Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0142
(501 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 161 3e-40
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 150 5e-37
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 148 2e-36
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 148 2e-36
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 142 1e-34
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 141 2e-34
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 105 2e-23
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 105 2e-23
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 74 7e-14
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 70 8e-13
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 70 8e-13
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 70 1e-12
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 68 3e-12
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 68 3e-12
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 67 8e-12
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 66 2e-11
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 66 2e-11
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 66 2e-11
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 64 7e-11
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 62 2e-10
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 62 2e-10
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 57 8e-09
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 54 4e-08
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 51 5e-07
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 51 5e-07
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 47 7e-06
Z34800-4|CAA84323.2| 441|Caenorhabditis elegans Hypothetical pr... 30 0.82
Z68342-9|CAD91630.2| 626|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z67734-3|CAA91529.2| 1050|Caenorhabditis elegans Hypothetical pr... 27 7.6
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 161 bits (390), Expect = 3e-40
Identities = 88/127 (69%), Positives = 93/127 (73%), Gaps = 5/127 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREIVHIQAGQCGNQIGAKFWE+ISDEHGIDPTGAY+GDSDLQLERINVYYNEASGGKYV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYV 60
Query: 247 PRASSSTWSPAPWTMSLWTFRTDLPSGQLRXPTVRAPATTG-----AKGHYTEGAELVDS 411
PRA P TM + R P GQL P +G AKGHYTEGAELVD+
Sbjct: 61 PRACLVDLEPG--TMD--SVRAG-PFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDN 115
Query: 412 V*HVVSK 432
V VV K
Sbjct: 116 VLDVVRK 122
Score = 63.3 bits (147), Expect = 1e-10
Identities = 33/65 (50%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Frame = +2
Query: 293 RSGPFGQIYRPDNFVXRQYGRRQQLGPRDTTRRVLNSSIQXNTS--FRKEAESCDCLQGF 466
R+GPFGQ++RPDNFV Q G T + + N RKEAESCDCLQGF
Sbjct: 77 RAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTE---GAELVDNVLDVVRKEAESCDCLQGF 133
Query: 467 QLTHS 481
Q+THS
Sbjct: 134 QMTHS 138
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 150 bits (364), Expect = 5e-37
Identities = 82/127 (64%), Positives = 90/127 (70%), Gaps = 5/127 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREIVH+QAGQCGNQIGAKFWE+ISDEHGI P G Y G+SDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYV 60
Query: 247 PRASSSTWSPAPWTMSLWTFRTDLPSGQLRXPTVRAPATTG-----AKGHYTEGAELVDS 411
PRA P TM + R+ P GQL P +G AKGHYTEGAELVD+
Sbjct: 61 PRAVLVDLEPG--TMD--SVRSG-PFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDN 115
Query: 412 V*HVVSK 432
V VV K
Sbjct: 116 VLDVVRK 122
Score = 63.7 bits (148), Expect = 7e-11
Identities = 34/65 (52%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Frame = +2
Query: 293 RSGPFGQIYRPDNFVXRQYGRRQQLGPRDTTRRVLNSSIQXNTS--FRKEAESCDCLQGF 466
RSGPFGQ++RPDNFV Q G T + + N RKEAE CDCLQGF
Sbjct: 77 RSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTE---GAELVDNVLDVVRKEAEGCDCLQGF 133
Query: 467 QLTHS 481
QLTHS
Sbjct: 134 QLTHS 138
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 148 bits (359), Expect = 2e-36
