Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0134
         (708 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    27   0.44 
Y17703-1|CAA76823.1|  111|Anopheles gambiae D7r1 protein protein.      27   0.58 
AY045760-1|AAK84942.1|  165|Anopheles gambiae D7-related 1 prote...    27   0.58 
AJ133852-1|CAB39727.1|  165|Anopheles gambiae D7-related 1 prote...    27   0.58 
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    26   1.3  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    25   3.1  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    24   4.1  
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              23   7.1  
AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    23   7.1  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   9.4  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    23   9.4  

>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 27.5 bits (58), Expect = 0.44
 Identities = 19/54 (35%), Positives = 21/54 (38%)
 Frame = +3

Query: 492 GSTAPSRHSRTKGSVAHAGPFSTTGSFGRTALPSVRLPGVASSEQNLHRLLGSS 653
           G      H   KG     GP    G+FG   LP  +  G   SE  LH L G S
Sbjct: 329 GQVGERGHKGEKGLPGQPGPRGRDGNFGPVGLPGQK--GDRGSE-GLHGLKGQS 379


>Y17703-1|CAA76823.1|  111|Anopheles gambiae D7r1 protein protein.
          Length = 111

 Score = 27.1 bits (57), Expect = 0.58
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +2

Query: 350 HHEFVKTMNGFNKTAKHNKNLYMKGGSVR 436
           +H+ +K +N   K  KH+ NL   GG  +
Sbjct: 75  YHKLIKPLNAIEKDRKHDFNLEKCGGQTQ 103


>AY045760-1|AAK84942.1|  165|Anopheles gambiae D7-related 1 protein
           protein.
          Length = 165

 Score = 27.1 bits (57), Expect = 0.58
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +2

Query: 350 HHEFVKTMNGFNKTAKHNKNLYMKGGSVR 436
           +H+ +K +N   K  KH+ NL   GG  +
Sbjct: 75  YHKLIKPLNAIEKDRKHDFNLEKCGGQTQ 103


>AJ133852-1|CAB39727.1|  165|Anopheles gambiae D7-related 1 protein
           protein.
          Length = 165

 Score = 27.1 bits (57), Expect = 0.58
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +2

Query: 350 HHEFVKTMNGFNKTAKHNKNLYMKGGSVR 436
           +H+ +K +N   K  KH+ NL   GG  +
Sbjct: 75  YHKLIKPLNAIEKDRKHDFNLEKCGGQTQ 103


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 13/49 (26%), Positives = 25/49 (51%)
 Frame = +1

Query: 262 QAHHRQTQPEVRNGPRFLQAGHEQVRRHAPPRVREDYERLQQNCQTQQE 408
           Q   +Q +P  +   +  Q   +Q  R+ PP++R+  ++ Q   Q QQ+
Sbjct: 271 QQRQQQQRPRQQQQQQ-QQQQQQQGERYVPPQLRQQRQQQQHQQQQQQQ 318



 Score = 25.4 bits (53), Expect = 1.8
 Identities = 13/49 (26%), Positives = 24/49 (48%)
 Frame = +1

Query: 262 QAHHRQTQPEVRNGPRFLQAGHEQVRRHAPPRVREDYERLQQNCQTQQE 408
           Q    Q Q + +  PR      +Q +    PR+++  ++ QQ+ Q QQ+
Sbjct: 365 QQQQWQQQQQQQQQPRQSLPHRKQTQLQLSPRLQQQQQQQQQSQQQQQQ 413



 Score = 25.0 bits (52), Expect = 2.3
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = +1

Query: 316 QAGHEQVRRHAPPRVREDYERLQQNCQTQQE 408
           Q   +Q  R+ PP++R+  ++ Q+  Q QQ+
Sbjct: 255 QQQQQQGERYVPPQLRQQRQQQQRPRQQQQQ 285



 Score = 24.2 bits (50), Expect = 4.1
 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
 Frame = +1

Query: 262 QAHHRQTQPEVRNGPRFLQAGHEQVRRHAPPRVREDYE---RLQQNCQTQQESVHEGWER 432
           Q  H+Q Q + +      Q   +Q R+  P R +   +   RLQQ  Q QQ+S  +  ++
Sbjct: 359 QQQHQQQQQQWQQQ----QQQQQQPRQSLPHRKQTQLQLSPRLQQQQQQQQQSQQQQQQQ 414

Query: 433 PR 438
           P+
Sbjct: 415 PQ 416


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +1

Query: 358 VREDYERLQQNCQTQQESVHEGWERPRG 441
           ++EDY RL+   Q  +E     +++ RG
Sbjct: 174 LKEDYNRLKHEMQMAEEETQFTYQKKRG 201


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +1

Query: 304 PRFLQAGHEQVRRHAPPRVREDYER 378
           PR+LQ   ++++RH   R RE  +R
Sbjct: 700 PRYLQVSMDELKRHTQQR-REQLQR 723


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 12/50 (24%), Positives = 22/50 (44%)
 Frame = +1

Query: 259 AQAHHRQTQPEVRNGPRFLQAGHEQVRRHAPPRVREDYERLQQNCQTQQE 408
           AQ  H       R GP+  +   +Q +     + ++  ++ QQ  Q QQ+
Sbjct: 202 AQGAHSSRNRRGRQGPQQQEQRQQQQQHQQREQQQQQQQQQQQQQQQQQQ 251



 Score = 23.0 bits (47), Expect = 9.4
 Identities = 13/55 (23%), Positives = 24/55 (43%)
 Frame = +1

Query: 262 QAHHRQTQPEVRNGPRFLQAGHEQVRRHAPPRVREDYERLQQNCQTQQESVHEGW 426
           Q    Q Q + +   +  Q   ++V++      R+  ++ QQ  Q QQ+   E W
Sbjct: 256 QQREWQQQQQQQQHQQREQQQQQRVQQQNQQHQRQQQQQQQQRQQQQQQEQQELW 310


>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = +2

Query: 581 STSVSPATWCRFFGAKPSSTAREQLRGTTGCNRGGS 688
           S++ + A W R     P S+     R ++ CN   S
Sbjct: 24  SSAANFAAWLRGNSGSPLSSISSSSRNSSSCNNSSS 59


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +2

Query: 593 SPATWCRFFGAKPSSTAREQLRG 661
           SPA  CR   +KP+ T +    G
Sbjct: 228 SPAEQCRILASKPAETIKIDTSG 250


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +2

Query: 593 SPATWCRFFGAKPSSTAREQLRG 661
           SPA  CR   +KP+ T +    G
Sbjct: 229 SPAEQCRILASKPAETIKIDTSG 251


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 745,638
Number of Sequences: 2352
Number of extensions: 16331
Number of successful extensions: 32
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72340815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)