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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0139
         (760 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g53480.1 68418.m06646 importin beta-2, putative similar to im...    58   5e-09
At5g59700.1 68418.m07484 protein kinase, putative similar to rec...    35   0.051
At5g64350.1 68418.m08082 FK506-binding protein (FKBP12) / immuno...    30   1.5  
At1g19110.1 68414.m02377 inter-alpha-trypsin inhibitor heavy cha...    30   1.9  
At3g08760.1 68416.m01018 protein kinase family protein contains ...    29   2.5  
At4g04930.1 68417.m00717 fatty acid desaturase family protein si...    29   4.4  
At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase, pu...    28   5.9  
At3g13060.2 68416.m01628 expressed protein contains Pfam profile...    28   7.7  
At3g13060.1 68416.m01627 expressed protein contains Pfam profile...    28   7.7  

>At5g53480.1 68418.m06646 importin beta-2, putative similar to
           importin-beta2 [Oryza sativa (japonica cultivar-group)]
           GI:3983665; contains Pfam profile PF03810: Importin-beta
           N-terminal domain
          Length = 870

 Score = 58.4 bits (135), Expect = 5e-09
 Identities = 32/67 (47%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
 Frame = +2

Query: 2   ENLGDPSIHRSVKPEILSVFGDIALSIGSDFGKYFDVVMQMLLQAS--NAQVDHNDYDMV 175
           ++L    +HRSVKP I S FGDIAL+IG DF KY+   M ML  A+  +A     D +M 
Sbjct: 696 KDLSSNQLHRSVKPPIFSCFGDIALAIGEDFDKYWRYSMPMLQSAAELSAHSAGADDEMT 755

Query: 176 EYLGELR 196
           EY   LR
Sbjct: 756 EYTNSLR 762


>At5g59700.1 68418.m07484 protein kinase, putative similar to
           receptor-like protein kinase [Catharanthus roseus]
           gi|1644291|emb|CAA97692
          Length = 829

 Score = 35.1 bits (77), Expect = 0.051
 Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
 Frame = +2

Query: 2   ENLGDPSIHRSVKPEILSVFGDIALSIGSDFG----KYFDVV--MQMLLQASNAQVDHND 163
           E++ DPS+   ++P+ L  FG+      +D+G       DV+  ++  LQ   A VD + 
Sbjct: 708 EHIIDPSLRGKIRPDSLRKFGETGEKCLADYGVDRPSMGDVLWNLEYALQLQEAVVDGDP 767

Query: 164 YDMVEYLGELRERF 205
            D    +GEL  RF
Sbjct: 768 EDSTNMIGELPLRF 781


>At5g64350.1 68418.m08082 FK506-binding protein (FKBP12) /
           immunophilin identical to immunophilin (GI:2104957)
           [Arabidopsis thaliana]
          Length = 112

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +3

Query: 462 GAGGFPAWAAQPKNASXF 515
           GAGGFPAW  QP +   F
Sbjct: 87  GAGGFPAWGIQPNSVLDF 104


>At1g19110.1 68414.m02377 inter-alpha-trypsin inhibitor heavy
           chain-related similar to SP|Q61704 Inter-alpha-trypsin
           inhibitor heavy chain H3 precursor {Mus musculus};
           contains Pfam profile PF00092: von Willebrand factor
           type A domain
          Length = 754

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
 Frame = -1

Query: 490 AAHAGKPPAPT-LQHVGEPALVSS-MGQARAPRTRLVKSPHXPRYDRHLGRRCGP 332
           A  A +PPAP       +P L ++ M  A  P   +V +P  P Y  H+  RC P
Sbjct: 26  AVAAPRPPAPMDRSSTTQPYLPTAPMVYAVIPDPGIVDNPDLPSYQPHVHGRCDP 80


>At3g08760.1 68416.m01018 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 557

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = -3

Query: 662 GIFTPASNVWFSXLAFLKCLLXRXNSKIQLGKEGRVLL 549
           G+ TP SNVW   +  L+ L  R N      KE R L+
Sbjct: 357 GLLTPKSNVWSYGIVLLEMLTGRKNMDGSYPKEERNLV 394


>At4g04930.1 68417.m00717 fatty acid desaturase family protein
           similar to D. melanogaster Des-1 protein, GenBank
           accession number X94180; contains Pfam profile PF00487
           Fatty acid desaturase domain
          Length = 332

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = +2

Query: 26  HRSVKPEILSVFGDIALSIGSDFGKYFDVVMQMLLQASNAQVDHN 160
           H S + +ILS +  I    G D   +  + + ++LQ S A + HN
Sbjct: 33  HASRRRQILSCYPQIRQLFGPDPWAFLKITLVVILQLSTAAILHN 77


>At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase,
           putative / cyclophilin, putative / rotamase, putative
           (ROC7) similar to cyclophilin [Arabidopsis thaliana]
           gi|2443755|gb|AAB71401
          Length = 204

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +1

Query: 178 IFG*TPRKVLEAYTGIIQGLKGVGSQYDRTSLSSSRTCRAIVNFMIQ 318
           +FG T  K +E +  +  G KG+G          S   R I +FM+Q
Sbjct: 55  LFGKTVPKTVENFRALCTGEKGIGKNGKALHYKGSSFHRIIPSFMLQ 101


>At3g13060.2 68416.m01628 expressed protein contains Pfam profile
           PF04146: YT521-B-like family
          Length = 634

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +1

Query: 397 FGAHVLAPCSTPKPVHRHAARLAPAASPR 483
           F   + +  S P  +HRH++ ++PA SP+
Sbjct: 227 FDGGIWSDWSKPSDMHRHSSSISPALSPQ 255


>At3g13060.1 68416.m01627 expressed protein contains Pfam profile
           PF04146: YT521-B-like family
          Length = 551

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +1

Query: 397 FGAHVLAPCSTPKPVHRHAARLAPAASPR 483
           F   + +  S P  +HRH++ ++PA SP+
Sbjct: 227 FDGGIWSDWSKPSDMHRHSSSISPALSPQ 255


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,757,643
Number of Sequences: 28952
Number of extensions: 318998
Number of successful extensions: 845
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 841
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1692519896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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