BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0134
(708 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1385 - 33157557-33157655,33157752-33158201,33158864-331590... 73 2e-13
05_01_0064 + 454786-455646,456537-456752 68 8e-12
09_06_0306 + 22186853-22187267,22187553-22187818,22187913-221880... 66 3e-11
01_07_0339 + 42848065-42848943,42849308-42849526 65 6e-11
01_06_1730 + 39494738-39495853 65 6e-11
08_02_1557 + 27867977-27869134 64 8e-11
04_04_1536 - 34207425-34207490,34207801-34208268,34208345-342084... 63 2e-10
02_05_0514 + 29686263-29686728,29687078-29687313,29687435-296875... 63 2e-10
12_01_0990 + 10052430-10052895,10053633-10054219 61 7e-10
09_06_0305 - 22164397-22164779,22164870-22165308 60 2e-09
09_04_0611 - 18948169-18948788,18948876-18948981,18949063-18949386 58 5e-09
09_06_0300 - 22126177-22126434,22126892-22127274,22128596-22129064 57 1e-08
01_05_0693 - 24339917-24340524,24340778-24341252 57 1e-08
04_03_0308 + 14182034-14182522,14182632-14182751,14183694-141839... 57 2e-08
02_03_0174 + 15991418-15991888,15992007-15992126,15992763-159928... 56 2e-08
05_06_0015 + 24953918-24954359,24955622-24955857,24955945-249560... 56 4e-08
09_06_0301 - 22135076-22135333,22136298-22136304,22136751-221369... 55 5e-08
04_01_0548 + 7103540-7103972,7104081-7104667 54 1e-07
04_01_0560 - 7183253-7183839,7183935-7184367 54 1e-07
01_03_0212 + 13842142-13842634,13842727-13843319 54 1e-07
01_03_0209 - 13820980-13821572,13821665-13822157 54 1e-07
09_06_0304 - 22154086-22154364,22154679-22155058,22155763-22156183 53 3e-07
09_06_0303 - 22149214-22149474,22150099-22150236,22150856-221511... 53 3e-07
04_01_0537 + 6970887-6971319,6971428-6971540,6971552-6972016 52 3e-07
01_03_0124 + 12734846-12735356,12735449-12736041 52 3e-07
04_04_1538 + 34239913-34241274,34241468-34241578 52 4e-07
09_06_0299 - 22119427-22119477,22119823-22120193,22120503-22120914 51 8e-07
07_01_0064 + 463358-464341 51 8e-07
01_01_0821 + 6399890-6400397,6400474-6401066 51 1e-06
04_01_0562 + 7212504-7212849,7212946-7213544 50 2e-06
03_05_1159 + 30822397-30822862,30823228-30823814 49 3e-06
01_03_0211 - 13830871-13831463,13831549-13831915 49 4e-06
01_03_0210 + 13825272-13825707,13825794-13826386 49 4e-06
01_01_0820 - 6395150-6395769,6395865-6396294 48 6e-06
09_03_0156 - 12844549-12845138,12845237-12845723 48 1e-05
09_04_0284 + 16384553-16384755,16384884-16385199,16385889-163859... 46 2e-05
07_03_0377 + 17442942-17443529,17443616-17444158 44 1e-04
01_03_0123 - 12728636-12729246,12729336-12729738 43 2e-04
06_03_0575 + 22431744-22432212,22432473-22433077 41 8e-04
09_06_0302 - 22144271-22144543,22144946-22145083,22146004-221462... 41 0.001
05_03_0439 + 14028234-14028287,14029394-14029468,14029562-140296... 38 0.010
11_04_0051 + 12863978-12864476,12864575-12864674,12865567-128656... 36 0.032
09_06_0288 - 22051412-22051515,22051572-22052103 34 0.13
01_07_0148 - 41477708-41477914,41478004-41478179,41478334-41478373 31 0.68
01_07_0144 - 41446735-41446941,41447031-41447206,41447361-41447400 31 0.68
10_08_0840 + 20945899-20946085,20946369-20946478,20946857-20947369 29 2.7
01_01_0542 + 3975500-3975546,3976273-3976370,3976694-3976830,397... 29 2.7
10_08_0851 - 21065832-21065948,21066361-21066705,21067181-210674... 29 3.6
03_04_0168 + 17953848-17954585 29 4.8
02_02_0277 + 8489717-8491468,8491571-8491610,8491719-8491841,849... 28 6.3
03_05_0254 + 22425038-22425197,22426042-22429307,22430420-22431112 25 6.6
09_06_0307 - 22190310-22190468,22190516-22190569,22190677-221910... 28 8.4
07_01_1136 + 10668637-10669665,10670259-10670282 28 8.4
03_05_0249 - 22368986-22369627,22374000-22374890 28 8.4
>04_04_1385 -
33157557-33157655,33157752-33158201,33158864-33159004,
