Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0142
(501 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 164 3e-41
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 159 1e-39
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 154 3e-38
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 136 1e-32
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 66 2e-11
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 66 2e-11
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 2e-11
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 65 4e-11
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 64 6e-11
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 64 8e-11
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 1e-10
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 4e-10
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 59 2e-09
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 4e-09
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 47 8e-06
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 1e-05
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 4e-05
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 36 0.025
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 32 0.23
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.31
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 31 0.40
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_31090| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 164 bits (399), Expect = 3e-41
Identities = 90/136 (66%), Positives = 97/136 (71%), Gaps = 5/136 (3%)
Frame = +1
Query: 40 IYSSHK*NKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYY 219
+YSS KMREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYY
Sbjct: 205 VYSSKLLFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYY 264
Query: 220 NEASGGKYVPRASSSTWSPAPWTMSLWTFRTDLPSGQLRXPTVRAPATTG-----AKGHY 384
NEA+GGKYVPRA P TM + R+ P GQ+ P +G AKGHY
Sbjct: 265 NEATGGKYVPRAVLVDLEPG--TMD--SVRSG-PFGQIFRPDNFVFGQSGAGNNWAKGHY 319
Query: 385 TEGAELVDSV*HVVSK 432
TEGAELVDSV VV K
Sbjct: 320 TEGAELVDSVLDVVRK 335
Score = 66.9 bits (156), Expect = 9e-12
Identities = 36/65 (55%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Frame = +2
Query: 293 RSGPFGQIYRPDNFVXRQYGRRQQLGPRDTTR--RVLNSSIQXNTSFRKEAESCDCLQGF 466
RSGPFGQI+RPDNFV Q G T +++S + RKEAESCDCLQGF
Sbjct: 290 RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV---VRKEAESCDCLQGF 346
Query: 467 QLTHS 481
QLTHS
Sbjct: 347 QLTHS 351
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 159 bits (386), Expect = 1e-39
Identities = 86/127 (67%), Positives = 92/127 (72%), Gaps = 5/127 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 247 PRASSSTWSPAPWTMSLWTFRTDLPSGQLRXPTVRAPATTG-----AKGHYTEGAELVDS 411
PRA P TM + R+ P GQ+ P +G AKGHYTEGAELVDS
Sbjct: 61 PRAILVDLEPG--TMD--SVRSG-PFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDS 115
Query: 412 V*HVVSK 432
V VV K
Sbjct: 116 VLDVVRK 122
Score = 66.9 bits (156), Expect = 9e-12
Identities = 36/65 (55%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Frame = +2
Query: 293 RSGPFGQIYRPDNFVXRQYGRRQQLGPRDTTR--RVLNSSIQXNTSFRKEAESCDCLQGF 466
RSGPFGQI+RPDNFV Q G T +++S + RKEAESCDCLQGF
Sbjct: 77 RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV---VRKEAESCDCLQGF 133
Query: 467 QLTHS 481
QLTHS
Sbjct: 134 QLTHS 138
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 154 bits (374), Expect = 3e-38
Identities = 84/127 (66%), Positives = 92/127 (72%), Gaps = 5/127 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREIV +QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 247 PRASSSTWSPAPWTMSLWTFRTDLPSGQLRXPTVRAPATTG-----AKGHYTEGAELVDS 411
PR S P TM + R+ P GQ+ P +G AKGHYTEGAEL+DS
Sbjct: 61 PR--SVLIDLEPGTMD--SVRSG-PFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDS 115
Query: 412 V*HVVSK 432
V VV K
Sbjct: 116 VLDVVRK 122
Score = 66.5 bits (155), Expect = 1e-11
Identities = 35/65 (53%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Frame = +2
