Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0134
(708 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_4471| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 2e-14
SB_11428| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 2e-12
SB_39998| Best HMM Match : Peptidase_C1 (HMM E-Value=0) 58 5e-09
SB_17376| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 1e-05
SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_39997| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_25385| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_29711| Best HMM Match : Peptidase_C1 (HMM E-Value=6.9e-06) 39 0.003
SB_49777| Best HMM Match : Peptidase_C1 (HMM E-Value=0) 31 0.92
SB_17484| Best HMM Match : Pox_A32 (HMM E-Value=0.025) 30 2.1
SB_35012| Best HMM Match : Phosphodiest (HMM E-Value=0) 29 4.9
SB_24936| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_3663| Best HMM Match : MBT (HMM E-Value=0) 28 6.5
SB_54948| Best HMM Match : PAN (HMM E-Value=0.0035) 28 8.5
SB_33866| Best HMM Match : NOGCT (HMM E-Value=6.8) 28 8.5
SB_19371| Best HMM Match : C_tripleX (HMM E-Value=0.041) 28 8.5
SB_10156| Best HMM Match : DSL (HMM E-Value=3.3e-35) 28 8.5
>SB_4471| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 331
Score = 76.6 bits (180), Expect = 2e-14
Identities = 41/112 (36%), Positives = 65/112 (58%), Gaps = 4/112 (3%)
Frame = +2
Query: 230 RQFPHEDIPEHKHIIAKHNQK----YEMGLVSYKLGMNKYGDMLHHEFVKTMNGFNKTAK 397
+++P+++ ++ I ++N K + G S+KL MN GDM E +T+ G K K
Sbjct: 38 KEYPNKNEETMRNFIWQNNLKKIVTHNEGKHSFKLAMNHLGDMTSLEISQTLLGL-KLKK 96
Query: 398 HNKNLYMKGGSVRGAKFISPANVKLPEQVDWRKHGAVPTFKDQGKCGSCWSF 553
H ++ +GA F+ PANVK+ + +DWR G V K+QG+CGSCW+F
Sbjct: 97 HAES------QPKGATFLPPANVKVVDSIDWRSKGYVTPVKNQGQCGSCWAF 142
Score = 48.0 bits (109), Expect = 7e-06
Identities = 28/48 (58%), Positives = 34/48 (70%)
Frame = +1
Query: 565 GALEGQHFRQSGYLVSLLRSKTFIDCSGAVTGNNGLQPGGLIGXTAFQ 708
GALEGQHFR++G LVS L + +DCSG GNNG + GGL+ AFQ
Sbjct: 146 GALEGQHFRKTGKLVS-LSEQNLVDCSGKY-GNNGCE-GGLM-DNAFQ 189
>SB_11428| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 521
Score = 70.1 bits (164), Expect = 2e-12
Identities = 37/92 (40%), Positives = 50/92 (54%)
Frame = +2
Query: 278 KHNQKYEMGLVSYKLGMNKYGDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISP 457
K QK+ S+ L MN GD+ EF G H N K GS F++P
Sbjct: 276 KKIQKHNAEGHSFTLAMNHLGDLTQDEFRYFYTGMRS---HYSNYTKKQGSA----FLAP 328
Query: 458 ANVKLPEQVDWRKHGAVPTFKDQGKCGSCWSF 553
++V++P+ VDWRK G V K+QG+CGSCW+F
Sbjct: 329 SHVQVPDTVDWRKEGYVTPVKNQGQCGSCWAF 360
Score = 41.5 bits (93), Expect = 6e-04
Identities = 23/42 (54%), Positives = 31/42 (73%)
Frame = +1
Query: 565 GALEGQHFRQSGYLVSLLRSKTFIDCSGAVTGNNGLQPGGLI 690
G+LEGQ+F+++G LVS L + +DCS A GNNG Q GGL+
Sbjct: 364 GSLEGQNFKKTGKLVS-LSEQNLVDCSTAY-GNNGCQ-GGLM 402
>SB_39998| Best HMM Match : Peptidase_C1 (HMM E-Value=0)
Length = 1220
Score = 58.4 bits (135), Expect = 5e-09
Identities = 32/78 (41%), Positives = 42/78 (53%)
Frame = +2
Query: 320 LGMNKYGDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRKH 499
+ MN GD+ EF G A HN K G A ++ P+NVK+P VDW +
