Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0138
         (694 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    24   1.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    24   1.4  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   2.4  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   3.1  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   5.5  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    22   5.5  
AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    22   5.5  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   9.6  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   9.6  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = +3

Query: 258 YNQYFNYGTIWNPRICDMIIILLNLNHEVVLLTKNVVLLCIPKKI 392
           +N+++N    W P     I+ LL      V + +N+ +L I  +I
Sbjct: 843 FNEFYNQRRRWMPSTMANILDLLMDYEHTVKINENISMLYIGYQI 887


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = +3

Query: 258 YNQYFNYGTIWNPRICDMIIILLNLNHEVVLLTKNVVLLCIPKKI 392
           +N+++N    W P     I+ LL      V + +N+ +L I  +I
Sbjct: 843 FNEFYNQRRRWMPSTMANILDLLMDYEHTVKINENISMLYIGYQI 887


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +3

Query: 288 WNPRICDMIIILL 326
           WNP+ CD +I L+
Sbjct: 489 WNPKDCDPLITLI 501


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -3

Query: 464 FEVDLILQSSISPVKALLK*SIKIYFFRY 378
           FE+D I   S  P++ L   S +IY   Y
Sbjct: 302 FEIDRINAESRKPIRILFDVSSEIYNVEY 330


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 659 HILQRRRILCPICGF 615
           HI + +R+ CP C F
Sbjct: 224 HIREDKRLTCPKCPF 238


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -3

Query: 674 PSPGPHILQRRRILCPICG 618
           P P  H L   + LC ICG
Sbjct: 72  PYPPNHPLSGSKHLCSICG 90


>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -2

Query: 615 WSVPRLCTIYMGVFKL 568
           ++VP  CT+ +G FK+
Sbjct: 80  YTVPAGCTVVIGTFKV 95


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/36 (25%), Positives = 17/36 (47%)
 Frame = +3

Query: 258 YNQYFNYGTIWNPRICDMIIILLNLNHEVVLLTKNV 365
           +N+++N    W P     I+ LL      V + +N+
Sbjct: 610 FNEFYNQRRRWMPSTMANILDLLMDYEHTVKINENI 645


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 24  IMMLNKTIDGLVIENSKMYLFTLMFF 101
           + +L  ++   V  NS MY FT +FF
Sbjct: 51  LTILTSSVTLHVCFNSYMYAFTHIFF 76


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,491
Number of Sequences: 336
Number of extensions: 3653
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)