Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0131
(415 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 105 1e-23
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 101 3e-22
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 93 6e-20
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 3e-19
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 88 3e-18
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 84 5e-17
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 84 5e-17
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 83 1e-16
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 80 6e-16
SB_36483| Best HMM Match : Ras (HMM E-Value=0) 78 3e-15
SB_53183| Best HMM Match : Ras (HMM E-Value=0) 77 4e-15
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 77 8e-15
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 77 8e-15
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 5e-14
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 73 9e-14
SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05) 73 1e-13
SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) 71 3e-13
SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 2e-12
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 5e-12
SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08) 65 2e-11
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 64 4e-11
SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30) 63 8e-11
SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 1e-10
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 62 2e-10
SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 5e-10
SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42) 58 2e-09
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 3e-09
SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22) 56 1e-08
SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09) 56 1e-08
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 54 6e-08
SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40) 52 2e-07
SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 2e-07
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 51 4e-07
SB_6223| Best HMM Match : Ras (HMM E-Value=0) 50 8e-07
SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 2e-06
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 48 3e-06
SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31) 46 1e-05
SB_11757| Best HMM Match : Ras (HMM E-Value=0) 46 2e-05
SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_56255| Best HMM Match : Arf (HMM E-Value=0) 45 2e-05
SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21) 44 5e-05
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 44 5e-05
SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 44 5e-05
SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10) 44 5e-05
SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 7e-05
SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19) 43 1e-04
SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35) 42 3e-04
SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11) 42 3e-04
SB_12680| Best HMM Match : Ras (HMM E-Value=3.4e-05) 41 5e-04
SB_29274| Best HMM Match : Ras (HMM E-Value=2.5e-05) 40 8e-04
SB_37042| Best HMM Match : Arf (HMM E-Value=0) 40 0.001
SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06) 40 0.001
SB_11310| Best HMM Match : Arf (HMM E-Value=0) 39 0.001
SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07) 39 0.001
SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.003
SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.006
SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35) 37 0.008
SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15) 36 0.013
SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31) 36 0.017
SB_53421| Best HMM Match : Arf (HMM E-Value=0) 35 0.023
SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.023
SB_18358| Best HMM Match : Arf (HMM E-Value=0) 34 0.040
SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.053
SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19) 33 0.070
SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.093
SB_52502| Best HMM Match : GTP_CDC (HMM E-Value=1.9e-06) 33 0.12
SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36) 33 0.12
SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.12
SB_54000| Best HMM Match : MMR_HSR1 (HMM E-Value=1.8) 33 0.12
SB_31439| Best HMM Match : Ras (HMM E-Value=4.7) 33 0.12
SB_53179| Best HMM Match : BTB (HMM E-Value=3.3e-21) 32 0.16
SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13) 32 0.16
SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.16
SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.38
SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7) 31 0.50
SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35) 31 0.50
SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.50
SB_36446| Best HMM Match : GTP_CDC (HMM E-Value=0) 30 0.87
SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96) 30 0.87
SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.1
SB_18788| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.5
SB_59377| Best HMM Match : Exo_endo_phos (HMM E-Value=1.7) 28 2.6
SB_33594| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.6
SB_15761| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.6
SB_11841| Best HMM Match : Ras (HMM E-Value=0) 28 3.5
SB_57110| Best HMM Match : 7tm_1 (HMM E-Value=4.9e-22) 28 3.5
SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31) 28 3.5
SB_45581| Best HMM Match : Ras (HMM E-Value=0.069) 28 3.5
SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.6
SB_44879| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.6
SB_1071| Best HMM Match : Ras (HMM E-Value=0) 27 4.6
SB_45261| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
SB_13497| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 105 bits (253), Expect = 1e-23
Identities = 51/80 (63%), Positives = 63/80 (78%)
Frame = +1
Query: 58 YDLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDT 237
YD FKLLLIGDSGVGK+ +L RF+D+ F+ T+ISTIG+DFKI+T+ + GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSSLLLRFADDTFSNTYISTIGVDFKIRTLTVDGKTIKLQIWDT 64
Query: 238 AGQERFTPSRRRITAALWAS 297
AGQERF R +T A + S
Sbjct: 65 AGQERF----RTLTTAYYRS 80
Score = 56.4 bits (130), Expect = 9e-09
Identities = 22/51 (43%), Positives = 35/51 (68%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 404
F T+TT+YYR A GI+L+YD+ +TF + +WL + E+A E V +++G
Sbjct: 70 FRTLTTAYYRSAHGIVLIYDVNESETFLHLSQWLEEVSEYACEGVNTILVG 120
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 101 bits (241), Expect = 3e-22
Identities = 47/82 (57%), Positives = 62/82 (75%)
Frame = +1
Query: 46 AKKTYDLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQ 225
A + +D FKLL+IG+S VGKT LFR++D+ FT+ F+ST+GIDFK+KTV K++KLQ
Sbjct: 14 ADQNFDYMFKLLIIGNSAVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRNDKRVKLQ 73
Query: 226 IWDTAGQERFTPSRRRITAALW 291
IWDTAGQER+ R IT A +
Sbjct: 74 IWDTAGQERY----RTITTAYY 91
Score = 48.8 bits (111), Expect = 2e-06
Identities = 19/30 (63%), Positives = 26/30 (86%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDI 341
+ TITT+YYRGAMG +L+YDITNE++F +
Sbjct: 83 YRTITTAYYRGAMGFILMYDITNEESFQAV 112
