SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0139
         (760 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L39793-1|AAA82869.1|  876|Homo sapiens nuclear factor p97 protein.    100   5e-21
L38951-1|AAC41763.1|  876|Homo sapiens importin beta subunit pro...   100   5e-21
BT009797-1|AAP88799.1|  876|Homo sapiens karyopherin (importin) ...   100   5e-21
BC036703-1|AAH36703.1|  876|Homo sapiens karyopherin (importin) ...   100   5e-21
BC024045-1|AAH24045.1|  876|Homo sapiens karyopherin (importin) ...   100   5e-21
BC003572-1|AAH03572.1|  876|Homo sapiens karyopherin (importin) ...   100   5e-21
AF490258-1|AAO85466.1|  667|Homo sapiens XTP9 protein.                 32   2.6  
AB046765-1|BAB13371.2|  968|Homo sapiens KIAA1545 protein protein.     32   2.6  
AL034379-10|CAI20553.1|  280|Homo sapiens dynein, axonemal, ligh...    31   3.4  
BC046117-1|AAH46117.1|  258|Homo sapiens DNALI1 protein protein.       31   4.5  
BC039074-1|AAH39074.1|  258|Homo sapiens DNALI1 protein protein.       31   4.5  
AK131260-1|BAD18438.1|  528|Homo sapiens protein ( Homo sapiens ...    31   4.5  
AL133380-5|CAI23047.1|  482|Homo sapiens mixed lineage kinase 4 ...    31   6.0  
AL133380-4|CAI23046.1| 1036|Homo sapiens mixed lineage kinase 4 ...    31   6.0  
AJ311798-1|CAC84640.1| 1036|Homo sapiens mixed lineage kinase 4b...    31   6.0  
AB058707-1|BAB47433.1|  490|Homo sapiens KIAA1804 protein protein.     31   6.0  

>L39793-1|AAA82869.1|  876|Homo sapiens nuclear factor p97 protein.
          Length = 876

 Score =  100 bits (240), Expect = 5e-21
 Identities = 46/66 (69%), Positives = 56/66 (84%)
 Frame = +2

Query: 2   ENLGDPSIHRSVKPEILSVFGDIALSIGSDFGKYFDVVMQMLLQASNAQVDHNDYDMVEY 181
           ENLG+ ++HRSVKP+ILSVFGDIAL+IG +F KY +VV+  L QAS AQVD +DYDMV+Y
Sbjct: 698 ENLGNENVHRSVKPQILSVFGDIALAIGGEFKKYLEVVLNTLQQASQAQVDKSDYDMVDY 757

Query: 182 LGELRE 199
           L ELRE
Sbjct: 758 LNELRE 763



 Score = 42.7 bits (96), Expect = 0.001
 Identities = 28/80 (35%), Positives = 36/80 (45%)
 Frame = +1

Query: 205  LEAYTGIIQGLKGVGSQYDRTSLSSSRTCRAIVNFMIQVANEEDRTDAQDGGHIGXHGAT 384
            LEAYTGI+QGLKG         +        I++F+  +A +ED TD       G  G  
Sbjct: 766  LEAYTGIVQGLKGDQENVHPDVMLVQPRVEFILSFIDHIAGDEDHTDGVVACAAGLIG-D 824

Query: 385  LLNAFGAHVLAPCSTPKPVH 444
            L  AFG  VL        +H
Sbjct: 825  LCTAFGKDVLKLVEARPMIH 844


>L38951-1|AAC41763.1|  876|Homo sapiens importin beta subunit
           protein.
          Length = 876

 Score =  100 bits (240), Expect = 5e-21
 Identities = 46/66 (69%), Positives = 56/66 (84%)
 Frame = +2

Query: 2   ENLGDPSIHRSVKPEILSVFGDIALSIGSDFGKYFDVVMQMLLQASNAQVDHNDYDMVEY 181
           ENLG+ ++HRSVKP+ILSVFGDIAL+IG +F KY +VV+  L QAS AQVD +DYDMV+Y
Sbjct: 698 ENLGNENVHRSVKPQILSVFGDIALAIGGEFKKYLEVVLNTLQQASQAQVDKSDYDMVDY 757

Query: 182 LGELRE 199
           L ELRE
Sbjct: 758 LNELRE 763



 Score = 42.7 bits (96), Expect = 0.001
 Identities = 28/80 (35%), Positives = 36/80 (45%)
 Frame = +1

