6
At5g62000.2 68418.m07783 transcriptional factor B3 family protei... 29 2.6
At5g62000.1 68418.m07782 transcriptional factor B3 family protei... 29 2.6
At5g66030.2 68418.m08315 Golgi-localized GRIP domain-containing ... 28 3.4
At5g66030.1 68418.m08314 Golgi-localized GRIP domain-containing ... 28 3.4
At3g23480.1 68416.m02958 cyclopropane fatty acid synthase-relate... 28 4.5
At4g39150.1 68417.m05545 DNAJ heat shock N-terminal domain-conta... 27 6.0
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 27 6.0
At1g12790.1 68414.m01485 expressed protein 27 6.0
At5g28810.1 68418.m03542 hypothetical protein 27 7.9
At3g19700.1 68416.m02495 leucine-rich repeat transmembrane prote... 27 7.9
At2g20010.1 68415.m02339 expressed protein 27 7.9
>At1g43880.1 68414.m05055 hypothetical protein low similarity to
protective antigen [Streptococcus pyogenes] GI:8996050,
fibrinogen-binding protein [Streptococcus equi]
GI:3093478
Length = 409
Score = 31.1 bits (67), Expect = 0.49
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Frame = +3
Query: 282 TSPAEPYNLRVYSPNTHSSTDTNSILASIEERLRVLE--TVSAVQAKQTRRLDAIQDKLD 455
TS A+ V+ + + +LA ++E+ + TV VQA + A+ D++
Sbjct: 257 TSTAQGAKKAVHDVKVELAAAYSKLLAGVKEKWVAKKEYTVLEVQAAEVETNLALIDQIT 316
Query: 456 RVETTLSLKLERVQLAAEDLEHR 524
+V L+++ R+Q +DLE R
Sbjct: 317 KVAIDLTVEKPRLQAELDDLEAR 339
>At1g79670.2 68414.m09292 wall-associated kinase, putative similar
to wall-associated kinase 4 GI:3355308 from [Arabidopsis
thaliana]; isoform contains non-consensus AT-acceptor
splice site.
Length = 714
Score = 29.9 bits (64), Expect = 1.1
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Frame = +3
Query: 348 NSILASIEERLR---VLETVSAVQAKQTRRLDAIQDKLDRVETTLSLKLERVQLAAEDLE 518
N +L ++ R++ LE V AV AK RR +++ K +S++LER++ + EDLE
Sbjct: 607 NRVLDIVDSRIKEGCTLEQVLAV-AKLARRCLSLKGKKRPNMREVSVELERIRSSPEDLE 665
>At1g79670.1 68414.m09291 wall-associated kinase, putative similar
to wall-associated kinase 4 GI:3355308 from [Arabidopsis
thaliana]; isoform contains non-consensus AT-acceptor
splice site.
Length = 751
Score = 29.9 bits (64), Expect = 1.1
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Frame = +3
Query: 348 NSILASIEERLR---VLETVSAVQAKQTRRLDAIQDKLDRVETTLSLKLERVQLAAEDLE 518
N +L ++ R++ LE V AV AK RR +++ K +S++LER++ + EDLE
Sbjct: 644 NRVLDIVDSRIKEGCTLEQVLAV-AKLARRCLSLKGKKRPNMREVSVELERIRSSPEDLE 702
>At5g67470.1 68418.m08507 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 899
Score = 29.1 bits (62), Expect = 2.0
Identities = 20/80 (25%), Positives = 33/80 (41%)
Frame = +3
Query: 282 TSPAEPYNLRVYSPNTHSSTDTNSILASIEERLRVLETVSAVQAKQTRRLDAIQDKLDRV 461
TSP+ + SP T + + NS+ A E+ +T + + D ++ DR
Sbjct: 418 TSPSRKQAFKTPSPKTKAVEEVNSVSAGSLEKSGDGDTDPSKPKLKPLHWDKVRASSDRA 477
Query: 462 ETTLSLKLERVQLAAEDLEH 521
LK QL + +EH
Sbjct: 478 TVWDQLKSSSFQLNEDRMEH 497
>At5g16730.1 68418.m01959 expressed protein weak similarity to
microtubule binding protein D-CLIP-190 [Drosophila
melanogaster] GI:2773363, SMC2-like condensin
[Arabidopsis thaliana] GI:14279543
Length = 853
Score = 29.1 bits (62), Expect = 2.0
