Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0138
         (694 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF024503-1|AAG24089.2|  527|Caenorhabditis elegans Hypothetical ...    31   0.78 
Z83216-7|CAB05676.2|  320|Caenorhabditis elegans Hypothetical pr...    28   5.5  
U64860-2|AAB04992.3|  373|Caenorhabditis elegans Hypothetical pr...    28   5.5  
U41015-11|AAM54187.1|  740|Caenorhabditis elegans Homeodomain in...    28   7.3  
U41015-10|AAA82316.1|  821|Caenorhabditis elegans Homeodomain in...    28   7.3  
U41015-9|AAM54186.1|  846|Caenorhabditis elegans Homeodomain int...    28   7.3  
AC006730-11|ABO16462.1|  327|Caenorhabditis elegans Hypothetical...    28   7.3  
AF022972-13|AAC48241.2|  527|Caenorhabditis elegans Udp-glucuron...    27   9.6  

>AF024503-1|AAG24089.2|  527|Caenorhabditis elegans Hypothetical
           protein F31F4.7 protein.
          Length = 527

 Score = 31.1 bits (67), Expect = 0.78
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = +3

Query: 456 YLKN*IPRYKLIFLWIYLKKGKIIKYFLWQIKIFL 560
           YLK+  PRY  +F   YL  GK I+ +L +I +FL
Sbjct: 135 YLKSHRPRYDAVFFESYLHTGKAIQEYL-EIPVFL 168


>Z83216-7|CAB05676.2|  320|Caenorhabditis elegans Hypothetical
           protein C08F11.9 protein.
          Length = 320

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +3

Query: 453 IYLKN*IPRYKLIFLWIYLKKGKIIKYFLWQ-IKIFLKTLV*IPPYI 590
           +YL   I  +KL  L    ++ K  KY LWQ I IFL   V IP +I
Sbjct: 206 LYLPITISIHKLSRLSTNQERNKPQKYILWQTIFIFLSKAVFIPAFI 252


>U64860-2|AAB04992.3|  373|Caenorhabditis elegans Hypothetical
           protein R106.2 protein.
          Length = 373

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = +3

Query: 42  TIDGLVIENSKMYLF--TLMFFEIPYVNFLNNK*LYCFLSQIF 164
           +I+  + E SK  LF  T   F + Y+N   N  LY FLS  F
Sbjct: 280 SIEANLFEKSKYLLFCCTHFAFALQYINSAANPFLYVFLSDSF 322


>U41015-11|AAM54187.1|  740|Caenorhabditis elegans Homeodomain
           interacting proteinkinase protein 1, isoform c protein.
          Length = 740

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 15/50 (30%), Positives = 27/50 (54%)
 Frame = -3

Query: 185 ELIKELPKYLRQKAV*LFII*KIYVRNFEKHQSE*IHFRVFNHKTIDCLI 36
           +++K+ P Y RQ  + + I+ ++   N E+       F  FNHK+  CL+
Sbjct: 70  KILKKHPSYARQGQIEVSILSRLSNENSEEFNFVRA-FECFNHKSHTCLV 118


>U41015-10|AAA82316.1|  821|Caenorhabditis elegans Homeodomain
           interacting proteinkinase protein 1, isoform a protein.
          Length = 821

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 15/50 (30%), Positives = 27/50 (54%)
 Frame = -3

Query: 185 ELIKELPKYLRQKAV*LFII*KIYVRNFEKHQSE*IHFRVFNHKTIDCLI 36
           +++K+ P Y RQ  + + I+ ++   N E+       F  FNHK+  CL+
Sbjct: 151 KILKKHPSYARQGQIEVSILSRLSNENSEEFNFVRA-FECFNHKSHTCLV 199


>U41015-9|AAM54186.1|  846|Caenorhabditis elegans Homeodomain
           interacting proteinkinase protein 1, isoform b protein.
          Length = 846

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 15/50 (30%), Positives = 27/50 (54%)
 Frame = -3

Query: 185 ELIKELPKYLRQKAV*LFII*KIYVRNFEKHQSE*IHFRVFNHKTIDCLI 36
           +++K+ P Y RQ  + + I+ ++   N E+       F  FNHK+  CL+
Sbjct: 176 KILKKHPSYARQGQIEVSILSRLSNENSEEFNFVRA-FECFNHKSHTCLV 224


>AC006730-11|ABO16462.1|  327|Caenorhabditis elegans Hypothetical
           protein Y27F2A.11 protein.
          Length = 327

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = +3

Query: 264 QYFNYGTIWNPRICDMIIILLNLNHEVVLLTKNVVLLCIPKKIN 395
           Q+    TI+ P I    +ILL  N   V++   +VL C+   IN
Sbjct: 262 QFATSSTIFLPPIVCSFVILLGFNGSQVIVETFLVLACLHSLIN 305


>AF022972-13|AAC48241.2|  527|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein41 protein.
          Length = 527

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +3

Query: 456 YLKN*IPRYKLIFLWIYLKKGKIIKYFLWQIKIFL 560
           YLKN  P+Y  +F   +   GK I+ +L +I +FL
Sbjct: 135 YLKNNRPQYDAVFFESFFFMGKAIQEYL-EIPVFL 168


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,002,522
Number of Sequences: 27780
Number of extensions: 305613
Number of successful extensions: 588
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 578
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 588
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)