Sbjct: 1 MAMNHLGDLTEDEFRYFYLGVR--AHHNST---KRG---WATYMPPSNVKIPSSVDWSQK 52
Query: 500 GAVPTFKDQGKCGSCWSF 553
G V K+QG+CGSCW+F
Sbjct: 53 GYVTGVKNQGQCGSCWAF 70
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/42 (59%), Positives = 32/42 (76%)
Frame = +1
Query: 565 GALEGQHFRQSGYLVSLLRSKTFIDCSGAVTGNNGLQPGGLI 690
G++EGQHFR++G LVS L + IDCSG+ GNNG Q GGL+
Sbjct: 74 GSVEGQHFRKTGSLVS-LSEQNLIDCSGSY-GNNGCQ-GGLM 112
>SB_17376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 589
Score = 47.6 bits (108), Expect = 1e-05
Identities = 30/92 (32%), Positives = 45/92 (48%)
Frame = +2
Query: 257 EHKHIIAKHNQKYEMGLVSYKLGMNKYGDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVR 436
++ I+ KHN + SYKL MN + D+ EF + G+ + S
Sbjct: 206 DNLEIVKKHNAENH----SYKLDMNHFADLTVTEFKQRFMGYRAASN----------STG 251
Query: 437 GAKFISPANVKLPEQVDWRKHGAVPTFKDQGK 532
G+ F+ +NV+LP +VDWR G V K+Q K
Sbjct: 252 GSTFLPLSNVQLPAEVDWRDKGFVTAVKNQEK 283
Score = 42.3 bits (95), Expect = 4e-04
Identities = 23/42 (54%), Positives = 30/42 (71%)
Frame = +1
Query: 565 GALEGQHFRQSGYLVSLLRSKTFIDCSGAVTGNNGLQPGGLI 690
G+LEGQHFR++G LVS L + +DCS GNNG + GGL+
Sbjct: 355 GSLEGQHFRKTGKLVS-LSEQNLVDCSKKY-GNNGCE-GGLM 393
>SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1512
Score = 46.0 bits (104), Expect = 3e-05
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = +2
Query: 464 VKLPEQVDWRKHGAVPTFKDQGKCGSCWSF 553
V LP VDWRK GAV + K QG CGSC++F
Sbjct: 497 VPLPPHVDWRKAGAVNSVKSQGICGSCYAF 526
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +1
Query: 565 GALEGQHFRQSGYLVSLLRSKTFIDCSGAVTGNNGLQPG 681
GALEG HF Q+G + L + +DC+ GN G + G
Sbjct: 530 GALEGAHFIQTGLKLD-LSEQQIVDCTWGF-GNRGCKGG 566
>SB_39997| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 70
Score = 45.2 bits (102), Expect = 5e-05
Identities = 25/69 (36%), Positives = 36/69 (52%)
Frame = +2
Query: 326 MNKYGDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRKHGA 505
MN++ DM EF + A + RGA F++P N++LP +VDWR+ G
Sbjct: 1 MNEFADMCEEEFRNVYLRYRFNASSPQ---------RGATFMAPNNLELPTKVDWRQQGY 51
Query: 506 VPTFKDQGK 532
V K+QGK
Sbjct: 52 VTPVKNQGK 60
>SB_25385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 44.0 bits (99), Expect = 1e-04
Identities = 28/80 (35%), Positives = 39/80 (48%)
Frame = +2
Query: 314 YKLGMNKYGDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWR 493
Y L MN GD E ++ + G T +N L K ++ N +P++++W
Sbjct: 597 YYLAMNHLGDRSDKE-LRVLRGRRYTKGYNGGLPYKPD-------MASIN-DVPDEMNWV 647
Query: 494 KHGAVPTFKDQGKCGSCWSF 553
GAV KDQ CGSCWSF
Sbjct: 648 IRGAVTPVKDQAVCGSCWSF 667
>SB_29711| Best HMM Match : Peptidase_C1 (HMM E-Value=6.9e-06)
Length = 385
Score = 39.1 bits (87), Expect = 0.003
Identities = 34/112 (30%), Positives = 48/112 (42%), Gaps = 8/112 (7%)
Frame = +2
Query: 242 HEDIPEH---KHIIAKHNQKYEMGL----VSYKLGMNKYGDMLHHEFVKTMNGFNKTAKH 400
+ED EH KHI +HN +Y + + YKL +N + D+ EF + +K
Sbjct: 55 YEDDSEHRRRKHIF-RHNVRYIRSMNRRSLPYKLELNHFPDLTDDEFKSYKGALDDESKD 113
Query: 401 NKNLYMKGGSVRGAKFISPANVKLPE-QVDWRKHGAVPTFKDQGKCGSCWSF 553
N + N + E + D GAV K QG CGSCW+F
Sbjct: 114 VMNDH-------DDVIDDDVNDETQEDEEDEPSDGAVNPAKGQGTCGSCWAF 158