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +3
Query: 342 DTNSILASIEERLRVLETVSAVQAKQTRRLDAIQDKLDRVETTLSLKLERVQLAAEDLE 518
DT + + ++ER+ LET AKQ L+ + +L VE +S + V+ +LE
Sbjct: 363 DTETEITDLKERIVTLET---TVAKQKEDLEVSEQRLGSVEEEVSKNEKEVEKLKSELE 418
>At5g62000.3 68418.m07784 transcriptional factor B3 family protein /
auxin-responsive factor, putative (ARF1) contains Pfam
profile: PF02362 B3 DNA binding domain; identical to
cDNA ARF1 (auxin response factor) binding protein
GI:2245393
Length = 859
Score = 28.7 bits (61), Expect = 2.6
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = -3
Query: 352 LFVSVELCVFGE*TRRL*GSAGEVRAKQRHASTPQPHLTSPCL*GYSRHVDXAXSCYCFI 173
+FVS + V G+ L G GE+R R A Q ++ S + +S H+ + + I
Sbjct: 235 VFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAI 294
Query: 172 --GTVFLLFHRYYLTSRRFL 119
GT+F ++++ + F+
Sbjct: 295 STGTMFTVYYKPRTSPSEFI 314
>At5g62000.2 68418.m07783 transcriptional factor B3 family protein /
auxin-responsive factor, putative (ARF1) contains Pfam
profile: PF02362 B3 DNA binding domain; identical to
cDNA ARF1 (auxin response factor) binding protein
GI:2245393
Length = 859
Score = 28.7 bits (61), Expect = 2.6
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = -3
Query: 352 LFVSVELCVFGE*TRRL*GSAGEVRAKQRHASTPQPHLTSPCL*GYSRHVDXAXSCYCFI 173
+FVS + V G+ L G GE+R R A Q ++ S + +S H+ + + I
Sbjct: 235 VFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAI 294
Query: 172 --GTVFLLFHRYYLTSRRFL 119
GT+F ++++ + F+
Sbjct: 295 STGTMFTVYYKPRTSPSEFI 314
>At5g62000.1 68418.m07782 transcriptional factor B3 family protein /
auxin-responsive factor, putative (ARF1) contains Pfam
profile: PF02362 B3 DNA binding domain; identical to
cDNA ARF1 (auxin response factor) binding protein
GI:2245393
Length = 859
Score = 28.7 bits (61), Expect = 2.6
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = -3
Query: 352 LFVSVELCVFGE*TRRL*GSAGEVRAKQRHASTPQPHLTSPCL*GYSRHVDXAXSCYCFI 173
+FVS + V G+ L G GE+R R A Q ++ S + +S H+ + + I
Sbjct: 235 VFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAI 294
Query: 172 --GTVFLLFHRYYLTSRRFL 119
GT+F ++++ + F+
Sbjct: 295 STGTMFTVYYKPRTSPSEFI 314
>At5g66030.2 68418.m08315 Golgi-localized GRIP domain-containing
protein contains Pfam profile PF01465: GRIP domain;
supporting cDNA gi|20303028|gb|AF499634.1|
Length = 765
Score = 28.3 bits (60), Expect = 3.4
Identities = 15/61 (24%), Positives = 34/61 (55%)
Frame = +3
Query: 354 ILASIEERLRVLETVSAVQAKQTRRLDAIQDKLDRVETTLSLKLERVQLAAEDLEHRLSH 533
++ ++ ER + ET+S++Q + + K+ +E + + R++ AAE L+ L+H
Sbjct: 300 VVDALSERDKAAETISSLQVLLAEK----ESKIAEMEAAATGEAARLRAAAETLKGELAH 355
Query: 534 V 536
+
Sbjct: 356 L 356
>At5g66030.1 68418.m08314 Golgi-localized GRIP domain-containing
protein contains Pfam profile PF01465: GRIP domain;
supporting cDNA gi|20303028|gb|AF499634.1|
Length = 788
Score = 28.3 bits (60), Expect = 3.4
Identities = 15/61 (24%), Positives = 34/61 (55%)
Frame = +3
Query: 354 ILASIEERLRVLETVSAVQAKQTRRLDAIQDKLDRVETTLSLKLERVQLAAEDLEHRLSH 533
++ ++ ER + ET+S++Q + + K+ +E + + R++ AAE L+ L+H
