Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0137
         (684 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1039 - 34011133-34012218                                         29   3.4  

>01_06_1039 - 34011133-34012218
          Length = 361

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 31/129 (24%), Positives = 59/129 (45%), Gaps = 2/129 (1%)
 Frame = -2

Query: 407 VLVGYMHISIVIRDTKARDIGHNYVLTDGICNWHIFIIYSQINDIYLDYGLLISSVRLIS 228
           VLV YM++++ I  +    + + Y+L   + NW   I  + ++  +    L I+ VRL+ 
Sbjct: 25  VLVSYMYVAVWIFLSFTVIVYNKYILDPKMYNWPFPISLTMVHMAFCS-SLAIALVRLLR 83

Query: 227 VTSMFSVSSKGFSREVLLSELSKSVFIFA-GFSFTFSEWLE-SDS*TSALGKLFSVTTYE 54
           V  +   SS   + ++  S +     +++    F+ S ++  S S    L  L  V  Y 
Sbjct: 84  VVEL--PSSPAMTPQLYTSSVLPIGALYSLSLWFSNSAYIYLSVSFIQMLKALMPVAVYS 141

Query: 53  VLLLFDSIN 27
           + +LF   N
Sbjct: 142 IGVLFKKEN 150


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,965,059
Number of Sequences: 37544
Number of extensions: 333297
Number of successful extensions: 690
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 690
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1733104716
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)