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 93.5 bits (222), Expect = 6e-20
Identities = 38/51 (74%), Positives = 48/51 (94%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 404
FHTITT+YYRGAMGIMLVYD+TNEK+F +I KWL+ ID+HANEDV++M++G
Sbjct: 18 FHTITTAYYRGAMGIMLVYDVTNEKSFSNISKWLKKIDDHANEDVKRMLVG 68
Score = 40.7 bits (91), Expect = 5e-04
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 205 GKKIKLQIWDTAGQERF 255
GKKIKLQIWDTAGQERF
Sbjct: 2 GKKIKLQIWDTAGQERF 18
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 91.5 bits (217), Expect = 3e-19
Identities = 49/87 (56%), Positives = 59/87 (67%), Gaps = 21/87 (24%)
Frame = +1
Query: 58 YDLXFKLLLIGDSGVGKTCILFRFS---------------------DNHFTTTFISTIGI 174
YD FKLLLIGDSGVGK+C+L RF+ D+ +T ++ISTIG+
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFALSLAQKLLLFRIYSHPTLSQQDDTYTESYISTIGV 64
Query: 175 DFKIKTVELRGKKIKLQIWDTAGQERF 255
DFKI+T+EL GK IKLQIWDTAGQERF
Sbjct: 65 DFKIRTIELDGKTIKLQIWDTAGQERF 91
Score = 68.1 bits (159), Expect = 3e-12
Identities = 26/51 (50%), Positives = 44/51 (86%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 404
F TIT+SYYRGA GI++VYD+T++++F+++ +WL+ ID +A E+V K+++G
Sbjct: 91 FRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYACENVNKLLVG 141
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 87.8 bits (208), Expect = 3e-18
Identities = 37/66 (56%), Positives = 51/66 (77%)
Frame = +1
Query: 58 YDLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDT 237
Y FK++L+GD+ VGKTC++ +F+ +F TIG+DF IKTV++ G+K+KLQIWDT
Sbjct: 4 YSYLFKIILVGDANVGKTCLVRQFTKGYFPPNQGPTIGVDFTIKTVDVDGEKVKLQIWDT 63
Query: 238 AGQERF 255
AGQERF
Sbjct: 64 AGQERF 69
Score = 52.8 bits (121), Expect = 1e-07
Identities = 21/51 (41%), Positives = 36/51 (70%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 404
F +IT SYY A G+++ YDITN+K+F+ + +WL + + + ++DV I+G
Sbjct: 69 FRSITQSYYHNADGVIVTYDITNKKSFESLPQWLDDTNRYTSKDVLIAIVG 119
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 83.8 bits (198), Expect = 5e-17
Identities = 39/78 (50%), Positives = 56/78 (71%)
Frame = +1
Query: 58 YDLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDT 237
YD +K++LIGDSGVGK+ +L RF+ N F STIG++F +++++ GK IK Q+WDT
Sbjct: 9 YDYLYKIVLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQVEGKIIKAQVWDT 68
Query: 238 AGQERFTPSRRRITAALW 291
AGQER+ R IT+A +
Sbjct: 69 AGQERY----RAITSAYY 82
Score = 63.7 bits (148), Expect = 6e-11
Identities = 24/51 (47%), Positives = 38/51 (74%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 404
+ IT++YYRGA+G +LVYD+T +KTF D+ +WL + EHA+ + M++G
Sbjct: 74 YRAITSAYYRGAVGAVLVYDLTKQKTFQDVERWLLEVREHADPTIVVMLVG 124
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 83.8 bits (198), Expect = 5e-17
Identities = 39/70 (55%), Positives = 52/70 (74%), Gaps = 3/70 (4%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 252
K+L++G+SGVGK+ +L RF+D+ F +TIG+DFK+KT+ + G K KL IWDTAGQER
Sbjct: 10 KILIVGESGVGKSSLLLRFTDDTFDPDIGATIGVDFKVKTLTVEGNKAKLAIWDTAGQER 69
Query: 253 F---TPSRRR 273
F TPS R
Sbjct: 70 FRTLTPSYYR 79
Score = 58.8 bits (136), Expect = 2e-09
Identities = 23/52 (44%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHA-NEDVEKMILG 404
F T+T SYYRGA G++LVYD + +TFD + +WL ++ ++ +D+ KM++G
Sbjct: 70 FRTLTPSYYRGAQGVILVYDTNSRETFDKLEEWLNEVEMYSTKKDIVKMLVG 121
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 82.6 bits (195), Expect = 1e-16
Identities = 36/68 (52%), Positives = 51/68 (75%)
Frame = +1
Query: 52 KTYDLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIW 231
KT + FK++ IGDSGVGK+ L RF + + +F +TIG+DF+IKT+ + G+ I +Q+W
Sbjct: 891 KTPERVFKVVFIGDSGVGKSSFLHRFCHDQWKPSFTATIGVDFQIKTMNVNGQCIAIQLW 950
Query: 232 DTAGQERF 255