33159058-33159329,33160371-33160821
Length = 470
Score = 72.9 bits (171), Expect = 2e-13
Identities = 33/94 (35%), Positives = 52/94 (55%)
Frame = +2
Query: 272 IAKHNQKYEMGLVSYKLGMNKYGDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFI 451
I +HN + G+ S++LG+N++ D+ + E+ T G + + + +++
Sbjct: 71 IDEHNAAADAGVHSFRLGLNRFADLTNEEYRDTYLGLRNKPRRERKV--------SDRYL 122
Query: 452 SPANVKLPEQVDWRKHGAVPTFKDQGKCGSCWSF 553
+ N LPE VDWR GAV KDQG CGSCW+F
Sbjct: 123 AADNEALPESVDWRTKGAVAEIKDQGGCGSCWAF 156
>05_01_0064 + 454786-455646,456537-456752
Length = 358
Score = 67.7 bits (158), Expect = 8e-12
Identities = 30/83 (36%), Positives = 47/83 (56%)
Frame = +2
Query: 305 LVSYKLGMNKYGDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQV 484
+ SY LG+N++ D+ H EF T G + + + R K +N ++P+++
Sbjct: 89 VTSYWLGLNEFADLTHDEFKATYLGLTPPPTRSNSKHYSSEEFRYGKM---SNGEVPKEM 145
Query: 485 DWRKHGAVPTFKDQGKCGSCWSF 553
DWRK AV K+QG+CGSCW+F
Sbjct: 146 DWRKKNAVTEVKNQGQCGSCWAF 168
>09_06_0306 +
22186853-22187267,22187553-22187818,22187913-22188053,
22188521-22188772
Length = 357
Score = 65.7 bits (153), Expect = 3e-11
Identities = 42/120 (35%), Positives = 59/120 (49%)
Frame = +2
Query: 194 AAAPSQLRKRGRRQFPHEDIPEHKHIIAKHNQKYEMGLVSYKLGMNKYGDMLHHEFVKTM 373
+++P L +G R E ++ I N+K M SYKLG+NK+ D+ EF
Sbjct: 37 SSSPRDLADKGSR---FEVFKKNARYIHDFNRKKGM---SYKLGLNKFADLTLEEFTAKY 90
Query: 374 NGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRKHGAVPTFKDQGKCGSCWSF 553
G N +K G+ G+ ++ P DWR+HGAV KDQG CGSCW+F
Sbjct: 91 TGANPGPITG----LKNGT--GSPPLAAVAGDAPPAWDWREHGAVTRVKDQGPCGSCWAF 144
>01_07_0339 + 42848065-42848943,42849308-42849526
Length = 365
Score = 64.9 bits (151), Expect = 6e-11
Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Frame = +2
Query: 281 HNQKYEMGLVSYKLGMNKYGDMLHHEFVKTMNGFNKT-AKHNKNLYMKGGSVRGAKFISP 457
H + + Y LG+N++ D+ H EF G T A+ N N + ++
Sbjct: 82 HIDEENKKITGYWLGLNEFADLTHDEFKAAYLGLTLTPARRNSNDQL-------FRYEEV 134
Query: 458 ANVKLPEQVDWRKHGAVPTFKDQGKCGSCWSF 553
LP++VDWRK GAV K+QG+CGSCW+F
Sbjct: 135 EAASLPKEVDWRKKGAVTEVKNQGQCGSCWAF 166
>01_06_1730 + 39494738-39495853
Length = 371
Score = 64.9 bits (151), Expect = 6e-11
Identities = 40/114 (35%), Positives = 55/114 (48%), Gaps = 1/114 (0%)
Frame = +2
Query: 215 RKRGRRQFPHEDIPEHKHIIAKHNQKYEMGLVSYKLGMNKYGDMLHHEFVKTMNGFNKTA 394
R G + ++ I +HN++ G Y+L +N++GDM EF T G
Sbjct: 57 RHHGEKHRRFGAFKDNVRYIHEHNKRGGRG---YRLRLNRFGDMGREEFRATFAG----- 108
Query: 395 KHNKNLYMKGGSVRGAKFISPANVK-LPEQVDWRKHGAVPTFKDQGKCGSCWSF 553
H +L G + V+ LP VDWR+ GAV KDQGKCGSCW+F
Sbjct: 109 SHANDLRRDGLAAPPLPGFMYEGVRDLPRAVDWRRKGAVTGVKDQGKCGSCWAF 162
>08_02_1557 + 27867977-27869134
Length = 385
Score = 64.5 bits (150), Expect = 8e-11
Identities = 32/80 (40%), Positives = 45/80 (56%)
Frame = +2
Query: 314 YKLGMNKYGDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWR 493
YKL +N++GDM EF + ++ + H +G R + F+ LP VDWR
Sbjct: 88 YKLRLNRFGDMTADEFRRAYAS-SRVSHHRM---FRGRGERRSGFMYAGARDLPAAVDWR 143
Query: 494 KHGAVPTFKDQGKCGSCWSF 553
+ GAV KDQG+CGSCW+F
Sbjct: 144 EKGAVGAVKDQGQCGSCWAF 163
>04_04_1536 -
34207425-34207490,34207801-34208268,34208345-34208485,
34208582-34208820,34209950-34210436
Length = 466
Score = 62.9 bits (146), Expect = 2e-10
Identities = 31/80 (38%), Positives = 47/80 (58%)
Frame = +2
Query: 314 YKLGMNKYGDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWR 493
++LGMN++ D+ + EF T G K A+ ++ G ++ +LPE VDWR
Sbjct: 98 FRLGMNRFADLTNEEFRATFLGA-KVAERSR--------AAGERYRHDGVEELPESVDWR 148
Query: 494 KHGAVPTFKDQGKCGSCWSF 553
+ GAV K+QG+CGSCW+F
Sbjct: 149 EKGAVAPVKNQGQCGSCWAF 168
>02_05_0514 +
29686263-29686728,29687078-29687313,29687435-29687575,
29687685-29687915
Length = 357