Query: 293 RSGPFGQIYRPDNFVXRQYGRRQQLGPRDTTR--RVLNSSIQXNTSFRKEAESCDCLQGF 466
RSGPFGQI+RPDNFV Q G T +++S + RKEAESCDC+QGF
Sbjct: 77 RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLDV---VRKEAESCDCIQGF 133
Query: 467 QLTHS 481
QLTHS
Sbjct: 134 QLTHS 138
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 136 bits (329), Expect = 1e-32
Identities = 59/63 (93%), Positives = 61/63 (96%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 247 PRA 255
PRA
Sbjct: 61 PRA 63
Score = 37.1 bits (82), Expect = 0.008
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +2
Query: 293 RSGPFGQIYRPDNFVXRQYGRRQ 361
RSGPFGQI+RPDNFV + R+
Sbjct: 77 RSGPFGQIFRPDNFVFECFAIRK 99
Score = 27.9 bits (59), Expect = 5.0
Identities = 14/16 (87%), Positives = 14/16 (87%), Gaps = 1/16 (6%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDYV 293
PR ILVDLEPGTMD V
Sbjct: 61 PRAILVDLEPGTMDSV 76
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 66.1 bits (154), Expect = 2e-11
Identities = 35/65 (53%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Frame = +2
Query: 293 RSGPFGQIYRPDNFVXRQYGRRQQLGPRDTTR--RVLNSSIQXNTSFRKEAESCDCLQGF 466
RSGPFGQI+RPDNFV Q G T +++S + RKEAESCDC+QGF
Sbjct: 22 RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV---VRKEAESCDCIQGF 78
Query: 467 QLTHS 481
QLTHS
Sbjct: 79 QLTHS 83
Score = 36.7 bits (81), Expect = 0.011
Identities = 20/44 (45%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDYVALDLSDRSTVRTTSYXDSTGAGNNWGQG 377
PR +LVDLEPGTMD V + +GAGNNW +G
Sbjct: 6 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 49
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 66.1 bits (154), Expect = 2e-11
Identities = 44/119 (36%), Positives = 56/119 (47%), Gaps = 3/119 (2%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 240
MRE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 241 YVPRASSSTWSPAPW-TMSLWTFRTDLPSGQLRXPTVRAPATTGAKGHYTEGAELVDSV 414
+VPRA P + T+R QL A A A+GHYT G E+VD V
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDA-ANNYARGHYTVGKEIVDLV 118
Score = 64.1 bits (149), Expect = 6e-11
Identities = 43/118 (36%), Positives = 55/118 (46%), Gaps = 3/118 (2%)
Frame = +1
Query: 70 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 243
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 494
Query: 244 VPRASSSTWSPAPW-TMSLWTFRTDLPSGQLRXPTVRAPATTGAKGHYTEGAELVDSV 414
VPRA P + T+R QL A A A+GHYT G E+VD V
Sbjct: 495 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDA-ANNYARGHYTVGKEIVDLV 551
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 65.7 bits (153), Expect = 2e-11
Identities = 41/119 (34%), Positives = 57/119 (47%), Gaps = 3/119 (2%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 240
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 241 YVPRASSSTWSPAPW-TMSLWTFRTDLPSGQLRXPTVRAPATTGAKGHYTEGAELVDSV 414
+VPRA P + T+R QL A A A+GHYT G E++D+V
Sbjct: 61 HVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDA-ANNYARGHYTVGKEMIDTV 118
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 64.9 bits (151), Expect = 4e-11
Identities = 43/119 (36%), Positives = 56/119 (47%), Gaps = 3/119 (2%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 240
+RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 241 YVPRASSSTWSPAPW-TMSLWTFRTDLPSGQLRXPTVRAPATTGAKGHYTEGAELVDSV 414
+VPRA P + T+R QL A A A+GHYT G EL+D V
Sbjct: 646 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDA-ANNYARGHYTVGKELIDLV 703
Score = 63.3 bits (147), Expect = 1e-10
Identities = 42/118 (35%), Positives = 55/118 (46%), Gaps = 3/118 (2%)
Frame = +1
Query: 70 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 243
RE + + GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 66 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 125
Query: 244 VPRASSSTWSPAPW-TMSLWTFRTDLPSGQLRXPTVRAPATTGAKGHYTEGAELVDSV 414
VPRA P + T+R QL A A A+GHYT G E+VD V
Sbjct: 126 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDA-ANNYARGHYTIGKEIVDLV 182
Score = 53.2 bits (122), Expect = 1e-07
