Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0138
         (694 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    27   0.22 
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    23   3.6  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    22   6.4  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    22   6.4  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       21   8.4  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 26.6 bits (56), Expect = 0.22
 Identities = 11/38 (28%), Positives = 22/38 (57%)
 Frame = +3

Query: 3   LNKFLLFIMMLNKTIDGLVIENSKMYLFTLMFFEIPYV 116
           + KFL ++    KT+  + +E++ M++  L F +  YV
Sbjct: 315 IEKFLNYLKRGGKTLTSISVESNTMFINILKFLKQKYV 352


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -2

Query: 615 WSVPRLCTIYMGVFKL 568
           +++P  CT+ +G FKL
Sbjct: 432 YTIPAGCTVVIGTFKL 447


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -3

Query: 674 PSPGPHILQRRRILCPICG 618
           P P  H L   + LC ICG
Sbjct: 96  PYPPNHPLSGSKHLCSICG 114


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -3

Query: 674 PSPGPHILQRRRILCPICG 618
           P P  H L   + LC ICG
Sbjct: 96  PYPPNHPLSGSKHLCSICG 114


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 483 KLIFLWIYLKKGKIIKYFLW 542
           K + LW   K+GKI+  F W
Sbjct: 142 KPLQLWDVDKRGKIMLSFAW 161


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,404
Number of Sequences: 438
Number of extensions: 4108
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)