Score = 62.9 bits (146), Expect = 2e-10
Identities = 34/82 (41%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +2
Query: 311 SYKLGMNKYGDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPAN-VKLPEQVD 487
SY LG+N + D+ H EF + G L + G+ AN V LP VD
Sbjct: 86 SYWLGLNHFADIAHEEFKASYLGLKP------GLARRDAQPHGSTTFRYANAVNLPWAVD 139
Query: 488 WRKHGAVPTFKDQGKCGSCWSF 553
WRK GAV K+QG+CGSCW+F
Sbjct: 140 WRKKGAVTPVKNQGECGSCWAF 161
>12_01_0990 + 10052430-10052895,10053633-10054219
Length = 350
Score = 61.3 bits (142), Expect = 7e-10
Identities = 30/80 (37%), Positives = 42/80 (52%)
Frame = +2
Query: 314 YKLGMNKYGDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWR 493
Y LG+N++ D+ EF TM + N + + G K+ + + LP VDWR
Sbjct: 86 YWLGVNQFADLTSEEFKATMTNSKGFSTPNNGVRVS----TGFKYENVSADALPASVDWR 141
Query: 494 KHGAVPTFKDQGKCGSCWSF 553
GAV KDQG+CG CW+F
Sbjct: 142 TKGAVTRIKDQGQCGCCWAF 161
>09_06_0305 - 22164397-22164779,22164870-22165308
Length = 273
Score = 60.1 bits (139), Expect = 2e-09
Identities = 35/83 (42%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +2
Query: 308 VSYKLGMNKYGDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANV-KLPEQV 484
+SYKLG+NK+ DM EF G A V A P V P
Sbjct: 78 MSYKLGLNKFSDMTVEEFAAKYTGVQVDAG--------AAVVTSAPDEQPVLVGDAPPVW 129
Query: 485 DWRKHGAVPTFKDQGKCGSCWSF 553
DWR HGAV KDQG CGSCW+F
Sbjct: 130 DWRDHGAVTPVKDQGSCGSCWAF 152
>09_04_0611 - 18948169-18948788,18948876-18948981,18949063-18949386
Length = 349
Score = 58.4 bits (135), Expect = 5e-09
Identities = 33/82 (40%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Frame = +2
Query: 314 YKLGMNKYGDMLHHEFVKTMNGFNK--TAKHNKNLYMKGGSVRGAKFISPANVKLPEQVD 487
YKL NK+ D+ + EF M GF T N ++ G ++ LP+ VD
Sbjct: 72 YKLADNKFADLTNEEFRAKMLGFRPHVTIPQISNTCSADIAMPGES----SDDILPKSVD 127
Query: 488 WRKHGAVPTFKDQGKCGSCWSF 553
WRK GAV K+QG CGSCW+F
Sbjct: 128 WRKKGAVVEVKNQGDCGSCWAF 149
>09_06_0300 - 22126177-22126434,22126892-22127274,22128596-22129064
Length = 369
Score = 57.2 bits (132), Expect = 1e-08
Identities = 37/94 (39%), Positives = 51/94 (54%)
Frame = +2
Query: 272 IAKHNQKYEMGLVSYKLGMNKYGDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFI 451
+++ N+K M +Y+LG+NK+ DM EFV G AK + + SV A+
Sbjct: 80 VSEFNKKEGM---TYELGLNKFADMTLEEFVAKYAG----AKVDAAAAL--ASVPEAEEE 130
Query: 452 SPANVKLPEQVDWRKHGAVPTFKDQGKCGSCWSF 553
+V P DWR+HG V KDQG CGSCW+F
Sbjct: 131 VVGDV--PAAWDWRQHGVVTPVKDQGSCGSCWAF 162
>01_05_0693 - 24339917-24340524,24340778-24341252
Length = 360
Score = 57.2 bits (132), Expect = 1e-08
Identities = 26/81 (32%), Positives = 42/81 (51%)
Frame = +2
Query: 311 SYKLGMNKYGDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDW 490
+Y LG+N++ D+ EF +T G++ + + G + + +P+ VDW
Sbjct: 85 TYTLGLNQFSDLTDDEFAQTHLGYSWAPPPPSHRHGHRAE-NGTAAAAADDTDVPDSVDW 143
Query: 491 RKHGAVPTFKDQGKCGSCWSF 553
R GAV K+Q CGSCW+F
Sbjct: 144 RARGAVTEVKNQRSCGSCWAF 164
>04_03_0308 +
14182034-14182522,14182632-14182751,14183694-14183937,
14184020-14184312
Length = 381
Score = 56.8 bits (131), Expect = 2e-08
Identities = 30/77 (38%), Positives = 40/77 (51%)
Frame = +2
Query: 323 GMNKYGDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRKHG 502
G+ K+ D+ EF G + + + GG A + P + LP+ DWR+HG
Sbjct: 102 GVTKFSDLTPGEFRDRFLGLRRPSLEG----LVGGEPHEAPIL-PTD-GLPDDFDWREHG 155
Query: 503 AVPTFKDQGKCGSCWSF 553
AV KDQG CGSCWSF
Sbjct: 156 AVGPVKDQGSCGSCWSF 172
>02_03_0174 +
15991418-15991888,15992007-15992126,15992763-15992801,
15994032-15994275,15994388-15994674
Length = 386
Score = 56.4 bits (130), Expect = 2e-08
Identities = 31/77 (40%), Positives = 41/77 (53%)
Frame = +2
Query: 323 GMNKYGDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRKHG 502
G+ K+ D+ EF + G + + L GGS A + P + LP+ DWR HG
Sbjct: 94 GVTKFSDLTPAEFRRAYLGLRTSRR--AFLRGLGGSAHEAPVL-PTD-GLPDDFDWRDHG 149
Query: 503 AVPTFKDQGKCGSCWSF 553
AV K+QG CGSCWSF
Sbjct: 150 AVGPVKNQGSCGSCWSF 166
>05_06_0015 +
24953918-24954359,24955622-24955857,24955945-24956085,
24956188-24956619,24956847-24956948
Length = 450
Score = 55.6 bits (128), Expect = 4e-08
Identities = 34/85 (40%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Frame = +2
Query: 311 SYKLGMNKYGDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVR--GAKFIS-PANV-KLPE 478
SY L +N + D+ H EF G L GG R GA ++ V +P+
Sbjct: 78 SYALALNAFADLTHDEFRAARLG---------RLAAAGGPGRDGGAPYLGVDGGVGAVPD 128
Query: 479 QVDWRKHGAVPTFKDQGKCGSCWSF 553
VDWR+ GAV KDQG CG+CWSF
Sbjct: 129 AVDWRQSGAVTKVKDQGSCGACWSF 153
>09_06_0301 -
22135076-22135333,22136298-22136304,22136751-22136947,
22137089-22137471,22137624-22138029
Length = 416
Score = 55.2 bits (127), Expect = 5e-08
Identities = 35/94 (37%), Positives = 50/94 (53%)
Frame = +2
Query: 272 IAKHNQKYEMGLVSYKLGMNKYGDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFI 451
I + NQK + G+ SY LG+NK+ D+ + EF G K + + + + + +
Sbjct: 56 IHEFNQKSK-GM-SYVLGLNKFSDLTYEEFAAKYTG----VKVDASAFATATTSSPDEEL 109
Query: 452 SPANVKLPEQVDWRKHGAVPTFKDQGKCGSCWSF 553
P V P DWR +GAV KDQG+CGSCW F
Sbjct: 110 -PVGVP-PATWDWRLNGAVTDVKDQGQCGSCWVF 141
>04_01_0548 + 7103540-7103972,7104081-7104667
Length = 339
Score = 54.0 bits (124), Expect = 1e-07
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 7/147 (4%)
Frame = +2
Query: 134 GC-CECCSVL*PGQGRVECLQAAAPSQLRKRGRRQFPHEDIPEHKHIIAKHN----QKYE 298
GC C C +VL + + AA + + R + + + + K N + +
Sbjct: 13 GCLCLCSAVLAARELSDDAAMAARHERWMAQYGRVYRDDAEKARRFEVFKANVAFIESFN 72
Query: 299 MGLVSYKLGMNKYGDMLHHEF--VKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKL 472
G ++ LG+N++ D+ + EF +KT GF + G ++ + L
Sbjct: 73 AGNHNFWLGVNQFADLTNDEFRWMKTNKGFIPSTTRVPT---------GFRYENVNIDAL 123
Query: 473 PEQVDWRKHGAVPTFKDQGKCGSCWSF 553
P VDWR GAV KDQG+CG CW+F
Sbjct: 124 PATVDWRTKGAVTPIKDQGQCGCCWAF 150
>04_01_0560 - 7183253-7183839,7183935-7184367
Length = 339
Score = 53.6 bits (123), Expect = 1e-07
Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Frame = +2
Query: 287 QKYEMGLVSYKLGMNKYGDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANV 466
+ + G + LG+N++ D+ ++EF + K NK +VR NV
Sbjct: 69 ESFNAGNHKFWLGVNQFADLTNYEF--------RATKTNKGFIPS--TVRVPTTFRYENV 118
Query: 467 K---LPEQVDWRKHGAVPTFKDQGKCGSCWSF 553
LP VDWR GAV KDQG+CG CW+F
Sbjct: 119 SIDTLPATVDWRTKGAVTPIKDQGQCGCCWAF 150
>01_03_0212 + 13842142-13842634,13842727-13843319
Length = 361
Score = 53.6 bits (123), Expect = 1e-07
Identities = 31/78 (39%), Positives = 41/78 (52%)
Frame = +2
Query: 320 LGMNKYGDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRKH 499
+GMN++GD+ EFV+ GFN + H+ ISP + + P VDWR
Sbjct: 104 VGMNRFGDLTSTEFVQQFTGFNASGFHSPP----------PTPISPHSWQ-PCCVDWRSS 152
Query: 500 GAVPTFKDQGKCGSCWSF 553
GAV K QG C SCW+F
Sbjct: 153 GAVTGVKFQGNCASCWAF 170
>01_03_0209 - 13820980-13821572,13821665-13822157
Length = 361
Score = 53.6 bits (123), Expect = 1e-07
Identities = 31/78 (39%), Positives = 41/78 (52%)
Frame = +2
Query: 320 LGMNKYGDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRKH 499
+GMN++GD+ EFV+ GFN + H+ ISP + + P VDWR
Sbjct: 104 VGMNRFGDLTSTEFVQQFTGFNASGFHSPP----------PTPISPHSWQ-PCCVDWRSS 152
Query: 500 GAVPTFKDQGKCGSCWSF 553
GAV K QG C SCW+F
Sbjct: 153 GAVTGVKFQGNCASCWAF 170
>09_06_0304 - 22154086-22154364,22154679-22155058,22155763-22156183
Length = 359
Score = 52.8 bits (121), Expect = 3e-07
Identities = 30/82 (36%), Positives = 39/82 (47%)
Frame = +2
Query: 308 VSYKLGMNKYGDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVD 487
++YKL +N++ DM EFV G A SV + +P D
