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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0139
         (760 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_17763| Best HMM Match : IBN_N (HMM E-Value=3.4e-20)                 87   1e-17
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)              36   0.047
SB_16246| Best HMM Match : Penaeidin (HMM E-Value=3)                   32   0.44 
SB_16777| Best HMM Match : Ribosomal_L15e (HMM E-Value=2.4)            30   1.8  
SB_39434| Best HMM Match : JmjC (HMM E-Value=0.12)                     30   2.3  
SB_58567| Best HMM Match : Phage_integrase (HMM E-Value=1)             29   3.1  
SB_32707| Best HMM Match : Peptidase_A17 (HMM E-Value=4.8e-22)         29   4.1  
SB_29906| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.1  
SB_8812| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   5.4  
SB_36803| Best HMM Match : RhoGAP (HMM E-Value=0)                      28   7.2  
SB_13377| Best HMM Match : Extensin_2 (HMM E-Value=0.00046)            28   7.2  
SB_41369| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.5  
SB_35082| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.5  
SB_30296| Best HMM Match : Met_synt_B12 (HMM E-Value=0)                28   9.5  

>SB_17763| Best HMM Match : IBN_N (HMM E-Value=3.4e-20)
          Length = 681

 Score = 87.0 bits (206), Expect = 1e-17
 Identities = 41/66 (62%), Positives = 48/66 (72%)
 Frame = +2

Query: 2   ENLGDPSIHRSVKPEILSVFGDIALSIGSDFGKYFDVVMQMLLQASNAQVDHNDYDMVEY 181
           EN  D ++HRSVKP ILSVFGDIAL+ G  F KY DVV+  L QA+  QV   DYDM++Y
Sbjct: 593 ENCHDETVHRSVKPHILSVFGDIALATGPHFKKYLDVVIATLTQATQVQVVKTDYDMIDY 652

Query: 182 LGELRE 199
           L ELRE
Sbjct: 653 LNELRE 658



 Score = 30.3 bits (65), Expect = 1.8
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = +1

Query: 205 LEAYTGIIQGLKG 243
           LEAYTGIIQGLKG
Sbjct: 661 LEAYTGIIQGLKG 673


>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1272

 Score = 35.5 bits (78), Expect = 0.047
 Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = +1

Query: 433  KPVHRHAARLAPAASPRGRRNQRTLPXXGRT-KKRMRSRQSRTLPSLP 573
            +P H+   R   ++ PR  R QRT P   RT + R RSR SR  PS P
Sbjct: 1048 RPRHQSRERRPSSSPPRRSRPQRTSPSPRRTPEDRRRSRGSRRSPSPP 1095


>SB_16246| Best HMM Match : Penaeidin (HMM E-Value=3)
          Length = 555

 Score = 32.3 bits (70), Expect = 0.44
 Identities = 18/31 (58%), Positives = 19/31 (61%)
 Frame = -2

Query: 579 SAWQRGKGSALTRTHSLFGSPXXGKRSLVAP 487
           SAW  G+G  L RT S FGSP    R LVAP
Sbjct: 469 SAWLLGQGPRLLRTPSRFGSPLV-PRLLVAP 498


>SB_16777| Best HMM Match : Ribosomal_L15e (HMM E-Value=2.4)
          Length = 167

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = -2

Query: 579 SAWQRGKGSALTRTHSLFGSPXXGKRSLVAPPTRGSRR 466
           S W+RG G+  T    + G P     +L+  PTRG RR
Sbjct: 46  SDWRRGPGNGATDCRKVVGKPVV-PAALMNRPTRGERR 82


>SB_39434| Best HMM Match : JmjC (HMM E-Value=0.12)
          Length = 672

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +3

Query: 174 LNIWVNSAKGSGSIHWNHSRP*RCRFSVRPDIAIVEPH 287
           LNIW++     G +H++      C+ S +  + + EPH
Sbjct: 457 LNIWLSDGNTLGKLHFDPFENFLCQISGKKQVILYEPH 494


>SB_58567| Best HMM Match : Phage_integrase (HMM E-Value=1)
          Length = 257

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 13/52 (25%), Positives = 28/52 (53%)
 Frame = +1