Identities = 82/127 (64%), Positives = 89/127 (70%), Gaps = 5/127 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREIVHIQAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 247 PRASSSTWSPAPWTMSLWTFRTDLPSGQLRXPTVRAPATTG-----AKGHYTEGAELVDS 411
PRA P TM + R+ P GQL P +G AKGHYTEGAELVD+
Sbjct: 61 PRAVLVDLEPG--TMD--SVRSG-PFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDN 115
Query: 412 V*HVVSK 432
V VV K
Sbjct: 116 VLDVVRK 122
Score = 60.1 bits (139), Expect = 9e-10
Identities = 33/65 (50%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Frame = +2
Query: 293 RSGPFGQIYRPDNFVXRQYGRRQQLGPRDTTRRVLNSSIQXNTS--FRKEAESCDCLQGF 466
RSGPFGQ++RPDN+V Q G T + + N RKEAES DCLQGF
Sbjct: 77 RSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTE---GAELVDNVLDVVRKEAESTDCLQGF 133
Query: 467 QLTHS 481
QLTHS
Sbjct: 134 QLTHS 138
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 148 bits (359), Expect = 2e-36
Identities = 82/127 (64%), Positives = 89/127 (70%), Gaps = 5/127 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREIVHIQAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 247 PRASSSTWSPAPWTMSLWTFRTDLPSGQLRXPTVRAPATTG-----AKGHYTEGAELVDS 411
PRA P TM + R+ P GQL P +G AKGHYTEGAELVD+
Sbjct: 61 PRAVLVDLEPG--TMD--SVRSG-PFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDN 115
Query: 412 V*HVVSK 432
V VV K
Sbjct: 116 VLDVVRK 122
Score = 60.1 bits (139), Expect = 9e-10
Identities = 33/65 (50%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Frame = +2
Query: 293 RSGPFGQIYRPDNFVXRQYGRRQQLGPRDTTRRVLNSSIQXNTS--FRKEAESCDCLQGF 466
RSGPFGQ++RPDN+V Q G T + + N RKEAES DCLQGF
Sbjct: 77 RSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTE---GAELVDNVLDVVRKEAESTDCLQGF 133
Query: 467 QLTHS 481
QLTHS
Sbjct: 134 QLTHS 138
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 142 bits (345), Expect = 1e-34
Identities = 77/127 (60%), Positives = 89/127 (70%), Gaps = 5/127 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G+SDLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYV 60
Query: 247 PRASSSTWSPAPWTMSLWTFRTDLPSGQLRXPTVRAPATTG-----AKGHYTEGAELVDS 411
PRA P TM + R+ P GQL P +G AKGHYTEGAELVD+
Sbjct: 61 PRAVLVDLEPG--TMD--SVRSG-PFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDN 115
Query: 412 V*HVVSK 432
V V+ K
Sbjct: 116 VLDVIRK 122
Score = 64.1 bits (149), Expect = 5e-11
Identities = 34/65 (52%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Frame = +2
Query: 293 RSGPFGQIYRPDNFVXRQYGRRQQLGPRDTTRRVLNSSIQXNTS--FRKEAESCDCLQGF 466
RSGPFGQ++RPDNFV Q G T + + N RKEAE CDCLQGF
Sbjct: 77 RSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTE---GAELVDNVLDVIRKEAEGCDCLQGF 133
Query: 467 QLTHS 481
QLTHS
Sbjct: 134 QLTHS 138
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 141 bits (342), Expect = 2e-34
Identities = 76/127 (59%), Positives = 89/127 (70%), Gaps = 5/127 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G++DLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYV 60
Query: 247 PRASSSTWSPAPWTMSLWTFRTDLPSGQLRXPTVRAPATTG-----AKGHYTEGAELVDS 411
PRA P TM + R+ P GQL P +G AKGHYTEGAELVD+
Sbjct: 61 PRAVLVDLEPG--TMD--SVRSG-PFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDN 115
Query: 412 V*HVVSK 432
V V+ K
Sbjct: 116 VLDVIRK 122
Score = 64.1 bits (149), Expect = 5e-11
Identities = 34/65 (52%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Frame = +2
Query: 293 RSGPFGQIYRPDNFVXRQYGRRQQLGPRDTTRRVLNSSIQXNTS--FRKEAESCDCLQGF 466
RSGPFGQ++RPDNFV Q G T + + N RKEAE CDCLQGF
Sbjct: 77 RSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTE---GAELVDNVLDVIRKEAEGCDCLQGF 133
Query: 467 QLTHS 481
QLTHS
Sbjct: 134 QLTHS 138
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 105 bits (252), Expect = 2e-23
Identities = 53/122 (43%), Positives = 68/122 (55%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 247 PRASSSTWSPAPWTMSLWTFRTDLPSGQLRXPTVRAPATTGAKGHYTEGAELVDSV*HVV 426
PRA P T L + ++G+Y +GAE+VD V V+
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVI 120
