Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0131
(415 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 117 8e-28
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 110 7e-26
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 84 9e-18
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 75 6e-15
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 73 2e-14
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 73 2e-14
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 67 1e-12
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 60 1e-10
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 60 1e-10
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 58 4e-10
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 54 9e-09
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 53 2e-08
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 53 2e-08
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 52 3e-08
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 51 6e-08
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 49 3e-07
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 48 4e-07
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 45 4e-06
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 44 7e-06
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 44 9e-06
SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces ... 30 0.16
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 28 0.66
SPAC3H1.01c |orp3|orc3, SPAP14E8.06c|origin recognition complex ... 27 1.2
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 26 2.0
SPAC4A8.10 |||lipase |Schizosaccharomyces pombe|chr 1|||Manual 26 2.0
SPCC970.04c |mob2||protein kinase activator Mob2|Schizosaccharom... 26 2.7
SPAC30C2.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 3.5
SPAC4G8.06c |trm12||tRNA methyltransferase Trm12 |Schizosaccharo... 25 3.5
SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1 |Schizosacc... 25 4.7
SPBC1198.05 |||guanylate kinase |Schizosaccharomyces pombe|chr 2... 25 6.1
SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces p... 25 6.1
SPBC26H8.08c |grn1||GTPase Grn1 |Schizosaccharomyces pombe|chr 2... 24 8.1
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 117 bits (281), Expect = 8e-28
Identities = 56/83 (67%), Positives = 68/83 (81%)
Frame = +1
Query: 43 MAKKTYDLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKL 222
M+ K+YD KLLLIGDSGVGK+C+L RFS++ FT +FI+TIGIDFKI+T+EL GK+IKL
Sbjct: 1 MSTKSYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKL 60
Query: 223 QIWDTAGQERFTPSRRRITAALW 291
QIWDTAGQERF R IT A +
Sbjct: 61 QIWDTAGQERF----RTITTAYY 79
Score = 75.8 bits (178), Expect = 3e-15
Identities = 28/51 (54%), Positives = 45/51 (88%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 404
F TITT+YYRGAMGI+L+YD+T++K+FD++ W N+++HA+E+V K+++G
Sbjct: 71 FRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIG 121
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 110 bits (265), Expect = 7e-26
Identities = 48/66 (72%), Positives = 58/66 (87%)
Frame = +1
Query: 58 YDLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDT 237
YD FKLLLIGDSGVGK+C+L RF+D+ +T ++ISTIG+DFKI+T EL GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDT 64
Query: 238 AGQERF 255
AGQERF
Sbjct: 65 AGQERF 70
Score = 65.7 bits (153), Expect = 3e-12
Identities = 25/51 (49%), Positives = 42/51 (82%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 404
F TIT+SYYRGA GI++VYD+T++ +F+++ +WL+ ID +A E V ++++G
Sbjct: 70 FRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVG 120
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 83.8 bits (198), Expect = 9e-18
Identities = 42/78 (53%), Positives = 53/78 (67%)
Frame = +1
Query: 58 YDLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDT 237
YD FK +LIGDSGVGK+ +L RF+ N F STIG++F + + L KKIK QIWDT
Sbjct: 7 YDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDT 66
Query: 238 AGQERFTPSRRRITAALW 291
AGQER+ R IT+A +
Sbjct: 67 AGQERY----RAITSAYY 80
Score = 62.5 bits (145), Expect = 3e-11
Identities = 22/51 (43%), Positives = 40/51 (78%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 404
+ IT++YYRGA+G ++VYDIT + +FD++ +WL+ + EHA+ ++ M++G
