Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0138
         (694 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0BLS0 Cluster: Chromosome undetermined scaffold_115, w...    34   2.9  
UniRef50_Q97UF4 Cluster: Arabinose ABC transporter, permease; n=...    33   6.6  
UniRef50_A5AAE8 Cluster: Remark: possible sequencing error; n=1;...    33   8.8  

>UniRef50_A0BLS0 Cluster: Chromosome undetermined scaffold_115,
           whole genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_115,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1489

 Score = 34.3 bits (75), Expect = 2.9
 Identities = 16/49 (32%), Positives = 29/49 (59%)
 Frame = -2

Query: 612 SVPRLCTIYMGVFKLMFLKIFLFAKENI*LFFPFLNKSTRILVYTVVFN 466
           S+  + T Y+G+  L+ + I  F   N  ++FP+LNK   ++V+ + FN
Sbjct: 160 SIDGIMTFYLGIISLL-INIATFT--NAMIYFPYLNKKIFLIVFAINFN 205


>UniRef50_Q97UF4 Cluster: Arabinose ABC transporter, permease; n=1;
           Sulfolobus solfataricus|Rep: Arabinose ABC transporter,
           permease - Sulfolobus solfataricus
          Length = 285

 Score = 33.1 bits (72), Expect = 6.6
 Identities = 11/36 (30%), Positives = 25/36 (69%)
 Frame = +3

Query: 6   NKFLLFIMMLNKTIDGLVIENSKMYLFTLMFFEIPY 113
           N +LLF ++L  +++GL++  + ++LF+   F +P+
Sbjct: 191 NFYLLFRIILPNSMNGLIVSTALLFLFSFRIFTVPF 226


>UniRef50_A5AAE8 Cluster: Remark: possible sequencing error; n=1;
           Aspergillus niger|Rep: Remark: possible sequencing error
           - Aspergillus niger
          Length = 73

 Score = 32.7 bits (71), Expect = 8.8
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +1

Query: 574 KYPHIYSAETWDTPKPQIGQRIRRLWRMWGP 666
           K P + +       K Q+G  IRR WRMW P
Sbjct: 21  KQPTVEACHLVPLAKTQVGMSIRRCWRMWRP 51


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 637,743,774
Number of Sequences: 1657284
Number of extensions: 12586799
Number of successful extensions: 27201
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 26313
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27200
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54545459628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)