Query: 427 SK 432
+
Sbjct: 121 RR 122
Score = 34.3 bits (75), Expect = 0.050
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +2
Query: 293 RSGPFGQIYRPDNFVXRQYG--RRQQLGPRDTTRRVLNSSIQXNTSFRKEAESCDCLQGF 466
RS +G+++ P+N V + G G + +++ + R+EAE+ D L+GF
Sbjct: 77 RSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSV---IRREAEAADSLEGF 133
Query: 467 QLTHS 481
QL HS
Sbjct: 134 QLIHS 138
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 105 bits (252), Expect = 2e-23
Identities = 53/122 (43%), Positives = 68/122 (55%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 247 PRASSSTWSPAPWTMSLWTFRTDLPSGQLRXPTVRAPATTGAKGHYTEGAELVDSV*HVV 426
PRA P T L + ++G+Y +GAE+VD V V+
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVI 120
Query: 427 SK 432
+
Sbjct: 121 RR 122
Score = 34.3 bits (75), Expect = 0.050
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +2
Query: 293 RSGPFGQIYRPDNFVXRQYG--RRQQLGPRDTTRRVLNSSIQXNTSFRKEAESCDCLQGF 466
RS +G+++ P+N V + G G + +++ + R+EAE+ D L+GF
Sbjct: 77 RSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSV---IRREAEAADSLEGF 133
Query: 467 QLTHS 481
QL HS
Sbjct: 134 QLIHS 138
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 73.7 bits (173), Expect = 7e-14
Identities = 43/121 (35%), Positives = 62/121 (51%), Gaps = 3/121 (2%)
Frame = +1
Query: 61 NKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASG 234
N+ RE++ I GQ G Q+G WE+ EHGI P G + + L + + N +++E
Sbjct: 4 NRSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMA 63
Query: 235 GKYVPRASSSTWSPAPW-TMSLWTFRTDLPSGQLRXPTVRAPATTGAKGHYTEGAELVDS 411
GK+VPRA P P + T++T QL A A A+GHYT G E++D
Sbjct: 64 GKHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDA-ANNYARGHYTIGKEIIDV 122
Query: 412 V 414
V
Sbjct: 123 V 123
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 70.1 bits (164), Expect = 8e-13
Identities = 40/117 (34%), Positives = 56/117 (47%), Gaps = 1/117 (0%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MRE++ I GQ G QIG WE+ EHGI P G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 247 PRASSSTWSPAPW-TMSLWTFRTDLPSGQLRXPTVRAPATTGAKGHYTEGAELVDSV 414
PR+ P + T++ Q+ A A A+GHYT G EL+D+V
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDA-ANNYARGHYTVGKELIDTV 116
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 70.1 bits (164), Expect = 8e-13
Identities = 40/117 (34%), Positives = 56/117 (47%), Gaps = 1/117 (0%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MRE++ I GQ G QIG WE+ EHGI P G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 247 PRASSSTWSPAPW-TMSLWTFRTDLPSGQLRXPTVRAPATTGAKGHYTEGAELVDSV 414
PR+ P + T++ Q+ A A A+GHYT G EL+D+V
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDA-ANNYARGHYTVGKELIDTV 116
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 69.7 bits (163), Expect = 1e-12
Identities = 45/119 (37%), Positives = 60/119 (50%), Gaps = 4/119 (3%)
Frame = +1
Query: 70 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL---QLERINVYYNEASGGK 240
RE++ I GQ G QIG WE+ EHGI P G YH + D + E IN ++ E +GGK
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDG-YHVEDDTYDEETETINTFFAETAGGK 66
Query: 241 YVPRASSSTWSPAPW-TMSLWTFRTDLPSGQLRXPTVRAPATTGAKGHYTEGAELVDSV 414
+VPR P + T+R+ QL A A A+G YT G E++D V
Sbjct: 67 HVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDA-ANCYARGRYTIGREMIDVV 124
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 68.1 bits (159), Expect = 3e-12
Identities = 40/117 (34%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MRE++ I GQ G QIG WE+ EHGI P G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 247 PRASSSTWSPAPW-TMSLWTFRTDLPSGQLRXPTVRAPATTGAKGHYTEGAELVDSV 414
PR+ P + T++ Q+ A A A+GHYT G EL+D+V
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDA-ANNYARGHYTVGKELIDTV 116
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 68.1 bits (159), Expect = 3e-12
Identities = 40/117 (34%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MRE++ I GQ G QIG WE+ EHGI P G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 247 PRASSSTWSPAPW-TMSLWTFRTDLPSGQLRXPTVRAPATTGAKGHYTEGAELVDSV 414