Sbjct: 72 YRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVG 122
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 74.5 bits (175), Expect = 6e-15
Identities = 32/62 (51%), Positives = 45/62 (72%)
Frame = +1
Query: 70 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQE 249
FKL+ +G+ VGKT ++ RF + F T+ +TIGIDF KT+ L + ++LQ+WDTAGQE
Sbjct: 12 FKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 71
Query: 250 RF 255
RF
Sbjct: 72 RF 73
Score = 39.5 bits (88), Expect = 2e-04
Identities = 16/51 (31%), Positives = 30/51 (58%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 404
F ++ SY R + ++VYDITN +F + KW+ ++ +DV +++G
Sbjct: 73 FRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDVRAERGDDVIIVLVG 123
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 72.9 bits (171), Expect = 2e-14
Identities = 35/75 (46%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Frame = +1
Query: 43 MAKKTYDLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVEL----RGK 210
M K++YD K++L G SG GK+C+L RF N + T+GIDF + + + + K
Sbjct: 1 MDKESYDYLVKIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQK 60
Query: 211 KIKLQIWDTAGQERF 255
+IKLQIWDTAGQE+F
Sbjct: 61 RIKLQIWDTAGQEKF 75
Score = 48.4 bits (110), Expect = 4e-07
Identities = 19/51 (37%), Positives = 33/51 (64%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 404
F ++ +YYRGA G +LVYD+TN+ +F+++ WL +I A + ++ G
Sbjct: 75 FRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDIRAMAPSTICVVLAG 125
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 72.5 bits (170), Expect = 2e-14
Identities = 31/61 (50%), Positives = 45/61 (73%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 252
K++++GDSGVGKTC++ +F + F+ + +TIG DF K V + K + LQ+WDTAGQER
Sbjct: 10 KVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQER 69
Query: 253 F 255
F
Sbjct: 70 F 70
Score = 36.7 bits (81), Expect = 0.001
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANED 383
F ++ ++YRGA ++VY++ N K+FD + W + ++D
Sbjct: 70 FQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTSQD 113
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 66.9 bits (156), Expect = 1e-12
Identities = 33/71 (46%), Positives = 48/71 (67%)
Frame = +1
Query: 43 MAKKTYDLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKL 222
MA K L K++++G+SGVGKT I+ ++ + F+ + +TIG DF K V + K + L
Sbjct: 1 MAGKKKHL-LKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTL 59
Query: 223 QIWDTAGQERF 255
Q+WDTAGQERF
Sbjct: 60 QLWDTAGQERF 70
Score = 36.3 bits (80), Expect = 0.002
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKW 350
F ++ ++YRGA +LVYD+ N K+F+ + W
Sbjct: 70 FQSLGVAFYRGADCCVLVYDVNNSKSFETLDSW 102
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 60.1 bits (139), Expect = 1e-10
Identities = 30/70 (42%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Frame = +1
Query: 49 KKTYDLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVEL-RGKKIKLQ 225
K + KL+L+GDS VGK+ ++ RF + F STIG F +T+ + +KL+
Sbjct: 8 KNVVTINQKLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLE 67
Query: 226 IWDTAGQERF 255
IWDTAGQER+
Sbjct: 68 IWDTAGQERY 77
Score = 33.1 bits (72), Expect = 0.018
Identities = 13/51 (25%), Positives = 25/51 (49%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 404
+ ++ YYR A ++VYDIT + + W++ + A E + + G
Sbjct: 77 YKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAG 127
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 60.1 bits (139), Expect = 1e-10
Identities = 27/67 (40%), Positives = 43/67 (64%)
Frame = +1
Query: 55 TYDLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWD 234
T +L KL+++GD GKTC+L FS F ++ T+ ++ + VE+ G+ I+L +WD
Sbjct: 2 TTELRRKLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENY-VADVEVDGRHIELALWD 60
Query: 235 TAGQERF 255
TAGQE +
Sbjct: 61 TAGQEDY 67
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 58.4 bits (135), Expect = 4e-10
Identities = 25/65 (38%), Positives = 42/65 (64%)
Frame = +1
Query: 61 DLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTA 240
+L KL+++GD GKTC+L FS F ++ T+ ++ + VE+ G+ ++L +WDTA
Sbjct: 4 ELRRKLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENY-VADVEVDGRHVELALWDTA 62
Query: 241 GQERF 255
GQE +
Sbjct: 63 GQEDY 67