Query: 205  LEAYTGIIQGLKGVGSQYDRTSLSSSRTCRAIVNFMIQVANEEDRTDAQDGGHIGXHGAT 384
            LEAYTGI+QGLKG         +        I++F+  +A +ED TD       G  G  
Sbjct: 766  LEAYTGIVQGLKGDQENVHPDVMLVQPRVEFILSFIDHIAGDEDHTDGVVACAAGLIG-D 824

Query: 385  LLNAFGAHVLAPCSTPKPVH 444
            L  AFG  VL        +H
Sbjct: 825  LCTAFGKDVLKLVEARPMIH 844


>BT009797-1|AAP88799.1|  876|Homo sapiens karyopherin (importin)
           beta 1 protein.
          Length = 876

 Score =  100 bits (240), Expect = 5e-21
 Identities = 46/66 (69%), Positives = 56/66 (84%)
 Frame = +2

Query: 2   ENLGDPSIHRSVKPEILSVFGDIALSIGSDFGKYFDVVMQMLLQASNAQVDHNDYDMVEY 181
           ENLG+ ++HRSVKP+ILSVFGDIAL+IG +F KY +VV+  L QAS AQVD +DYDMV+Y
Sbjct: 698 ENLGNENVHRSVKPQILSVFGDIALAIGGEFKKYLEVVLNTLQQASQAQVDKSDYDMVDY 757

Query: 182 LGELRE 199
           L ELRE
Sbjct: 758 LNELRE 763



 Score = 42.7 bits (96), Expect = 0.001
 Identities = 28/80 (35%), Positives = 36/80 (45%)
 Frame = +1

Query: 205  LEAYTGIIQGLKGVGSQYDRTSLSSSRTCRAIVNFMIQVANEEDRTDAQDGGHIGXHGAT 384
            LEAYTGI+QGLKG         +        I++F+  +A +ED TD       G  G  
Sbjct: 766  LEAYTGIVQGLKGDQENVHPDVMLVQPRVEFILSFIDHIAGDEDHTDGVVACAAGLIG-D 824

Query: 385  LLNAFGAHVLAPCSTPKPVH 444
            L  AFG  VL        +H
Sbjct: 825  LCTAFGKDVLKLVEARPMIH 844


>BC036703-1|AAH36703.1|  876|Homo sapiens karyopherin (importin)
           beta 1 protein.
          Length = 876

 Score =  100 bits (240), Expect = 5e-21
 Identities = 46/66 (69%), Positives = 56/66 (84%)
 Frame = +2

Query: 2   ENLGDPSIHRSVKPEILSVFGDIALSIGSDFGKYFDVVMQMLLQASNAQVDHNDYDMVEY 181
           ENLG+ ++HRSVKP+ILSVFGDIAL+IG +F KY +VV+  L QAS AQVD +DYDMV+Y
Sbjct: 698 ENLGNENVHRSVKPQILSVFGDIALAIGGEFKKYLEVVLNTLQQASQAQVDKSDYDMVDY 757

Query: 182 LGELRE 199
           L ELRE
Sbjct: 758 LNELRE 763



 Score = 42.7 bits (96), Expect = 0.001
 Identities = 28/80 (35%), Positives = 36/80 (45%)
 Frame = +1

Query: 205  LEAYTGIIQGLKGVGSQYDRTSLSSSRTCRAIVNFMIQVANEEDRTDAQDGGHIGXHGAT 384
            LEAYTGI+QGLKG         +        I++F+  +A +ED TD       G  G  
Sbjct: 766  LEAYTGIVQGLKGDQENVHPDVMLVQPRVEFILSFIDHIAGDEDHTDGVVACAAGLIG-D 824

Query: 385  LLNAFGAHVLAPCSTPKPVH 444
            L  AFG  VL        +H
Sbjct: 825  LCTAFGKDVLKLVEARPMIH 844


>BC024045-1|AAH24045.1|  876|Homo sapiens karyopherin (importin)
           beta 1 protein.
          Length = 876

 Score =  100 bits (240), Expect = 5e-21
 Identities = 46/66 (69%), Positives = 56/66 (84%)
 Frame = +2

