Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0143
(612 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC117673-1|AAI17674.1| 905|Homo sapiens CAPRIN2 protein protein. 60 6e-09
BC117672-1|AAI17673.1| 960|Homo sapiens CAPRIN2 protein protein. 60 6e-09
AY074491-1|AAL71550.1| 278|Homo sapiens EEG1S protein. 60 6e-09
AY074490-1|AAL71549.1| 1077|Homo sapiens EEG1L protein. 60 6e-09
BC001731-1|AAH01731.2| 709|Homo sapiens cell cycle associated p... 59 1e-08
Z48042-1|CAA88096.1| 649|Homo sapiens GPI-anchored protein p137... 58 3e-08
BX537569-1|CAD97786.1| 173|Homo sapiens hypothetical protein pr... 58 3e-08
D30658-1|BAA06338.1| 739|Homo sapiens glycyl tRNA synthetase pr... 29 9.8
BC007755-1|AAH07755.1| 739|Homo sapiens glycyl-tRNA synthetase ... 29 9.8
BC007722-1|AAH07722.1| 739|Homo sapiens glycyl-tRNA synthetase ... 29 9.8
>BC117673-1|AAI17674.1| 905|Homo sapiens CAPRIN2 protein protein.
Length = 905
Score = 60.1 bits (139), Expect = 6e-09
Identities = 29/67 (43%), Positives = 42/67 (62%)
Frame = +2
Query: 56 SEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKYD 235
S + S+ +T I + ++HKIRN+EK+K KL Y+D K+G+ LN DQ AV KY+
Sbjct: 109 SSAASPSQAYETYIENGLICLKHKIRNIEKKKLKLEDYKDRLKSGEHLNPDQLEAVEKYE 168
Query: 236 EVAQTLD 256
EV L+
Sbjct: 169 EVLHNLE 175
>BC117672-1|AAI17673.1| 960|Homo sapiens CAPRIN2 protein protein.
Length = 960
Score = 60.1 bits (139), Expect = 6e-09
Identities = 29/67 (43%), Positives = 42/67 (62%)
Frame = +2
Query: 56 SEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKYD 235
S + S+ +T I + ++HKIRN+EK+K KL Y+D K+G+ LN DQ AV KY+
Sbjct: 109 SSAASPSQAYETYIENGLICLKHKIRNIEKKKLKLEDYKDRLKSGEHLNPDQLEAVEKYE 168
Query: 236 EVAQTLD 256
EV L+
Sbjct: 169 EVLHNLE 175
>AY074491-1|AAL71550.1| 278|Homo sapiens EEG1S protein.
Length = 278
Score = 60.1 bits (139), Expect = 6e-09
Identities = 29/67 (43%), Positives = 42/67 (62%)
Frame = +2
Query: 56 SEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKYD 235
S + S+ +T I + ++HKIRN+EK+K KL Y+D K+G+ LN DQ AV KY+
Sbjct: 109 SSAASPSQAYETYIENGLICLKHKIRNIEKKKLKLEDYKDRLKSGEHLNPDQLEAVEKYE 168
Query: 236 EVAQTLD 256
EV L+
Sbjct: 169 EVLHNLE 175
>AY074490-1|AAL71549.1| 1077|Homo sapiens EEG1L protein.
Length = 1077
Score = 60.1 bits (139), Expect = 6e-09
Identities = 29/67 (43%), Positives = 42/67 (62%)
Frame = +2
Query: 56 SEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKYD 235
S + S+ +T I + ++HKIRN+EK+K KL Y+D K+G+ LN DQ AV KY+
Sbjct: 109 SSAASPSQAYETYIENGLICLKHKIRNIEKKKLKLEDYKDRLKSGEHLNPDQLEAVEKYE 168
Query: 236 EVAQTLD 256
EV L+
Sbjct: 169 EVLHNLE 175
>BC001731-1|AAH01731.2| 709|Homo sapiens cell cycle associated
protein 1 protein.
Length = 709
Score = 59.3 bits (137), Expect = 1e-08
Identities = 30/74 (40%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Frame = +2
Query: 41 AANAKSEKPASSED--KDTPIRQIMTIIEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQK 214
AA S+ PA+ + ++QI+ +I+ K+RNLEK+K KL Y++ G+ LN DQ
Sbjct: 34 AAAPASQHPATGTGAVQTEAMKQILGVIDKKLRNLEKKKGKLDDYQERMNKGERLNQDQL 93
Query: 215 VAVAKYDEVAQTLD 256
AV+KY EV L+
Sbjct: 94 DAVSKYQEVTNNLE 107
Score = 43.6 bits (98), Expect = 6e-04
Identities = 24/83 (28%), Positives = 40/83 (48%)
Frame = +1
Query: 256 FARDLSKQVTAIAISSXXXXXXXXXXXXWVRYAAETNKIKEVLLILDCLMQMGSADARTD 435
FA++L + A++ +R AE ++K VL + L ++G + RTD
Sbjct: 108 FAKELQRSFMALSQDIQKTIKKTARREQLMREEAEQKRLKTVLELQYVLDKLGDDEVRTD 167
Query: 436 FINGTNGAAKLTEDXLKILDDLY 504
G NG L+E+ L +LD+ Y
Sbjct: 168 LKQGLNGVPILSEEELSLLDEFY 190
>Z48042-1|CAA88096.1| 649|Homo sapiens GPI-anchored protein p137
protein.
