Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0140
         (717 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66495-9|CAH19100.1|  670|Caenorhabditis elegans Hypothetical pr...    70   2e-12
Z66495-8|CAA91274.1|  680|Caenorhabditis elegans Hypothetical pr...    70   2e-12
U39655-3|AAA80409.2|  718|Caenorhabditis elegans Fatty acid coa ...    32   0.36 
U23521-8|AAC46810.4|  505|Caenorhabditis elegans Hypothetical pr...    32   0.47 
U64598-5|AAK39217.3|  638|Caenorhabditis elegans Mechanosensory ...    29   3.3  
Z70751-1|CAA94751.1|  544|Caenorhabditis elegans Hypothetical pr...    29   4.4  
AF288812-1|AAG10199.1|  566|Caenorhabditis elegans synembryn pro...    29   4.4  
AF016449-14|AAG23991.1|  517|Caenorhabditis elegans Hypothetical...    29   4.4  
AC084158-34|AAK68564.1|  566|Caenorhabditis elegans Resistance t...    29   4.4  
U41625-5|AAA83327.1|  700|Caenorhabditis elegans Suppressor of a...    28   5.8  
AY091467-1|AAM44123.1|  700|Caenorhabditis elegans SUR-5 protein.      28   5.8  
AC006834-8|AAF40006.1|  865|Caenorhabditis elegans Hypothetical ...    28   5.8  
U97550-1|AAK18983.2| 1065|Caenorhabditis elegans Hypothetical pr...    28   7.7  

>Z66495-9|CAH19100.1|  670|Caenorhabditis elegans Hypothetical
           protein C36A4.9b protein.
          Length = 670

 Score = 69.7 bits (163), Expect = 2e-12
 Identities = 28/66 (42%), Positives = 42/66 (63%)
 Frame = +3

Query: 264 VWWAASDLGWVVGHSYICYGPLLAGMTSVLYEGKPDRTPDPGQYFRIIEQHRVNALFTIP 443
           V+W  +D GW+ GHSY+ YGPL+ G+  + YEG P   P P + + + +++ V  L+T P
Sbjct: 321 VYWCTADCGWITGHSYLLYGPLMNGLKGIWYEGVP-TYPTPSRMWDVTDKYGVTKLYTSP 379

Query: 444 TAFRVL 461
           TA R L
Sbjct: 380 TAARAL 385



 Score = 40.7 bits (91), Expect = 0.001
 Identities = 17/42 (40%), Positives = 26/42 (61%)
 Frame = +1

Query: 118 PCESVEANEPLYILYTSGTTDAPKGVQRPCGHAATLCWSMKK 243
           P E +++ +PL+ILYTSG+T  PKG+Q       T  ++  K
Sbjct: 270 PVEWMDSEDPLFILYTSGSTGKPKGIQHTTAGYMTYAYATTK 311


>Z66495-8|CAA91274.1|  680|Caenorhabditis elegans Hypothetical
           protein C36A4.9a protein.
          Length = 680

 Score = 69.7 bits (163), Expect = 2e-12
 Identities = 28/66 (42%), Positives = 42/66 (63%)
 Frame = +3

Query: 264 VWWAASDLGWVVGHSYICYGPLLAGMTSVLYEGKPDRTPDPGQYFRIIEQHRVNALFTIP 443
           V+W  +D GW+ GHSY+ YGPL+ G+  + YEG P   P P + + + +++ V  L+T P
Sbjct: 331 VYWCTADCGWITGHSYLLYGPLMNGLKGIWYEGVP-TYPTPSRMWDVTDKYGVTKLYTSP 389

Query: 444 TAFRVL 461
           TA R L
Sbjct: 390 TAARAL 395



 Score = 40.7 bits (91), Expect = 0.001
 Identities = 17/42 (40%), Positives = 26/42 (61%)
 Frame = +1

Query: 118 PCESVEANEPLYILYTSGTTDAPKGVQRPCGHAATLCWSMKK 243
           P E +++ +PL+ILYTSG+T  PKG+Q       T  ++  K
Sbjct: 280 PVEWMDSEDPLFILYTSGSTGKPKGIQHTTAGYMTYAYATTK 321


>U39655-3|AAA80409.2|  718|Caenorhabditis elegans Fatty acid coa
           synthetase familyprotein 17 protein.
          Length = 718

 Score = 32.3 bits (70), Expect = 0.36
 Identities = 16/31 (51%), Positives = 21/31 (67%)
 Frame = +1

Query: 103 EADPVPCESVEANEPLYILYTSGTTDAPKGV 195
           E  PVP  S + ++  +I+YTSGTT  PKGV
Sbjct: 271 EPYPVPTRS-KKDDLAFIMYTSGTTGNPKGV 300