Query: 2   ENLGDPSIHRSVKPEILSVFGDIALSIGSDFGKYFDVVMQMLLQASNAQVDHNDYDMVEY 181
           ENLG+ ++HRSVKP+ILSVFGDIAL+IG +F KY +VV+  L QAS AQVD +DYDMV+Y
Sbjct: 698 ENLGNENVHRSVKPQILSVFGDIALAIGGEFKKYLEVVLNTLQQASQAQVDKSDYDMVDY 757

Query: 182 LGELRE 199
           L ELRE
Sbjct: 758 LNELRE 763



 Score = 42.7 bits (96), Expect = 0.001
 Identities = 28/80 (35%), Positives = 36/80 (45%)
 Frame = +1

Query: 205  LEAYTGIIQGLKGVGSQYDRTSLSSSRTCRAIVNFMIQVANEEDRTDAQDGGHIGXHGAT 384
            LEAYTGI+QGLKG         +        I++F+  +A +ED TD       G  G  
Sbjct: 766  LEAYTGIVQGLKGDQENVHPDVMLVQPRVEFILSFIDHIAGDEDHTDGVVACAAGLIG-D 824

Query: 385  LLNAFGAHVLAPCSTPKPVH 444
            L  AFG  VL        +H
Sbjct: 825  LCTAFGKDVLKLVEARPMIH 844


>BC003572-1|AAH03572.1|  876|Homo sapiens karyopherin (importin)
           beta 1 protein.
          Length = 876

 Score =  100 bits (240), Expect = 5e-21
 Identities = 46/66 (69%), Positives = 56/66 (84%)
 Frame = +2

Query: 2   ENLGDPSIHRSVKPEILSVFGDIALSIGSDFGKYFDVVMQMLLQASNAQVDHNDYDMVEY 181
           ENLG+ ++HRSVKP+ILSVFGDIAL+IG +F KY +VV+  L QAS AQVD +DYDMV+Y
Sbjct: 698 ENLGNENVHRSVKPQILSVFGDIALAIGGEFKKYLEVVLNTLQQASQAQVDKSDYDMVDY 757

Query: 182 LGELRE 199
           L ELRE
Sbjct: 758 LNELRE 763



 Score = 42.7 bits (96), Expect = 0.001
 Identities = 28/80 (35%), Positives = 36/80 (45%)
 Frame = +1

Query: 205  LEAYTGIIQGLKGVGSQYDRTSLSSSRTCRAIVNFMIQVANEEDRTDAQDGGHIGXHGAT 384
            LEAYTGI+QGLKG         +        I++F+  +A +ED TD       G  G  
Sbjct: 766  LEAYTGIVQGLKGDQENVHPDVMLVQPRVEFILSFIDHIAGDEDHTDGVVACAAGLIG-D 824

Query: 385  LLNAFGAHVLAPCSTPKPVH 444
            L  AFG  VL        +H
Sbjct: 825  LCTAFGKDVLKLVEARPMIH 844


>AF490258-1|AAO85466.1|  667|Homo sapiens XTP9 protein.
          Length = 667

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = -2

Query: 576 AWQRGKGSALTRTHSLFGSPXXGKRSLVAPPTRGSRRRQPCSMSVNRL 433
           AW+  +G  L R      +P  G  +L+ PP R  R R+P   S  RL
Sbjct: 516 AWEPFRGLELPRRAFPAAAPAPGSAALLEPPERPYRDREPHGYSPERL 563


>AB046765-1|BAB13371.2|  968|Homo sapiens KIAA1545 protein protein.
          Length = 968

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = -2

Query: 576 AWQRGKGSALTRTHSLFGSPXXGKRSLVAPPTRGSRRRQPCSMSVNRL 433
           AW+  +G  L R      +P  G  +L+ PP R  R R+P   S  RL
Sbjct: 817 AWEPFRGLELPRRAFPAAAPAPGSAALLEPPERPYRDREPHGYSPERL 864


>AL034379-10|CAI20553.1|  280|Homo sapiens dynein, axonemal, light
           intermediate chain 1 protein.
          Length = 280

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = -1

Query: 487 AHAGKPPAPTLQHVGEPALVSSMGQARAPRTRLVK-SPHXP 368
           A A  PPA +L     P LVS   + R+P+ RL+K SP  P
Sbjct: 20  ASAMIPPADSLLKYDTPVLVSRNTEKRSPKARLLKVSPQQP 60


>BC046117-1|AAH46117.1|  258|Homo sapiens DNALI1 protein protein.
          Length = 258