Length = 649
Score = 57.6 bits (133), Expect = 3e-08
Identities = 25/54 (46%), Positives = 37/54 (68%)
Frame = +2
Query: 95 IRQIMTIIEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKYDEVAQTLD 256
++QI+ +I+ K+RNLEK+K KL Y++ G+ LN DQ AV+KY EV L+
Sbjct: 1 MKQILGVIDKKLRNLEKKKGKLDDYQERMNKGERLNQDQLDAVSKYQEVTNNLE 54
Score = 43.6 bits (98), Expect = 6e-04
Identities = 24/83 (28%), Positives = 40/83 (48%)
Frame = +1
Query: 256 FARDLSKQVTAIAISSXXXXXXXXXXXXWVRYAAETNKIKEVLLILDCLMQMGSADARTD 435
FA++L + A++ +R AE ++K VL + L ++G + RTD
Sbjct: 55 FAKELQRSFMALSQDIQKTIKKTARREQLMREEAEQKRLKTVLELQYVLDKLGDDEVRTD 114
Query: 436 FINGTNGAAKLTEDXLKILDDLY 504
G NG L+E+ L +LD+ Y
Sbjct: 115 LKQGLNGVPILSEEELSLLDEFY 137
>BX537569-1|CAD97786.1| 173|Homo sapiens hypothetical protein
protein.
Length = 173
Score = 57.6 bits (133), Expect = 3e-08
Identities = 28/67 (41%), Positives = 41/67 (61%)
Frame = +2
Query: 56 SEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKYD 235
S + S+ + I + ++HKIRN+EK+K KL Y+D K+G+ LN DQ AV KY+
Sbjct: 74 SSAASPSQAYEAYIENGLICLKHKIRNIEKKKLKLEDYKDHLKSGEHLNPDQLEAVEKYE 133
Query: 236 EVAQTLD 256
EV L+
Sbjct: 134 EVLHNLE 140
>D30658-1|BAA06338.1| 739|Homo sapiens glycyl tRNA synthetase
protein.
Length = 739
Score = 29.5 bits (63), Expect = 9.8
Identities = 22/75 (29%), Positives = 37/75 (49%)
Frame = +2
Query: 5 SKKSCCL*RMPSAANAKSEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTSYRDLQK 184
S SC +P+AA+ S A +E+ P+R + +R L++ K+ D+ K
Sbjct: 37 SAASCAPISLPAAASRSSMDGAGAEEVLAPLRLAVRQQGDLVRKLKEDKAPQV---DVDK 93
Query: 185 AGKELNSDQKVAVAK 229
A EL + ++V AK
Sbjct: 94 AVAELKARKRVLEAK 108
>BC007755-1|AAH07755.1| 739|Homo sapiens glycyl-tRNA synthetase
protein.
Length = 739
Score = 29.5 bits (63), Expect = 9.8
Identities = 22/75 (29%), Positives = 37/75 (49%)
Frame = +2
Query: 5 SKKSCCL*RMPSAANAKSEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTSYRDLQK 184
S SC +P+AA+ S A +E+ P+R + +R L++ K+ D+ K
Sbjct: 37 SAASCAPISLPAAASRSSMDGAGAEEVLAPLRLAVRQQGDLVRKLKEDKAPQV---DVDK 93
Query: 185 AGKELNSDQKVAVAK 229
A EL + ++V AK
Sbjct: 94 AVAELKARKRVLEAK 108
>BC007722-1|AAH07722.1| 739|Homo sapiens glycyl-tRNA synthetase
protein.
Length = 739
Score = 29.5 bits (63), Expect = 9.8
Identities = 22/75 (29%), Positives = 37/75 (49%)
Frame = +2
Query: 5 SKKSCCL*RMPSAANAKSEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTSYRDLQK 184
S SC +P+AA+ S A +E+ P+R + +R L++ K+ D+ K
Sbjct: 37 SAASCAPISLPAAASRSSMDGAGAEEVLAPLRLAVRQQGDLVRKLKEDKAPQV---DVDK 93
Query: 185 AGKELNSDQKVAVAK 229
A EL + ++V AK
Sbjct: 94 AVAELKARKRVLEAK 108
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,345,119
Number of Sequences: 237096
Number of extensions: 1442553
Number of successful extensions: 2357
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2355
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6522878360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -