Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0137
         (684 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           23   2.3  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   4.1  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         22   5.4  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   7.1  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   7.1  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   7.1  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   7.1  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   7.1  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   9.4  

>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +2

Query: 518 SLRAEMEKFYNESWGGENFNHS 583
           +L  + + FY E W G++F+ S
Sbjct: 218 ALPKQEDCFYQEGWNGQSFDVS 239


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -3

Query: 352 TLAITMFSQMAFATGTFLSFIV 287
           TLA T +S + F T  FL FI+
Sbjct: 227 TLANTFWSALYFLTIIFLFFII 248


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +1

Query: 40  NKSKTSYVVTEKSLPNADVYESDSSHSENVKEKPAK 147
           N  KT Y +  KSLP     +S   H+++  ++  K
Sbjct: 186 NTGKTQYNLNSKSLPR-QYSQSRGRHNQSRSKRQPK 220


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -3

Query: 637  FGSIAHKLLSRDIFFWISRMIEVLSAPAFI 548
            FG+IAH L S ++    ++  E LS  A +
Sbjct: 1350 FGTIAHILASTELNLCCTKKKEELSPNALL 1379


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -3

Query: 637  FGSIAHKLLSRDIFFWISRMIEVLSAPAFI 548
            FG+IAH L S ++    ++  E LS  A +
Sbjct: 1350 FGTIAHILASTELNLCCTKKKEELSPNALL 1379


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -3

Query: 637  FGSIAHKLLSRDIFFWISRMIEVLSAPAFI 548
            FG+IAH L S ++    ++  E LS  A +
Sbjct: 1350 FGTIAHILASTELNLCCTKKKEELSPNALL 1379


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -3

Query: 637  FGSIAHKLLSRDIFFWISRMIEVLSAPAFI 548
            FG+IAH L S ++    ++  E LS  A +
Sbjct: 1350 FGTIAHILASTELNLCCTKKKEELSPNALL 1379


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -2

Query: 218 MFSVSSKGFSREVLLSEL 165
           +FSVSS  ++ EVL S L
Sbjct: 229 LFSVSSSSYNCEVLFSFL 246


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 7/28 (25%), Positives = 18/28 (64%)
 Frame = -3

Query: 481 LPFKLSKSRSSFRIGGTLVETYMDMSLL 398
           +P K  +++  +RIG   ++ Y+D +++
Sbjct: 774 IPNKYYEAKQVYRIGSNGLQCYIDRNVV 801


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,120
Number of Sequences: 336
Number of extensions: 3414
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)