Sbjct: 300 VVDALSERDKAAETISSLQVLLAEK----ESKIAEMEAAATGEAARLRAAAETLKGELAH 355
Query: 534 V 536
+
Sbjct: 356 L 356
>At3g23480.1 68416.m02958 cyclopropane fatty acid synthase-related
similar to cyclopropane synthase [Sterculia foetida]
GI:21069167
Length = 513
Score = 27.9 bits (59), Expect = 4.5
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 213 EYPYRQGDVKCGWGVLACLCLART 284
E PY ++ CGWG LA + RT
Sbjct: 217 EEPYEVLEIGCGWGTLAIEVVKRT 240
>At4g39150.1 68417.m05545 DNAJ heat shock N-terminal
domain-containing protein similar to SP|P39101 CAJ1
protein, Saccharomyces cerevisiae, PIR2:S48085; contains
Pfam profile PF00226 DnaJ domain
Length = 345
Score = 27.5 bits (58), Expect = 6.0
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +3
Query: 360 ASIEERLRVLETVSAVQAKQTRRLDAIQ-DKLDRVETTLSLKLE 488
ASI+ L E Q Q ++ AIQ D++D++ TTL +KLE
Sbjct: 109 ASIDAELESYEPEIRKQMLQ-EKIKAIQKDRVDKLVTTLKIKLE 151
>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 727
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -1
Query: 333 CAYLVSRHEDCKARPVRCAPNKGTPAR-PSHT*HRPVYRDIP 211
CA ++SR DC ++ TP++ PS RPV++ P
Sbjct: 370 CAVVISRPVDCSKDKCAGGSSQATPSKSPSPVPTRPVHKPQP 411
>At1g12790.1 68414.m01485 expressed protein
Length = 250
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +1
Query: 241 SVAGACWRAFVWRAPHRPSLTIFVSTHQIRTALRIQ-IAF*PALKSGC 381
+VAG C + W+ PSL F+S + R+ ++ P L C
Sbjct: 25 NVAGVCIMSNAWKVEQEPSLINFISAFLSANSFRLNFVSIPPDLIFNC 72
>At5g28810.1 68418.m03542 hypothetical protein
Length = 560
Score = 27.1 bits (57), Expect = 7.9
Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +3
Query: 291 AEPYNLRVYSPNTHSSTDTNSILASIEERLRVLE-TVSAVQAKQTRRLDAIQDKLDRVET 467
AE + + + H + + + L I L + TVS + + RLD +Q K+ +E
Sbjct: 308 AEVSHKKQRTGKAHVNEEEKTSLLDIWNMLEKMNVTVSDIDKNASSRLDGLQKKVTCLEA 367
Query: 468 TLSLKLERVQ 497
++ + E V+
Sbjct: 368 SVKTRFEAVE 377
>At3g19700.1 68416.m02495 leucine-rich repeat transmembrane protein
kinase, putative similar to leucine-rich receptor-like
protein kinase GB:AAC36318 from [Malus domestica];
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 991
Score = 27.1 bits (57), Expect = 7.9
Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = +3
Query: 225 RQGDVKCGWGVLACLCLARTSPAEPYNLRVYSPNTHSSTDTNSILASIEERLRVLE--TV 398
R+G+ + GW V L L E + + P H +++IL E R R+ +
Sbjct: 777 RRGEQEIGWRVRQALALGAAKGLEYLHHGLDRPVIHRDVKSSNILLDEEWRPRIADFGLA 836
Query: 399 SAVQAKQTRR 428
+QA +R
Sbjct: 837 KIIQADSVQR 846
>At2g20010.1 68415.m02339 expressed protein
Length = 834
Score = 27.1 bits (57), Expect = 7.9
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +3
Query: 297 PYNLRVYSPNTHSSTDTNSILASIEERLRVLETV 398
P NLR+Y S D N L +EE VLE +
Sbjct: 136 PLNLRIYQMLLESCFDVNDELLIVEEVDEVLELI 169
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,844,880
Number of Sequences: 28952
Number of extensions: 212596
Number of successful extensions: 566
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 566
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 993966856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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