Sbjct: 70 MTYKLALNRFADMTLQEFVAKYAGAKVDAAAAAL-----ASVAEVEEEELVVGDVPASWD 124
Query: 488 WRKHGAVPTFKDQGKCGSCWSF 553
WR+HGAV KDQ CGSCW+F
Sbjct: 125 WREHGAVTAVKDQDGCGSCWAF 146
>09_06_0303 -
22149214-22149474,22150099-22150236,22150856-22151100,
22151344-22151809
Length = 369
Score = 52.8 bits (121), Expect = 3e-07
Identities = 31/83 (37%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = +2
Query: 308 VSYKLGMNKYGDMLHHEFV-KTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQV 484
+SY LG+NK+ DM + EF K G + ++ S GA +P
Sbjct: 86 MSYTLGLNKFSDMSYEEFAAKYTGGMPGSIADDR-------SSAGAVSCKLREKNVPLTW 138
Query: 485 DWRKHGAVPTFKDQGKCGSCWSF 553
DWR AV KDQG CGSCW+F
Sbjct: 139 DWRDSRAVTPVKDQGPCGSCWAF 161
>04_01_0537 + 6970887-6971319,6971428-6971540,6971552-6972016
Length = 336
Score = 52.4 bits (120), Expect = 3e-07
Identities = 39/146 (26%), Positives = 62/146 (42%), Gaps = 6/146 (4%)
Frame = +2
Query: 134 GC-CECCSVL*PGQGRVECLQAAAPSQLRKRGRRQFPHEDIPEHKHIIAKHN----QKYE 298
GC C C +VL + + AA + + R + + + + K N + +
Sbjct: 13 GCLCLCSAVLAARELSDDAAMAARHERWMAQYGRMYKDDAEKARRFEVFKANVAFIESFN 72
Query: 299 MGLVSYKLGMNKYGDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVK-LP 475
G + LG+N++ D+ + EF ++ K NK V N+ LP
Sbjct: 73 AGNHKFWLGVNQFADLTNDEF--------RSTKTNKGFIPSTTRVPTGFRNENVNIDALP 124
Query: 476 EQVDWRKHGAVPTFKDQGKCGSCWSF 553
+DWR G V KDQG+CG CW+F
Sbjct: 125 ATMDWRTKGVVTPIKDQGQCGCCWAF 150
>01_03_0124 + 12734846-12735356,12735449-12736041
Length = 367
Score = 52.4 bits (120), Expect = 3e-07
Identities = 33/80 (41%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +2
Query: 320 LGMNKYGDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVK--LPEQVDWR 493
+GMN +GD+ EFV+ GFN T G V SP + LP VDWR
Sbjct: 108 VGMNLFGDLASGEFVRQFTGFNAT-----------GFVAPPPSPSPIPPRSWLPCCVDWR 156
Query: 494 KHGAVPTFKDQGKCGSCWSF 553
GAV K QG C SCW+F
Sbjct: 157 SSGAVTGVKLQGSCASCWAF 176
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +1
Query: 556 ARLGALEGQHFRQSGYLVSLLRSKTFIDCSGAVTGNNGLQPG 681
A + A+EG H ++G LVS L + +DC TG+NG G
Sbjct: 177 AAVAAIEGLHRIKTGELVS-LSEQVMVDCD---TGSNGCGGG 214
>04_04_1538 + 34239913-34241274,34241468-34241578
Length = 490
Score = 52.0 bits (119), Expect = 4e-07
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +2
Query: 314 YKLGMNKYGDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWR 493
++LGMN++ D+ + EF T G + G G + LP+ VDWR
Sbjct: 112 FRLGMNRFADLTNGEFRATYLGTTPAGR---------GRRVGEAYRHDGVEALPDSVDWR 162
Query: 494 KHGAVPT-FKDQGKCGSCWSF 553
GAV K+QG+CGSCW+F
Sbjct: 163 DKGAVVAPVKNQGQCGSCWAF 183
>09_06_0299 - 22119427-22119477,22119823-22120193,22120503-22120914
Length = 277
Score = 51.2 bits (117), Expect = 8e-07
Identities = 31/94 (32%), Positives = 46/94 (48%)
Frame = +2
Query: 272 IAKHNQKYEMGLVSYKLGMNKYGDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFI 451
+++ N+K M +YKLG+NK+ DM EFV G A + A +
Sbjct: 60 VSEFNKKEGM---TYKLGLNKFADMTLEEFVAKYTGTKVDAAAMARAPQAEEELELAGDV 116
Query: 452 SPANVKLPEQVDWRKHGAVPTFKDQGKCGSCWSF 553
+ + DWR+HGAV ++QG C SCW+F
Sbjct: 117 AAS-------WDWRQHGAVTPAREQGTCESCWAF 143
>07_01_0064 + 463358-464341
Length = 327
Score = 51.2 bits (117), Expect = 8e-07
Identities = 25/80 (31%), Positives = 39/80 (48%)
Frame = +2
Query: 314 YKLGMNKYGDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWR 493
Y+L N++ D+ EF G+N +Y + +S + + P +VDWR
Sbjct: 59 YRLATNRFTDLTDAEFAAMYTGYNPA----NTMY---AAANATTRLSSEDDQQPAEVDWR 111
Query: 494 KHGAVPTFKDQGKCGSCWSF 553
+ GAV K+Q CG CW+F
Sbjct: 112 QQGAVTGVKNQRSCGCCWAF 131
>01_01_0821 + 6399890-6400397,6400474-6401066
Length = 366
Score = 50.8 bits (116), Expect = 1e-06
Identities = 31/80 (38%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +2
Query: 320 LGMNKYGDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAK--FISPANVKLPEQVDWR 493
+GMN++GD+ EF + GFN T GG + A P + LP VDWR
Sbjct: 106 VGMNRFGDLTPGEFAEQFTGFNAT----------GGLLHAAPPPCPIPPDSWLPCCVDWR 155
Query: 494 KHGAVPTFKDQGKCGSCWSF 553
GAV K Q C SCW+F
Sbjct: 156 SSGAVTGVKFQRSCASCWAF 175
>04_01_0562 + 7212504-7212849,7212946-7213544
Length = 314
Score = 50.0 bits (114), Expect = 2e-06
Identities = 24/75 (32%), Positives = 36/75 (48%)
Frame = +2
Query: 329 NKYGDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRKHGAV 508
N++ D+ + EF T G ++ + ++ + + LP VDWR GAV
Sbjct: 53 NQFADLTNAEFRATRTGLRPSSSRGNR------APTSFRYANVSTGDLPASVDWRGKGAV 106
Query: 509 PTFKDQGKCGSCWSF 553
KDQG CG CW+F
Sbjct: 107 NPVKDQGDCGCCWAF 121
>03_05_1159 + 30822397-30822862,30823228-30823814
Length = 350
Score = 49.2 bits (112), Expect = 3e-06
Identities = 24/80 (30%), Positives = 38/80 (47%)
Frame = +2
Query: 314 YKLGMNKYGDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWR 493
++L N++ D+ EF G+ + G+ G + + + P+ +DWR
Sbjct: 88 HRLATNRFADLTDDEFRAARTGYQRPPA------AVAGAGGGFLYENFSLAAAPQSMDWR 141
Query: 494 KHGAVPTFKDQGKCGSCWSF 553
GAV KDQG CG CW+F
Sbjct: 142 AMGAVTGVKDQGSCGCCWAF 161
>01_03_0211 - 13830871-13831463,13831549-13831915
Length = 319
Score = 48.8 bits (111), Expect = 4e-06
Identities = 35/104 (33%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Frame = +2
Query: 257 EHKHIIAKHNQKYEMGL---VSYK--LGMNKYGDMLHHEFVKTMNGFNKTAKHNKNLYMK 421
EH+ I + N + G V+Y +G+N++ D+ + EFV T G H K
Sbjct: 38 EHRFGIFRDNVHFIRGYKPQVTYDSAVGINQFADLTNDEFVATYTGAKPP--HPKE---- 91
Query: 422 GGSVRGAKFISPANVKLPEQVDWRKHGAVPTFKDQGKCGSCWSF 553
+ + P + P +DWR GAV KDQG CGSCW+F
Sbjct: 92 -----APRPVDP--IWTPCCIDWRFRGAVTGVKDQGACGSCWAF 128
>01_03_0210 + 13825272-13825707,13825794-13826386
Length = 342
Score = 48.8 bits (111), Expect = 4e-06
Identities = 35/104 (33%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Frame = +2
Query: 257 EHKHIIAKHNQKYEMGL---VSYK--LGMNKYGDMLHHEFVKTMNGFNKTAKHNKNLYMK 421
EH+ I + N + G V+Y +G+N++ D+ + EFV T G H K
Sbjct: 61 EHRFGIFRDNVHFIRGYKPQVTYDSAVGINQFADLTNDEFVATYTGAKPP--HPKE---- 114
Query: 422 GGSVRGAKFISPANVKLPEQVDWRKHGAVPTFKDQGKCGSCWSF 553
+ + P + P +DWR GAV KDQG CGSCW+F
Sbjct: 115 -----APRPVDP--IWTPCCIDWRFRGAVTGVKDQGACGSCWAF 151
>01_01_0820 - 6395150-6395769,6395865-6396294
Length = 349
Score = 48.4 bits (110), Expect = 6e-06
Identities = 29/78 (37%), Positives = 40/78 (51%)
Frame = +2
Query: 320 LGMNKYGDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRKH 499
L +N++ D+ + EFV T G + + RG + P + LP +DWR
Sbjct: 85 LRVNQFADLTNDEFVSTHTGAKPPCPKD--------APRG---VDP--IWLPCCIDWRYK 131
Query: 500 GAVPTFKDQGKCGSCWSF 553
GAV KDQG CGSCW+F
Sbjct: 132 GAVTDVKDQGACGSCWAF 149
>09_03_0156 - 12844549-12845138,12845237-12845723
Length = 358
Score = 47.6 bits (108), Expect = 1e-05
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Frame = +2
Query: 302 GLVSYKLGMNKYGDMLHHEFVKTMNGFNK-TAKHNKNLYMKGGSVRGAKFISPANVKLPE 478
G ++Y+L N++ D+ EF+ T G+ + ++ G A F V +P
Sbjct: 85 GDLTYQLAENEFADLTEEEFLATYTGYYAGDGPVDDSVITTGAGDVDASF--SYRVDVPA 142
Query: 479 QVDWRKHGAVPTFKDQ-GKCGSCWSF 553
VDWR GAV K Q C SCW+F
Sbjct: 143 SVDWRAQGAVVPPKSQTSTCSSCWAF 168
>09_04_0284 +
16384553-16384755,16384884-16385199,16385889-16385971,
16386802-16386849,16387701-16387965,16388058-16388189,
16388313-16388448,16388557-16388594
Length = 406
Score = 46.4 bits (105), Expect = 2e-05
Identities = 29/73 (39%), Positives = 38/73 (52%), Gaps = 11/73 (15%)
Frame = +2
Query: 470 LPE---QVDWRKHGAVPTFKDQGKCGSCWSFQH----DWEL----WKDSTSVSPATWCRF 616
LPE Q DWR+ G V KDQG CGSCW+F+ W L + +T A + +
Sbjct: 170 LPETLLQKDWREDGIVSPVKDQGHCGSCWTFRSVCRLSWRLLTLEYSSTTGSLEAAYTQA 229
Query: 617 FGAKPSSTAREQL 655