PR+ P + T++ Q+ A A A+GHYT G EL+D+V
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDA-ANNYARGHYTVGKELIDTV 116
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 66.9 bits (156), Expect = 8e-12
Identities = 46/119 (38%), Positives = 57/119 (47%), Gaps = 3/119 (2%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASGGK 240
MREIV I GQ G QIG WE+ EHGI P G D+ +E N +++E GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 241 YVPRASSSTWSPAPW-TMSLWTFRTDLPSGQLRXPTVRAPATTGAKGHYTEGAELVDSV 414
+VPRA P + T+ QL A A A+GHYT G EL+D V
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDA-ANNYARGHYTIGKELIDVV 118
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 65.7 bits (153), Expect = 2e-11
Identities = 41/117 (35%), Positives = 57/117 (48%), Gaps = 3/117 (2%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 240
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 241 YVPRASSSTWSPAPW-TMSLWTFRTDLPSGQLRXPTVRAPATTGAKGHYTEGAELVD 408
+VPRA P + T+R+ QL A A A+GHYT G E++D
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDA-ANNYARGHYTIGKEIID 116
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 65.7 bits (153), Expect = 2e-11
Identities = 41/117 (35%), Positives = 57/117 (48%), Gaps = 3/117 (2%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 240
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 241 YVPRASSSTWSPAPW-TMSLWTFRTDLPSGQLRXPTVRAPATTGAKGHYTEGAELVD 408
+VPRA P + T+R+ QL A A A+GHYT G E++D
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDA-ANNYARGHYTIGKEIID 116
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 65.7 bits (153), Expect = 2e-11
Identities = 41/117 (35%), Positives = 57/117 (48%), Gaps = 3/117 (2%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 240
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 241 YVPRASSSTWSPAPW-TMSLWTFRTDLPSGQLRXPTVRAPATTGAKGHYTEGAELVD 408
+VPRA P + T+R+ QL A A A+GHYT G E++D
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDA-ANNYARGHYTIGKEIID 116
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 63.7 bits (148), Expect = 7e-11
Identities = 40/116 (34%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Frame = +1
Query: 70 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 243
RE++ I GQ G QIG WE+ EHGI P G D L + + +++E G++
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 244 VPRASSSTWSPAPW-TMSLWTFRTDLPSGQLRXPTVRAPATTGAKGHYTEGAELVD 408
VPRA P + T+R+ QL A A A+GHYT G E++D
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDA-ANNYARGHYTIGKEIID 115
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 62.1 bits (144), Expect = 2e-10
Identities = 35/115 (30%), Positives = 50/115 (43%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MRE++ I GQ G QIG WE+ EHGI P G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 247 PRASSSTWSPAPWTMSLWTFRTDLPSGQLRXPTVRAPATTGAKGHYTEGAELVDS 411
PR+ P L + A A+GHYT G EL+D+
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDT 115
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 62.1 bits (144), Expect = 2e-10
Identities = 35/115 (30%), Positives = 50/115 (43%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MRE++ I GQ G QIG WE+ EHGI P G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 247 PRASSSTWSPAPWTMSLWTFRTDLPSGQLRXPTVRAPATTGAKGHYTEGAELVDS 411
PR+ P L + A A+GHYT G EL+D+
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDT 115
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 56.8 bits (131), Expect = 8e-09
Identities = 37/116 (31%), Positives = 52/116 (44%), Gaps = 1/116 (0%)
Frame = +1
Query: 70 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTG-AYHGDSDLQLERINVYYNEASGGKYV 246
RE V I GQ G QIG WE+ EHG+D G + + + + + +++E+ GK+V
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMNGKHV 65
Query: 247 PRASSSTWSPAPWTMSLWTFRTDLPSGQLRXPTVRAPATTGAKGHYTEGAELVDSV 414
PRA P +L A A+GHYT G EL+D V
Sbjct: 66 PRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVV 121