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +1
Query: 70 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 243
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 244 VPRA 255
VPRA
Sbjct: 574 VPRA 577
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 64.1 bits (149), Expect = 6e-11
Identities = 42/119 (35%), Positives = 56/119 (47%), Gaps = 3/119 (2%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 240
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 241 YVPRASSSTWSPAPW-TMSLWTFRTDLPSGQLRXPTVRAPATTGAKGHYTEGAELVDSV 414
+VPRA P + T+R QL A A A+GHYT G E++D V
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDA-ANNYARGHYTIGKEIIDLV 118
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 63.7 bits (148), Expect = 8e-11
Identities = 42/118 (35%), Positives = 55/118 (46%), Gaps = 3/118 (2%)
Frame = +1
Query: 70 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 243
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 244 VPRASSSTWSPAPW-TMSLWTFRTDLPSGQLRXPTVRAPATTGAKGHYTEGAELVDSV 414
VPRA P + T+R QL A A A+GHYT G E++D V
Sbjct: 61 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDA-ANNYARGHYTVGKEIIDLV 117
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 63.3 bits (147), Expect = 1e-10
Identities = 40/118 (33%), Positives = 56/118 (47%), Gaps = 3/118 (2%)
Frame = +1
Query: 70 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 243
RE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK+
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 865
Query: 244 VPRASSSTWSPAPW-TMSLWTFRTDLPSGQLRXPTVRAPATTGAKGHYTEGAELVDSV 414
VPRA + P + T+R QL A A A+GHYT G E++D V
Sbjct: 866 VPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDA-ANNYARGHYTVGKEMIDLV 922
Score = 60.9 bits (141), Expect = 6e-10
Identities = 42/118 (35%), Positives = 53/118 (44%), Gaps = 3/118 (2%)
Frame = +1
Query: 70 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 243
RE + I GQ G QIG WE+ EHGI P G D + + N ++ E GK+
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 244 VPRASSSTWSPAPW-TMSLWTFRTDLPSGQLRXPTVRAPATTGAKGHYTEGAELVDSV 414
VPRA P + T+R QL A A A+GHYT G E +D V
Sbjct: 433 VPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDA-ANNYARGHYTVGKEQIDIV 489
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 61.3 bits (142), Expect = 4e-10
Identities = 41/118 (34%), Positives = 56/118 (47%), Gaps = 3/118 (2%)
Frame = +1
Query: 70 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 243
RE V I GQ G Q+G WE+ EHGI P G D + + N +++E GK+
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 479
Query: 244 VPRASSSTWSPAPW-TMSLWTFRTDLPSGQLRXPTVRAPATTGAKGHYTEGAELVDSV 414
VPRA P+ + T+R QL A A A+GHYT G + +D+V
Sbjct: 480 VPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDA-ANNYARGHYTVGKDHIDNV 536
Score = 47.2 bits (107), Expect = 8e-06
Identities = 33/104 (31%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Frame = +1
Query: 112 IGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKYVPRASSSTWSPAPW 285
+G WE+ EHGI P G D + + N +++E GK+VPRA P
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEPTVV 60
Query: 286 -TMSLWTFRTDLPSGQLRXPTVRAPATTGAKGHYTEGAELVDSV 414
+ T+R QL A A A+GHYT G +L++ V
Sbjct: 61 DEVRTGTYRQLFHPEQLITGKEDA-ANNYARGHYTVGKQLIEIV 103
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 58.8 bits (136), Expect = 2e-09
Identities = 41/118 (34%), Positives = 53/118 (44%), Gaps = 2/118 (1%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 240
MRE + I GQ G QIG WE+ EHGI P G D + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 241 YVPRASSSTWSPAPWTMSLWTFRTDLPSGQLRXPTVRAPATTGAKGHYTEGAELVDSV 414
+VPRA P +S L +G+ A A+GHYT G + VD V
Sbjct: 61 HVPRAVFVDLEPTVVALS----PEQLITGK------EDAANNYARGHYTIGKQQVDQV 108
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 58.0 bits (134), Expect = 4e-09
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQ--LERINVYYNEASGGK 240
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GGK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 241 YVPRA 255
+VPRA