>U23521-8|AAC46810.4|  505|Caenorhabditis elegans Hypothetical
           protein F41C3.3 protein.
          Length = 505

 Score = 31.9 bits (69), Expect = 0.47
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = +1

Query: 124 ESVEANEPLYILYTSGTTDAPKG 192
           E VE ++P  + YTSGTT  PKG
Sbjct: 160 EHVEKSDPASVCYTSGTTGLPKG 182


>U64598-5|AAK39217.3|  638|Caenorhabditis elegans Mechanosensory
           abnormality protein18 protein.
          Length = 638

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +1

Query: 118 PCESVEANEPLYILYTSGTTDAPKGVQ 198
           P + V    PL IL+TSGTT   K  +
Sbjct: 231 PIQQVSGQNPLLILFTSGTTGLAKAAE 257


>Z70751-1|CAA94751.1|  544|Caenorhabditis elegans Hypothetical
           protein F11A3.1 protein.
          Length = 544

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
 Frame = +1

Query: 82  ISWDEGLEAD--PVPCESVEANEPLYIL-YTSGTTDAPKGV 195
           +SW+E +      +P   ++ +  L +L Y+SGTT  PKGV
Sbjct: 161 VSWNEVVSTPVTALPQVPIDVHNDLLVLPYSSGTTGPPKGV 201


>AF288812-1|AAG10199.1|  566|Caenorhabditis elegans synembryn
           protein.
          Length = 566

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = +3

Query: 450 FRVLKRADTNAKYARRYCQ 506
           F+VL R  T++KY RRYC+
Sbjct: 365 FQVLARLCTDSKYVRRYCR 383


>AF016449-14|AAG23991.1|  517|Caenorhabditis elegans Hypothetical
           protein C50H11.1 protein.
          Length = 517

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = +1

Query: 124 ESVEANEPLYILYTSGTTDAPKG 192
           E VE +    I +TSGTT APKG
Sbjct: 172 EHVEKSNAATICFTSGTTGAPKG 194


>AC084158-34|AAK68564.1|  566|Caenorhabditis elegans Resistance to
           inhibitors of cholinesteraseprotein 8, isoform a
           protein.
          Length = 566

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = +3

Query: 450 FRVLKRADTNAKYARRYCQ 506
           F+VL R  T++KY RRYC+
Sbjct: 365 FQVLARLCTDSKYVRRYCR 383


>U41625-5|AAA83327.1|  700|Caenorhabditis elegans Suppressor of
           activated let-60ras protein 5 protein.
          Length = 700

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = +1

Query: 130 VEANEPLYILYTSGTTDAPKGVQRPCG 210
           V  ++PL+++++SGTT  PK +    G
Sbjct: 308 VPFSDPLFVMFSSGTTGIPKAMVHTVG 334


>AY091467-1|AAM44123.1|  700|Caenorhabditis elegans SUR-5 protein.
          Length = 700

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = +1

Query: 130 VEANEPLYILYTSGTTDAPKGVQRPCG 210
           V  ++PL+++++SGTT  PK +    G
Sbjct: 308 VPFSDPLFVMFSSGTTGIPKAMVHTVG 334


>AC006834-8|AAF40006.1|  865|Caenorhabditis elegans Hypothetical
           protein ZK973.2 protein.
          Length = 865

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
 Frame = +3

Query: 555 TRAMGLNVSSACQYFNS--LVGKTGIRGPPITCNPCLGFTGVQIPVARP*XPAG 710
           T  + ++ ++ C +     +V KT  +  P+T NPC G   V  P ++   P G
Sbjct: 787 TVGLDIDPTAPCSFMTCQLIVYKTSEKKNPVTNNPCGGQNAVSRPSSKSPRPGG 840


>U97550-1|AAK18983.2| 1065|Caenorhabditis elegans Hypothetical
           protein T20F7.5 protein.
          Length = 1065

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 20/60 (33%), Positives = 27/60 (45%)
 Frame = +3

Query: 360 GKPDRTPDPGQYFRIIEQHRVNALFTIPTAFRVLKRADTNAKYARRYCQNH*RRSSLLES 539
           G P  T  P QY R+I    +NA    P    +  +  +N K++  Y  NH R S  L S
Sbjct: 120 GPPYYTSPPAQYPRMIPVPHLNAYNMPPPVLPLQPQGSSNQKFSNSY-GNH-RSSPALMS 177


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,721,290
Number of Sequences: 27780
Number of extensions: 447260
Number of successful extensions: 1107
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1036
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1104
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)