Score = 29.5 bits (63), Expect = 1.4
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +2
Query: 293 RSGPFGQIYRPDNFVX-RQYGRRQQLGPRDTTRRVLNSSIQXNTSFRKEAESCDCLQGFQ 469
R+G +G ++ PD + ++ T + L + RK+ E+C+ LQGF
Sbjct: 82 RNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDR--IRKQTENCEGLQGFL 139
Query: 470 LTHS 481
+ HS
Sbjct: 140 VFHS 143
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 54.4 bits (125), Expect = 4e-08
Identities = 34/115 (29%), Positives = 51/115 (44%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MRE++ I GQ G QIG WE+ EHGI P G + D + ++++ G++V
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGT-SMEPDGNSGSLGTFFSDTGYGRHV 59
Query: 247 PRASSSTWSPAPWTMSLWTFRTDLPSGQLRXPTVRAPATTGAKGHYTEGAELVDS 411
PR+ P L + A A+GHYT G E++D+
Sbjct: 60 PRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDT 114
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 50.8 bits (116), Expect = 5e-07
Identities = 22/60 (36%), Positives = 36/60 (60%)
Frame = +1
Query: 76 IVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRA 255
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Score = 27.5 bits (58), Expect = 5.8
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDYVALDLSDRSTVRTTSYXDST---GAGNNWGQGTLHG 389
PR +LVDLEP ++ + + + T + S GAGNNW G G
Sbjct: 63 PRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASGYCQG 113
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 50.8 bits (116), Expect = 5e-07
Identities = 22/60 (36%), Positives = 36/60 (60%)
Frame = +1
Query: 76 IVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRA 255
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Score = 27.5 bits (58), Expect = 5.8
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDYVALDLSDRSTVRTTSYXDST---GAGNNWGQGTLHG 389
PR +LVDLEP ++ + + + T + S GAGNNW G G
Sbjct: 63 PRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASGYCQG 113
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 47.2 bits (107), Expect = 7e-06
Identities = 34/94 (36%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Frame = +1
Query: 145 EHGIDPTGAYHGDSDL---QLERINVYYNEASGGKYVPRASSSTWSPAPW-TMSLWTFRT 312
EHGI P G YH + D + E IN ++ E +GGK+VPR P + T+R+
Sbjct: 5 EHGIQPDG-YHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRS 63
Query: 313 DLPSGQLRXPTVRAPATTGAKGHYTEGAELVDSV 414
QL A A A+G YT G E++D V
Sbjct: 64 LFHPEQLLSGKEDA-ANCYARGRYTIGREMIDVV 96
>Z34800-4|CAA84323.2| 441|Caenorhabditis elegans Hypothetical
protein F45H7.4 protein.
Length = 441
Score = 30.3 bits (65), Expect = 0.82
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +3
Query: 189 LAVGAHQCILQ*SLRRQVRAPRILVDLEPGTMDYVALDLSDRSTVRTTSYXDSTG 353
+AV H+C+ L R ++ I++DL G+ + D + +R + Y D G
Sbjct: 142 IAVTVHECVQNRVLHRDLKDENIVIDLVTGSTKLI--DFGAATVLRRSQYSDFQG 194
>Z68342-9|CAD91630.2| 626|Caenorhabditis elegans Hypothetical
protein F38E11.12 protein.
Length = 626
Score = 27.1 bits (57), Expect = 7.6
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 290 CRSGPFGQIYRPDNFVXRQYGRRQQL 367
CR F +IYR NF+ + YG+ Q+
Sbjct: 165 CRLNRFLKIYRIANFIAQSYGKLTQV 190
>Z67734-3|CAA91529.2| 1050|Caenorhabditis elegans Hypothetical
protein B0198.3 protein.
Length = 1050
Score = 27.1 bits (57), Expect = 7.6
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +1
Query: 145 EHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRASSSTWSP-APWTMSLWTFRTDLP 321
EH +H D DL E VY++ AS ++ +S T SP AP ++L+ + ++P
Sbjct: 646 EHSYASILDFHVDPDLSDEVFEVYWDSASSSEH--SITSPTCSPLAP--IALFEYFDNVP 701
Query: 322 SGQLRXPTVRAPATTGAKGHY 384
+ + R P H+
Sbjct: 702 AYPCQNFKFRQPVKPEGNPHW 722
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,514,660
Number of Sequences: 27780
Number of extensions: 241828
Number of successful extensions: 800
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 752
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 956602620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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