Sbjct: 61 HVPRA 65
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 47.2 bits (107), Expect = 8e-06
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +2
Query: 293 RSGPFGQIYRPDNFVXRQYGRRQQL--GPRDTTRRVLNSSIQXNTSFRKEAESCDCLQGF 466
R GP G ++RPDNFV Q G G ++++ RKEAE+CDC+QG
Sbjct: 33 RGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELIDNIFDV---LRKEAENCDCMQGV 89
Query: 467 QL 472
QL
Sbjct: 90 QL 91
Score = 35.9 bits (79), Expect = 0.019
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Frame = +1
Query: 229 SGGKYVPRASSSTWSPAPWTMSLWTFRTDLPSGQLRXP-----TVRAPATTGAKGHYTEG 393
+GG+YVPR+ P TM R P G + P + A AKGHY+EG
Sbjct: 11 TGGRYVPRSILVDLEPG--TMD--AVRGG-PLGNMFRPDNFVNSQSGAANNWAKGHYSEG 65
Query: 394 AELVDSV*HVVSK 432
AEL+D++ V+ K
Sbjct: 66 AELIDNIFDVLRK 78
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 46.4 bits (105), Expect = 1e-05
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLER----INVYYNEASG 234
MRE + I GQ G QIG WE+ EHGI P G H SD +R + +++E +
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDG--HMPSDQSADRCDDSFSTFFSETAS 253
Query: 235 GKYVPRAS 258
GK+ + +
Sbjct: 254 GKHADQCT 261
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 44.8 bits (101), Expect = 4e-05
Identities = 18/35 (51%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +1
Query: 124 FWEIISDEHGIDPTGAYHG-DSDLQLERINVYYNE 225
FWE+I++EHGIDP G S +Q +R+NVY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 35.5 bits (78), Expect = 0.025
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +2
Query: 428 RKEAESCDCLQGFQLTHS 481
RKEAE CD +QGFQL HS
Sbjct: 2 RKEAEDCDAIQGFQLLHS 19
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 32.3 bits (70), Expect = 0.23
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +1
Query: 76 IVHIQAGQCGNQIGAKFWEIISDE 147
IV +Q GQCGNQIG + +++I ++
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVED 26
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 31.9 bits (69), Expect = 0.31
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +1
Query: 199 ERINVYYNEASGGKYVPRASSSTWSPAPW-TMSLWTFRTDLPSGQLRXPTVRAPATTGAK 375
+ N ++ E GK+VPRA P + T+R QL A A A+
Sbjct: 12 DSFNTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDA-ANNYAR 70
Query: 376 GHYTEGAELVD 408
GHYT G E +D
Sbjct: 71 GHYTVGKEHID 81
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 31.5 bits (68), Expect = 0.40
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +2
Query: 428 RKEAESCDCLQGFQLTHS 481
RK AE+CD +QGFQ+ HS
Sbjct: 29 RKLAENCDTVQGFQIAHS 46
Score = 29.5 bits (63), Expect = 1.6
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +1
Query: 358 ATTGAKGHYTEGAELVDS 411
A AKG YTEGAEL+DS
Sbjct: 6 ANNWAKGFYTEGAELMDS 23
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 29.5 bits (63), Expect = 1.6
Identities = 21/65 (32%), Positives = 27/65 (41%)
Frame = +1
Query: 220 NEASGGKYVPRASSSTWSPAPWTMSLWTFRTDLPSGQLRXPTVRAPATTGAKGHYTEGAE 399
+EA+ GKYVPRA P L + A A+GHYT G E
Sbjct: 965 SEAAAGKYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKE 1024
Query: 400 LVDSV 414
+V+ V
Sbjct: 1025 MVEVV 1029
>SB_31090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 502
Score = 28.3 bits (60), Expect = 3.8
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = -2
Query: 362 VAGARTVGIRSCPDGRSVRKVQSDIVHG 279
V+G R++ ++ PD ++V+K SDI+ G
Sbjct: 171 VSGIRSLDLKDAPDFKTVQKEVSDILQG 198
>SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 27.5 bits (58), Expect = 6.6
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -1
Query: 222 IVVYIDALQLQVRVPM-VGTGGVDAVLVGDDLPEL 121
I VY DA++LQV P+ G+D + V D EL
Sbjct: 48 ITVYADAVELQVTYPLRAPLRGIDLITVYADAVEL 82
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,962,584
Number of Sequences: 59808
Number of extensions: 348697
Number of successful extensions: 968
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 921
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1087245449
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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