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = -1

Query: 472 PPAPTLQHVGEPALVSSMGQARAPRTRLVK-SPHXP 368
           PPA +L     P LVS   + R+P+ RL+K SP  P
Sbjct: 3   PPADSLLKYDTPVLVSRNTEKRSPKARLLKVSPQQP 38


>BC039074-1|AAH39074.1|  258|Homo sapiens DNALI1 protein protein.
          Length = 258

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = -1

Query: 472 PPAPTLQHVGEPALVSSMGQARAPRTRLVK-SPHXP 368
           PPA +L     P LVS   + R+P+ RL+K SP  P
Sbjct: 3   PPADSLLKYDTPVLVSRNTEKRSPKARLLKVSPQQP 38


>AK131260-1|BAD18438.1|  528|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16192 fis, clone BRTHA2017364, weakly  similar
           to ATP-DEPENDENT RNA HELICASE T26G10.1 IN CHROMOSOME
           III. ).
          Length = 528

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 19/56 (33%), Positives = 24/56 (42%)
 Frame = +1

Query: 388 LNAFGAHVLAPCSTPKPVHRHAARLAPAASPRGRRNQRTLPXXGRTKKRMRSRQSR 555
           LN   A  L P STP P HRH   ++ A       N    P  GR K  +  R+ +
Sbjct: 13  LNHSAATTLIPTSTP-PRHRHLLCISSANHTTATDNDSPFPSFGRVKTLLVHRRRK 67


>AL133380-5|CAI23047.1|  482|Homo sapiens mixed lineage kinase 4
           (KIAA1804) protein.
          Length = 482

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 20/63 (31%), Positives = 27/63 (42%)
 Frame = +1

Query: 376 GATLLNAFGAHVLAPCSTPKPVHRHAARLAPAASPRGRRNQRTLPXXGRTKKRMRSRQSR 555
           GAT+++A GA  L  C +P P H H  R     SP+       +P       R RS   +
Sbjct: 349 GATIISATGASALPLCPSPAP-HSHLPR---EVSPKKHSTVHIVPQRRPASLRSRSDLPQ 404

Query: 556 TLP 564
             P
Sbjct: 405 AYP 407


>AL133380-4|CAI23046.1| 1036|Homo sapiens mixed lineage kinase 4
            (KIAA1804) protein.
          Length = 1036

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 20/63 (31%), Positives = 27/63 (42%)
 Frame = +1

Query: 376  GATLLNAFGAHVLAPCSTPKPVHRHAARLAPAASPRGRRNQRTLPXXGRTKKRMRSRQSR 555
            GAT+++A GA  L  C +P P H H  R     SP+       +P       R RS   +
Sbjct: 903  GATIISATGASALPLCPSPAP-HSHLPR---EVSPKKHSTVHIVPQRRPASLRSRSDLPQ 958

Query: 556  TLP 564
              P
Sbjct: 959  AYP 961


>AJ311798-1|CAC84640.1| 1036|Homo sapiens mixed lineage kinase 4beta
            protein.
          Length = 1036

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 20/63 (31%), Positives = 27/63 (42%)
 Frame = +1

Query: 376  GATLLNAFGAHVLAPCSTPKPVHRHAARLAPAASPRGRRNQRTLPXXGRTKKRMRSRQSR 555
            GAT+++A GA  L  C +P P H H  R     SP+       +P       R RS   +
Sbjct: 903  GATIISATGASALPLCPSPAP-HSHLPR---EVSPKKHSTVHIVPQRRPASLRSRSDLPQ 958

Query: 556  TLP 564
              P
Sbjct: 959  AYP 961


>AB058707-1|BAB47433.1|  490|Homo sapiens KIAA1804 protein protein.
          Length = 490

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 20/63 (31%), Positives = 27/63 (42%)
 Frame = +1

Query: 376 GATLLNAFGAHVLAPCSTPKPVHRHAARLAPAASPRGRRNQRTLPXXGRTKKRMRSRQSR 555
           GAT+++A GA  L  C +P P H H  R     SP+       +P       R RS   +
Sbjct: 357 GATIISATGASALPLCPSPAP-HSHLPR---EVSPKKHSTVHIVPQRRPASLRSRSDLPQ 412

Query: 556 TLP 564
             P
Sbjct: 413 AYP 415


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,966,365
Number of Sequences: 237096
Number of extensions: 2172865
Number of successful extensions: 6028
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 5618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6027
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9183116696
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -