Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0139
         (760 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          27   0.48 
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         25   3.3  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         25   3.3  
AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakini...    24   4.4  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    24   4.4  

>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 27.5 bits (58), Expect = 0.48
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +1

Query: 463 APAASPRGRRNQRTLPXXGRTKKRMRSRQSRTLPSLP 573
           A AA+P GRR +R +    R + R R+R++    + P
Sbjct: 484 AAAAAPEGRRRRRAIARARRRRCRPRARRNPPATTRP 520


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 17/57 (29%), Positives = 23/57 (40%), Gaps = 4/57 (7%)
 Frame = +1

Query: 298 IVNFMIQVANEEDRTDAQDGGHIGXHGATLLNAFGAHVLAP----CSTPKPVHRHAA 456
           I+N   QV  E DR   + G   G HG     +   H + P    C T   + +H A
Sbjct: 333 IINRPPQVPGERDRIANEGGTGCGSHGCCGGASATPHNMPPLGSLCKTVSQIGQHVA 389


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 17/57 (29%), Positives = 23/57 (40%), Gaps = 4/57 (7%)
 Frame = +1

Query: 298 IVNFMIQVANEEDRTDAQDGGHIGXHGATLLNAFGAHVLAP----CSTPKPVHRHAA 456
           I+N   QV  E DR   + G   G HG     +   H + P    C T   + +H A
Sbjct: 333 IINRPPQVPGERDRIANEGGTGCGSHGCCGGASATPHNMPPLGSLCKTVSQIGQHVA 389


>AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakinin
           GPCR protein.
          Length = 634

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 11/31 (35%), Positives = 13/31 (41%)
 Frame = -1

Query: 493 CAAHAGKPPAPTLQHVGEPALVSSMGQARAP 401
           C    GKPP P      EP  V +    +AP
Sbjct: 352 CTGDTGKPPKPPGGKRHEPGFVLTSSLKKAP 382


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
 Frame = +3

Query: 435 AGSPTCCKVGAG-GFPAWAAQPKNASXF 515
           AGS  C +V  G GFPAW  Q  N   F
Sbjct: 202 AGSK-CHRVAQGSGFPAWKTQCFNEELF 228


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 750,612
Number of Sequences: 2352
Number of extensions: 15504
Number of successful extensions: 31
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78586767
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)