Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0142
         (501 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.2  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    22   2.7  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   4.7  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   6.2  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   8.2  
EF532798-1|ABQ08060.1|   50|Tribolium castaneum acetylcholineste...    21   8.2  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   8.2  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   8.2  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +1

Query: 106  NQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEA 228
            N+I  + W +  D  G     AYHGD  +  E I    ++A
Sbjct: 911  NRIRNQRWIVNRDTSGATGPFAYHGDQWVGFEDIKSVRDKA 951


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +1

Query: 346 VRAPATTGAKGHYTE 390
           V APATTG  G +T+
Sbjct: 263 VGAPATTGIAGPFTQ 277


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 482 PSVSVGIPGGNHTIPLP 432
           PS+S G+ GG   +P+P
Sbjct: 81  PSLSSGLGGGLSGMPMP 97


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 241 YVPRASSSTWSPA 279
           Y   A+SS WSPA
Sbjct: 210 YTNSANSSIWSPA 222


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = -2

Query: 194 CKSESPW*APVGSMPC 147
           C +E PW    G  PC
Sbjct: 351 CVNERPWSLYCGEPPC 366



 Score = 20.6 bits (41), Expect = 8.2
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +3

Query: 285 DYVALDLSDRSTVRTTSYXDSTGAGNNWGQGTL 383
           D V L+   +   +TT++ + T   + WG+ TL
Sbjct: 402 DEVNLECWAQHLQKTTTFMNYTDLHDLWGEFTL 434


>EF532798-1|ABQ08060.1|   50|Tribolium castaneum
           acetylcholinesterase protein.
          Length = 50

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +2

Query: 257 PRRLGARHHG 286
           P+RL  RHHG
Sbjct: 21  PQRLRIRHHG 30


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +2

Query: 428 RKEAESCDCLQGF 466
           RK AE C  LQGF
Sbjct: 240 RKTAEMCYKLQGF 252


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +1

Query: 40  IYSSHK*NKMREIVHIQAGQCGNQIGAKFWEI 135
           I +  + N+++  V I    C N   A+F+E+
Sbjct: 283 IEAKRRDNEIKMFVKIVDASCRNFTAARFFEL 314


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,104
Number of Sequences: 336
Number of extensions: 2519
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11839801
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)