Query: 202 VLEAYTGIIQGLKGVGSQYDRTSLSSSRTCRAIVNFMIQVANEEDRTDAQDG 357
           VLEA++GII  +  +G+   R+  +++     + + + Q+      + A+DG
Sbjct: 188 VLEAFSGIIPNITDIGTHSHRSGGATAAVAAGVADRLFQIHGRWKSSCAKDG 239


>SB_32707| Best HMM Match : Peptidase_A17 (HMM E-Value=4.8e-22)
          Length = 2269

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 17/53 (32%), Positives = 23/53 (43%)
 Frame = -2

Query: 585 QNSAWQRGKGSALTRTHSLFGSPXXGKRSLVAPPTRGSRRRQPCSMSVNRLWC 427
           QN    +   SA+T + S F S   GK   ++PP    RRR   +     L C
Sbjct: 115 QNLGMAKVVASAVTESLSKFSSKGDGKLENISPPKWDGRRRSYATWKKEFLHC 167


>SB_29906| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2463

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -2

Query: 498  LVAPPTRGSRRRQPC 454
            ++ P  RGSRRRQPC
Sbjct: 1968 IIGPAVRGSRRRQPC 1982


>SB_8812| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 604

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 12/37 (32%), Positives = 23/37 (62%)
 Frame = -3

Query: 113 RHQNIFQNRYQYSKQCLQIQIIFQASLIGELMDHLNS 3
           RH N+ Q  Y+    C +I ++ + +  G+L+D++NS
Sbjct: 109 RHHNVIQ-LYETFHTCHKIFLVMEYAAKGDLLDYINS 144


>SB_36803| Best HMM Match : RhoGAP (HMM E-Value=0)
          Length = 1277

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +1

Query: 430 PKPVHRHAARLAPAASPRGRRNQRTLPXXGRTKKRMR 540
           P P+   ++  +P  SP+GRR   +LP  G  +   R
Sbjct: 505 PAPIPSLSSGSSPGGSPKGRRRLPSLPTDGERRGSQR 541


>SB_13377| Best HMM Match : Extensin_2 (HMM E-Value=0.00046)
          Length = 797

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
 Frame = +1

Query: 382 TLLNAFGAHVLAPCSTPKPVHRHAARLAPA-ASPRGRRNQRTLPXXGRTKKRMRSRQSRT 558
           T L A+      P +T   VH       PA  SPR R + RT P    T  R+      +
Sbjct: 630 TPLPAYSPRTTLPANTTPRVHHSPRTPLPAYTSPRVRHSPRT-PVPAYTSPRVHQSPRTS 688

Query: 559 LPS 567
           LP+
Sbjct: 689 LPA 691


>SB_41369| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 807

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +3

Query: 432 KAGSPTCCKVGAGGFPAWAAQPKNASXFXANQKENAFAS 548
           +AG   C +   GG PAW    KN+S    + K+ A+ S
Sbjct: 114 RAGPYICAEWDFGGLPAWLL--KNSSITLRSSKDQAYMS 150


>SB_35082| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 193

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 18/38 (47%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
 Frame = -2

Query: 537 HSLFGSPXXGKRSLVAPPTRGSRRR--QPCSMSVNRLW 430
           H L  S    K SL A  T G  RR  +PCS SV  LW
Sbjct: 46  HDLRWSRHCCKVSLKANKTLGLLRRTLKPCSQSVKELW 83


>SB_30296| Best HMM Match : Met_synt_B12 (HMM E-Value=0)
          Length = 739

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
 Frame = +1

Query: 220 GIIQGLKGVGSQYDRTSLSSSRTCRAIVNFMIQVANEEDRTDAQDGGHIGXHGATLLNAF 399
           G++  L G G  +    + S+R  +  V  +I    EE +    +GG +G   ++L N +
Sbjct: 165 GVVGDLFGAGKMFLPQVIKSARVMKKAVGHLIPFMEEERQMRLANGGGVG--DSSLKNKY 222

Query: 400 -GAHVLA 417
            G  VLA
Sbjct: 223 NGTIVLA 229


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,531,781
Number of Sequences: 59808
Number of extensions: 456285
Number of successful extensions: 1121
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1121
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2070332524
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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