G KP S + +QL
Sbjct: 230 TG-KPVSLSEQQL 241
>07_03_0377 + 17442942-17443529,17443616-17444158
Length = 376
Score = 44.0 bits (99), Expect = 1e-04
Identities = 17/28 (60%), Positives = 18/28 (64%)
Frame = +2
Query: 470 LPEQVDWRKHGAVPTFKDQGKCGSCWSF 553
LP DWR GAV K QG CGSCW+F
Sbjct: 138 LPASFDWRDRGAVTDVKMQGACGSCWAF 165
>01_03_0123 - 12728636-12729246,12729336-12729738
Length = 337
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/76 (31%), Positives = 37/76 (48%)
Frame = +2
Query: 326 MNKYGDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRKHGA 505
+N++ D+ + EFV T G + + + + P + +P +DWR GA
Sbjct: 70 INQFADLTNGEFVATYTGVKQPPPAT---HPHPHPEEAPRPVDP--IWMPCCIDWRFKGA 124
Query: 506 VPTFKDQGKCGSCWSF 553
V KDQG CGS W+F
Sbjct: 125 VTGVKDQGACGSSWAF 140
>06_03_0575 + 22431744-22432212,22432473-22433077
Length = 357
Score = 41.1 bits (92), Expect = 8e-04
Identities = 26/84 (30%), Positives = 39/84 (46%)
Frame = +2
Query: 302 GLVSYKLGMNKYGDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQ 481
G S +L NK+ D+ + EF + T + GGS G + + +P
Sbjct: 88 GKKSPRLTTNKFADLTNEEFAEYYGRPFSTP-------VIGGS--GFMYGNVRTSDVPAN 138
Query: 482 VDWRKHGAVPTFKDQGKCGSCWSF 553
++WR GAV K+Q C SCW+F
Sbjct: 139 INWRDRGAVTQVKNQKDCASCWAF 162
>09_06_0302 -
22144271-22144543,22144946-22145083,22146004-22146278,
22146486-22146957
Length = 385
Score = 40.7 bits (91), Expect = 0.001
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 10/92 (10%)
Frame = +2
Query: 308 VSYKLGMNKYGDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVD 487
++Y+LG+N++ DM EF G +T +L + G+V K PA +P +
Sbjct: 87 MTYRLGLNQFSDMTFEEFAGKFTG-GRTGSIAGDL--RDGAVTYCK--PPAVGYVPPSWN 141
Query: 488 WRKHGAVPTFKDQGKC----------GSCWSF 553
W K+G V K+Q C GSCW+F
Sbjct: 142 WTKYGVVTPVKNQLTCVNTIKMSMYEGSCWAF 173
>05_03_0439 +
14028234-14028287,14029394-14029468,14029562-14029642,
14029778-14029934,14030056-14030060,14030152-14030226,
14030332-14030457,14030604-14030822,14031293-14031406,
14031498-14031533,14031630-14031764
Length = 358
Score = 37.5 bits (83), Expect = 0.010
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
Frame = +2
Query: 455 PANVKLPEQVD----WRKHGAVPTFKDQGKCGSCWSF 553
P ++ LP++ D W + + T DQG CGSCW+F
Sbjct: 97 PRSLMLPKEFDARSAWSQCNTIGTILDQGHCGSCWAF 133
>11_04_0051 +
12863978-12864476,12864575-12864674,12865567-12865657,
12866114-12866176,12866364-12866549,12866994-12867024,
12867054-12867502
Length = 472
Score = 35.9 bits (79), Expect = 0.032
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +2
Query: 302 GLVSYKLGMNKYGDMLHHEFVKTMNGFN-KTAKHNKNLYMKGGSVRGAKFISPANVKLPE 478
G ++Y+L N++ D+ EF+ T G+ + ++ G A F V +P
Sbjct: 89 GDLTYQLAENEFADLTEEEFLATYTGYYIGDGPVDDFVFTTGAGDVDASF--SYRVDVPA 146
Query: 479 QVDWRKHGAVPTFKDQ 526
VDWR GAV K Q
Sbjct: 147 SVDWRAQGAVVPPKSQ 162
>09_06_0288 - 22051412-22051515,22051572-22052103
Length = 211
Score = 33.9 bits (74), Expect = 0.13
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +2
Query: 473 PEQVDWRKHGAVPTFKDQGKC 535
P VDWR GAV KDQG+C
Sbjct: 157 PASVDWRASGAVTEVKDQGRC 177
>01_07_0148 - 41477708-41477914,41478004-41478179,41478334-41478373
Length = 140
Score = 31.5 bits (68), Expect = 0.68
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 274 RQTQPEVRNGPRFLQAGHEQVRRHAP-PRVREDYERLQQNCQTQQESV 414
R+ QP +R R L + E + +H R+RED+ RLQ C Q V
Sbjct: 35 RRAQPGIRPPRRPLPSKREVLAQHHELRRLREDFARLQVQCSALQAQV 82
>01_07_0144 - 41446735-41446941,41447031-41447206,41447361-41447400
Length = 140
Score = 31.5 bits (68), Expect = 0.68
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 274 RQTQPEVRNGPRFLQAGHEQVRRHAP-PRVREDYERLQQNCQTQQESV 414
R+ QP +R R L + E + +H R+RED+ RLQ C Q V
Sbjct: 35 RRAQPGIRPPRRPLPSKREVLAQHHELRRLREDFARLQVQCSALQAQV 82