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 54.0 bits (124), Expect = 9e-09
Identities = 22/65 (33%), Positives = 36/65 (55%)
Frame = +1
Query: 61 DLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTA 240
++ K+ +IGDS +GKT ++ + F T+G++F KT+ +R +I IWD
Sbjct: 8 NVTIKVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLG 67
Query: 241 GQERF 255
GQ F
Sbjct: 68 GQREF 72
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 53.2 bits (122), Expect = 2e-08
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIK-TVELRGKKIKLQIWDTAGQE 249
KL+++GD G GKTC+L FS F ++ T+ ++ T K I+L +WDTAGQE
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQE 75
Query: 250 RF 255
+
Sbjct: 76 EY 77
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 53.2 bits (122), Expect = 2e-08
Identities = 25/75 (33%), Positives = 43/75 (57%)
Frame = +1
Query: 49 KKTYDLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQI 228
+ TY +KL+++GD GVGK+ + + +HF + TI ++ K E+ G+ L +
Sbjct: 2 RSTYLREYKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYR-KKCEIDGEGALLDV 60
Query: 229 WDTAGQERFTPSRRR 273
DTAGQE ++ R +
Sbjct: 61 LDTAGQEEYSAMREQ 75
Score = 31.1 bits (67), Expect = 0.071
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMIL 401
+ + Y R G +LVY+IT+ +FD+I + + I ++D ++L
Sbjct: 69 YSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVL 118
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 52.4 bits (120), Expect = 3e-08
Identities = 22/61 (36%), Positives = 39/61 (63%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 252
KL+++GD GKT +L F+ +F T ++ T+ ++ + + GK ++L +WDTAGQE
Sbjct: 10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENY-VSDCRVDGKSVQLALWDTAGQEE 68
Query: 253 F 255
+
Sbjct: 69 Y 69
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 51.2 bits (117), Expect = 6e-08
Identities = 23/61 (37%), Positives = 34/61 (55%)
Frame = +1
Query: 70 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQE 249
FKL+L+GD G GKT + R F +I+T+G++ +I +WDTAGQE
Sbjct: 10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQE 69
Query: 250 R 252
+
Sbjct: 70 K 70
Score = 25.4 bits (53), Expect = 3.5
Identities = 9/30 (30%), Positives = 20/30 (66%)
Frame = +3
Query: 273 YYRGAMGIMLVYDITNEKTFDDIVKWLRNI 362
Y +G GI++ +D+T+ T+ ++ W R++
Sbjct: 79 YIQGQCGIIM-FDVTSRITYKNVPHWWRDL 107
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 48.8 bits (111), Expect = 3e-07
Identities = 21/61 (34%), Positives = 39/61 (63%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 252
K +++GD VGKTC+L ++ N F + ++ T+ ++ + TV + + L ++DTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYAV-TVMIGDEPYTLGLFDTAGQED 63
Query: 253 F 255
+
Sbjct: 64 Y 64
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 48.4 bits (110), Expect = 4e-07
Identities = 23/65 (35%), Positives = 38/65 (58%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 252
K++++GD GKT +L F+ +F + TI ++ I + + G I+L +WDTAGQE
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENY-IHDIFVDGNSIELSLWDTAGQEE 73
Query: 253 FTPSR 267
+ R
Sbjct: 74 YDQLR 78
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 45.2 bits (102), Expect = 4e-06
Identities = 24/63 (38%), Positives = 35/63 (55%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 252
++L++G GKT IL++ TT I TIG F ++TVE R I +WD GQ++
Sbjct: 19 RILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVETVEYRN--ISFTVWDVGGQDK 73
Query: 253 FTP 261
P
Sbjct: 74 IRP 76
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 44.4 bits (100), Expect = 7e-06
Identities = 18/62 (29%), Positives = 38/62 (61%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 252
++ ++G VGK+ + ++ +NHF ++ TI F K ++ +G++ +I DTAGQ+
Sbjct: 8 RIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTFS-KNIKYKGQEFATEIIDTAGQDE 66
Query: 253 FT 258
++
Sbjct: 67 YS 68
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 44.0 bits (99), Expect = 9e-06
Identities = 23/63 (36%), Positives = 35/63 (55%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 252
++L++G GKT IL++ N T I T+G F ++TV K IK +WD GQ++
Sbjct: 23 RILMLGLDAAGKTTILYKLKLNQSVVT-IPTVG--FNVETVTY--KNIKFNVWDVGGQDK 77
Query: 253 FTP 261
P
Sbjct: 78 IRP 80
>SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 308