>SB_49777| Best HMM Match : Peptidase_C1 (HMM E-Value=0)
Length = 298
Score = 31.1 bits (67), Expect = 0.92
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 488 WRKHGAVPTFKDQGKCGSCWSF 553
W + +DQG CGSCW+F
Sbjct: 95 WPHCPTIKEVRDQGACGSCWAF 116
>SB_17484| Best HMM Match : Pox_A32 (HMM E-Value=0.025)
Length = 1616
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 145 VLFSSLTWSRKSGVPSSCSTVSTTKARSKTISA*RYT 255
VL L+W R + +C TV T R +T+ A YT
Sbjct: 336 VLVEQLSWFRPTSFVETCLTVRTIATRLRTLCAYAYT 372
>SB_35012| Best HMM Match : Phosphodiest (HMM E-Value=0)
Length = 412
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 587 SVSPATWCRFFGAKPSSTAREQLRGTTG 670
SV+ TW FGAKP T+ E+ G +G
Sbjct: 115 SVTNTTWWSEFGAKPIWTSNEEQGGKSG 142
>SB_24936| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 201
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +3
Query: 549 PFSTTGSFGRTALPSVRLPGVASSEQNLHRLLGSSYGEQRAA 674
P+ + + R ++ PG +S + HR+LG + G RA+
Sbjct: 51 PWVSENTIDRILEHIIKYPGTSSDTRTHHRMLGQTIGHPRAS 92
>SB_3663| Best HMM Match : MBT (HMM E-Value=0)
Length = 327
Score = 28.3 bits (60), Expect = 6.5
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +2
Query: 578 DSTSVSPATWCRFFG 622
DS S+SPA WC F G
Sbjct: 123 DSRSISPARWCNFTG 137
>SB_54948| Best HMM Match : PAN (HMM E-Value=0.0035)
Length = 396
Score = 27.9 bits (59), Expect = 8.5
Identities = 18/57 (31%), Positives = 22/57 (38%)
Frame = -2
Query: 419 SCTDSCCVWQFCXXXXXXXRTRGGACLRTCSCPACKKRGPFRTSGCVWR*CACAQVY 249
SC++ CC+ Q C GG C+ C P KK T C R C Y
Sbjct: 129 SCSNGCCLGQRC--------LNGGTCVEHCEDPK-KKFSCACTPSCSGRTCESCGTY 176
>SB_33866| Best HMM Match : NOGCT (HMM E-Value=6.8)
Length = 234
Score = 27.9 bits (59), Expect = 8.5
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 7/47 (14%)
Frame = +2
Query: 242 HEDIPEH---KHIIAKHNQKYEMGL----VSYKLGMNKYGDMLHHEF 361
+ED EH KHI +HN +Y + + YKL N +GD+ EF
Sbjct: 55 YEDDSEHRRRKHIF-RHNVRYIRSMKRRSLPYKLEPNHFGDLTDDEF 100
>SB_19371| Best HMM Match : C_tripleX (HMM E-Value=0.041)
Length = 942
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/40 (30%), Positives = 14/40 (35%)
Frame = -2
Query: 434 GRSHPSCTDSCCVWQFCXXXXXXXRTRGGACLRTCSCPAC 315
GR CT C+ FC GG C C+ C
Sbjct: 254 GRCWQDCTGGKCLNMFCNSRMCIQSCGGGGCKMRCNALKC 293
>SB_10156| Best HMM Match : DSL (HMM E-Value=3.3e-35)
Length = 681
Score = 27.9 bits (59), Expect = 8.5
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +3
Query: 471 CRSRWTGGSTAPSRHSRTKGSVAHAGPFSTTGSFGRTALPS-VRLPGVASSEQNLHRLLG 647
C WTG + S+HS++ S+ STT + +PS V LP + S L +L
Sbjct: 377 CIPEWTGNNCTSSKHSQS--SIFPELLISTTTYSSYSKIPSTVILPSASPSRWRLTQLSS 434
Query: 648 SS 653
S
Sbjct: 435 QS 436
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,201,521
Number of Sequences: 59808
Number of extensions: 482167
Number of successful extensions: 1631
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1362
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1606
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1865706635
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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