Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0138
         (694 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g55740.2 68416.m06193 proline transporter 2 (ProT2) identical...    30   1.3  
At3g55740.1 68416.m06192 proline transporter 2 (ProT2) identical...    30   1.3  
At2g39890.1 68415.m04903 proline transporter 1 (ProT1) identical...    30   1.7  
At2g36590.1 68415.m04487 proline transporter, putative strong si...    30   1.7  
At1g07290.1 68414.m00776 nucleotide-sugar transporter family pro...    28   5.1  

>At3g55740.2 68416.m06193 proline transporter 2 (ProT2) identical to
           proline transporter 2 GI:1769903 from [Arabidopsis
           thaliana]
          Length = 383

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -3

Query: 662 PHILQRRRILCPICGFGVSHVSALYIW 582
           PH +    ++C I   G+ H+SAL IW
Sbjct: 96  PHFIAIAGVVCAIFAIGIPHLSALGIW 122


>At3g55740.1 68416.m06192 proline transporter 2 (ProT2) identical to
           proline transporter 2 GI:1769903 from [Arabidopsis
           thaliana]
          Length = 439

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -3

Query: 662 PHILQRRRILCPICGFGVSHVSALYIW 582
           PH +    ++C I   G+ H+SAL IW
Sbjct: 152 PHFIAIAGVVCAIFAIGIPHLSALGIW 178


>At2g39890.1 68415.m04903 proline transporter 1 (ProT1) identical to
           proline transporter 1 GI:1769901 from [Arabidopsis
           thaliana]
          Length = 442

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -3

Query: 662 PHILQRRRILCPICGFGVSHVSALYIW 582
           PH +    ++C I   G+ H+SAL +W
Sbjct: 155 PHFIAIAGLICAIFAIGIPHLSALGVW 181


>At2g36590.1 68415.m04487 proline transporter, putative strong
           similarity to proline transporter 1 GI:1769901 from
           [Arabidopsis thaliana]; contains Pfam profile PF01490:
           Transmembrane amino acid transporter protein
          Length = 436

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -3

Query: 662 PHILQRRRILCPICGFGVSHVSALYIW 582
           PH +    ++C +   G+ H+SAL IW
Sbjct: 149 PHFIAIAGLICAVFAIGIPHLSALGIW 175


>At1g07290.1 68414.m00776 nucleotide-sugar transporter family
           protein similar to SP|Q941R4 GDP-mannose transporter
           {Arabidopsis thaliana}
          Length = 359

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -2

Query: 675 TVARPPHSPKASDSLPYLRLWSVPRL 598
           T+ RP  SPK+     YL  WS+P L
Sbjct: 322 TLQRPSQSPKSVQHTVYLLEWSLPEL 347


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,754,082
Number of Sequences: 28952
Number of extensions: 270193
Number of successful extensions: 491
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 491
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1477286152
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)