>10_08_0840 + 20945899-20946085,20946369-20946478,20946857-20947369
Length = 269
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +2
Query: 461 NVKLPEQVDWRKHGAVPTFKDQGKCGSCW 547
NV LP G VP FKD CGSC+
Sbjct: 70 NVNLPPYNGMISCGNVPIFKDGRGCGSCY 98
>01_01_0542 +
3975500-3975546,3976273-3976370,3976694-3976830,
3977518-3977871,3977953-3978041,3978502-3978589,
3978659-3978734,3978858-3978907,3979032-3979340,
3979803-3979982,3980086-3980325,3980471-3980582,
3980931-3981040,3981162-3981311,3981777-3981932,
3982289-3982405,3982759-3982839,3983338-3983478
Length = 844
Score = 29.5 bits (63), Expect = 2.7
Identities = 23/90 (25%), Positives = 42/90 (46%)
Frame = +1
Query: 148 LFSSLTWSRKSGVPSSCSTVSTTKARSKTISA*RYT*AQAHHRQTQPEVRNGPRFLQAGH 327
+F + T + S V +S + KAR + S + +AH +Q+ +++ LQ H
Sbjct: 76 IFIARTNEKHSDVAASYIETQSIKAREQQPSQLQQQ--EAHSQQSSQQIQMQQLLLQR-H 132
Query: 328 EQVRRHAPPRVREDYERLQQNCQTQQESVH 417
Q ++ + + +R QQ Q + ES H
Sbjct: 133 AQQQQQQQSQQQPQQQRRQQKQQQRSESSH 162
>10_08_0851 -
21065832-21065948,21066361-21066705,21067181-21067489,
21067574-21067648,21067754-21067917,21067994-21068432
Length = 482
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +3
Query: 495 STAPSRHSRTKGSVAHAGPFSTTGSFGRTALPSVRLPGVASSEQNLHRL 641
S+ H + SV H+GPF + + L R P A+S +L RL
Sbjct: 43 SSFSEEHGGSGSSVDHSGPFEPPSAAAVSRLIGRRSPAAAASALSLSRL 91
>03_04_0168 + 17953848-17954585
Length = 245
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -1
Query: 426 PPFMYRFLLCLAVLLKPF-IVFTNSWWSMSPYL 331
P M L+CLAV + F I T+ WW ++P L
Sbjct: 161 PAVMVLMLVCLAVFGRVFAICCTSIWWYLAPTL 193
>02_02_0277 +
8489717-8491468,8491571-8491610,8491719-8491841,
8491959-8492014
Length = 656
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +2
Query: 233 QFPHEDIPEHKHIIAKHNQKYEMGLVSYKLGMNKYGDMLHHEFVKTMNGFNKTAKH 400
+FP D H KH++K L S+ G + + H F K+M+ ++ KH
Sbjct: 276 KFPPSD--SHGRKKPKHHKKKHRSLASHGAGYDAEQRLYSHAFKKSMSLLSRLMKH 329
>03_05_0254 + 22425038-22425197,22426042-22429307,22430420-22431112
Length = 1372
Score = 25.0 bits (52), Expect(2) = 6.6
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +2
Query: 467 KLPEQVDWRKHGAVPTFKDQGKCGSCWSFQHDWEL 571
K PE ++WR A+ C SF+++ EL
Sbjct: 1106 KHPESLEWRMENAIKRLNTIRNCRKGISFKNEVEL 1140
Score = 21.4 bits (43), Expect(2) = 6.6
Identities = 5/10 (50%), Positives = 8/10 (80%)
Frame = +2
Query: 557 HDWELWKDST 586
H+W LW++ T
Sbjct: 1163 HNWRLWRERT 1172
>09_06_0307 -
22190310-22190468,22190516-22190569,22190677-22191053,
22191234-22191436,22192798-22192925
Length = 306
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 308 VSYKLGMNKYGDMLHHEFVKTMNG 379
+SY LG+NK+ DM EF+ G
Sbjct: 63 MSYWLGLNKFADMTSEEFMAKYTG 86
>07_01_1136 + 10668637-10669665,10670259-10670282
Length = 350
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 164 PGQGRVECLQAAAPSQLRKRGRRQFPHEDI 253
P R+ C A P+ +R RR+FPH D+
Sbjct: 312 PALERITCGGAPLPAPAIERFRRRFPHVDL 341
>03_05_0249 - 22368986-22369627,22374000-22374890
Length = 510
Score = 27.9 bits (59), Expect = 8.4
Identities = 21/60 (35%), Positives = 29/60 (48%)
Frame = +3
Query: 528 GSVAHAGPFSTTGSFGRTALPSVRLPGVASSEQNLHRLLGSSYGEQRAATGGAHWTNGLS 707
G VA A S++G G A+P R +A + N HR L S R AT ++ GL+
Sbjct: 24 GGVAWA--LSSSGGHGAAAIPGPRGVLLAFAGPNPHRALASLAASTRGATRLMAFSVGLT 81
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,905,851
Number of Sequences: 37544
Number of extensions: 450323
Number of successful extensions: 1694
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 1616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1673
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1827423340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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