Score = 29.9 bits (64), Expect = 0.16
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCIL-FRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQE 249
K+LL+G SG GK+ + FS+ T ID + V G + L +WD GQE
Sbjct: 4 KVLLMGRSGSGKSSMRSIVFSNYVAKDTRRLGATIDIEHSHVRFLGNLV-LNLWDCGGQE 62
Query: 250 RF 255
F
Sbjct: 63 AF 64
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 27.9 bits (59), Expect = 0.66
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Frame = +1
Query: 70 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGID-----FKIKTVELRGKKIKLQ 225
F L+L G+SG+GKT F + F+TT S +G + KTVE+ K +L+
Sbjct: 29 FTLMLCGESGLGKT----TFCNTLFSTTIKSHMGPEKVRAKHAEKTVEIEITKAELE 81
>SPAC3H1.01c |orp3|orc3, SPAP14E8.06c|origin recognition complex
subunit Orp3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 27.1 bits (57), Expect = 1.2
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 309 DITNEKTFDDIVKWLRNIDEHANEDVEK 392
+IT T+D + LR + EHA+E V++
Sbjct: 63 EITTHTTYDSNARVLRQLCEHASEPVDE 90
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 26.2 bits (55), Expect = 2.0
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +1
Query: 79 LLIGDSGVGKTCIL 120
+L+GD+ GKTCIL
Sbjct: 1873 ILVGDTATGKTCIL 1886
>SPAC4A8.10 |||lipase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 723
Score = 26.2 bits (55), Expect = 2.0
Identities = 16/56 (28%), Positives = 24/56 (42%)
Frame = -3
Query: 296 DAHSAAVIRRRDGVKRSCPAVSHIWSFIFLPLNSTVFILKSIPIVEIKVVVKWLSE 129
DAH+ ++RRR + H+ +F ST + + I E WLSE
Sbjct: 661 DAHNTMIVRRRFPNAYGWTVIKHLTEILFEQNTSTAY-MNPISFDE-TTTAAWLSE 714
>SPCC970.04c |mob2||protein kinase activator
Mob2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 244
Score = 25.8 bits (54), Expect = 2.7
Identities = 13/51 (25%), Positives = 27/51 (52%)
Frame = -3
Query: 251 RSCPAVSHIWSFIFLPLNSTVFILKSIPIVEIKVVVKWLSENLNNMHVFPT 99
++CP +S +F + L++ + I+ V+ W+ L++ +VFPT
Sbjct: 111 KTCPVMSAAANFDYTWLDNNRKPVHLPAPQYIEYVLAWIENRLHDQNVFPT 161
>SPAC30C2.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 25.4 bits (53), Expect = 3.5
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 40 KMAKKTYDLXFKLLLIGDSGVGKTCILFRFSDNH 141
K + T D+ F+L+L+ D G K +L F NH
Sbjct: 30 KQYQSTKDVTFRLVLVQDIGDRKKTVL--FDSNH 61
>SPAC4G8.06c |trm12||tRNA methyltransferase Trm12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 418
Score = 25.4 bits (53), Expect = 3.5
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +2
Query: 35 FVKWPKKHTTCXSNCFSSVTPELEKRAY 118
F K K+T C +NC S +P + Y
Sbjct: 386 FSKMLAKNTVCVTNCVKSFSPRVSHIVY 413
>SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 25.0 bits (52), Expect = 4.7
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +1
Query: 76 LLLIGDSGVGKTCILFRFSDN 138
L+++GD+G+ T +L + DN
Sbjct: 973 LMIVGDAGMSNTPLLLQLQDN 993
>SPBC1198.05 |||guanylate kinase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 202
Score = 24.6 bits (51), Expect = 6.1
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +1
Query: 43 MAKKTYDLXFK-LLLIGDSGVGKTCILFRFSDNH 141
+A K L K +++ G SGVGK+ +L R +H
Sbjct: 9 VASKLVTLKLKPVVVFGPSGVGKSTLLKRLLKDH 42
>SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 464
Score = 24.6 bits (51), Expect = 6.1
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +1
Query: 64 LXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDF--KIKTVELRGKKIKLQIWDT 237
+ L+++G+S +GKT + F ++ T F +DF T+ +K L I DT
Sbjct: 117 IDINLIVVGESSLGKTTFVNSFLQSN-DTNFRPKKTMDFVEHKATLSDGDQKFNLTIVDT 175
Query: 238 AG 243
G
Sbjct: 176 PG 177
>SPBC26H8.08c |grn1||GTPase Grn1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 470
Score = 24.2 bits (50), Expect = 8.1
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = -3
Query: 191 VFILKSIPIVEIKVVVKWLSENLNNMHVFPTPESPMRSS 75
+F++ I +V +V+ KW++ L N FPT PMRS+
Sbjct: 198 IFVINKIDLVPSEVLNKWVT-YLRNF--FPT--IPMRSA 231
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,862,084
Number of Sequences: 5004
Number of extensions: 38193
Number of successful extensions: 172
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 161
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 144287194
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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