DTAGQERF
Sbjct: 951 DTAGQERF 958
Score = 56.8 bits (131), Expect = 7e-09
Identities = 23/51 (45%), Positives = 36/51 (70%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 404
F +IT Y+R A GI++ YD+T E +F ++ KW+ +++E A E V KM+LG
Sbjct: 958 FRSITKQYFRKADGILIFYDVTAESSFTNLKKWMVSVEEGAEEGVAKMVLG 1008
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 80.2 bits (189), Expect = 6e-16
Identities = 35/65 (53%), Positives = 47/65 (72%)
Frame = +1
Query: 70 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQE 249
FK+++IGDS VGKTC+ +R F +TIG+DF K++EL G+ +KLQ+WDTAGQE
Sbjct: 47 FKIIIIGDSNVGKTCLAYRLCTGKFPERTETTIGVDFWEKSLELNGEFVKLQLWDTAGQE 106
Query: 250 RFTPS 264
RF S
Sbjct: 107 RFRKS 111
Score = 37.1 bits (82), Expect = 0.006
Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3
Query: 273 YYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHA-NEDVEKMILG 404
YYR ++ +YDIT + +F+ + W+ HA + DV K+++G
Sbjct: 116 YYRNVNAVVFMYDITRKCSFEALTTWIVEYRHHAYSGDVPKILIG 160
>SB_36483| Best HMM Match : Ras (HMM E-Value=0)
Length = 213
Score = 77.8 bits (183), Expect = 3e-15
Identities = 32/65 (49%), Positives = 47/65 (72%)
Frame = +1
Query: 61 DLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTA 240
D FK+L++GD VGK+ ++ RF D+ F +TIG+DF I +L GKK+KLQ+WDTA
Sbjct: 8 DYVFKVLVLGDCNVGKSSLIRRFHDDEFNAQLCTTIGVDFFIHDFDLDGKKVKLQLWDTA 67
Query: 241 GQERF 255
G+E++
Sbjct: 68 GEEKY 72
Score = 36.7 bits (81), Expect = 0.008
Identities = 15/52 (28%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVK-WLRNIDEHANEDVEKMILG 404
+ ++ S++RGA G +LV+D++ +++FD I WL + + D +++G
Sbjct: 72 YRALSRSFFRGADGALLVFDVSVKESFDSIRDYWLHEFHKVSGSDTITILVG 123
>SB_53183| Best HMM Match : Ras (HMM E-Value=0)
Length = 834
Score = 77.4 bits (182), Expect = 4e-15
Identities = 36/42 (85%), Positives = 38/42 (90%)
Frame = +1
Query: 43 MAKKTYDLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTI 168
MAKK+YD FKLLLIGDSGVGKTCILFRFSD+ F TTFISTI
Sbjct: 1 MAKKSYDYLFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTI 42
Score = 77.0 bits (181), Expect = 6e-15
Identities = 35/40 (87%), Positives = 37/40 (92%)
Frame = +3
Query: 285 AMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 404
A GIMLVYDIT EKTFD+I KWLRNI+EHANEDVEKMILG
Sbjct: 125 AEGIMLVYDITQEKTFDNISKWLRNIEEHANEDVEKMILG 164
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 76.6 bits (180), Expect = 8e-15
Identities = 37/76 (48%), Positives = 50/76 (65%), Gaps = 11/76 (14%)
Frame = +1
Query: 61 DLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTV-----------ELRG 207
+ K L +GDSGVGKT +L++++D+HF F+ TIGIDF+ K V RG
Sbjct: 104 EFLIKFLALGDSGVGKTSLLYQYTDSHFNPRFVPTIGIDFREKRVVHHPLNPDGERSTRG 163
Query: 208 KKIKLQIWDTAGQERF 255
++I LQ+WDTAGQERF
Sbjct: 164 QRIHLQLWDTAGQERF 179
Score = 48.8 bits (111), Expect = 2e-06
Identities = 18/41 (43%), Positives = 31/41 (75%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHA 374
F ++TT+++R AMG +LV+D+T+E++F +I WL + HA
Sbjct: 179 FRSLTTAFFRDAMGFLLVFDLTHEQSFVNIRNWLSQLQTHA 219
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 76.6 bits (180), Expect = 8e-15
Identities = 35/70 (50%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Frame = +1
Query: 49 KKTYDLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGK-KIKLQ 225
K Y F+++LIGDS VGK+ +L +F++ F T+G+DF ++ +EL+G +IKLQ
Sbjct: 7 KPKYFYQFRIILIGDSTVGKSSLLRQFTEGQFFENSDPTVGVDFHVRVLELKGDVRIKLQ 66
Query: 226 IWDTAGQERF 255
IWDTAGQERF
Sbjct: 67 IWDTAGQERF 76
Score = 45.6 bits (103), Expect = 2e-05
Identities = 19/52 (36%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANE-DVEKMILG 404
F +IT SYYR +G +++YDITN +F +++ W + + E +V M++G
Sbjct: 76 FRSITYSYYRNTVGCLIIYDITNRDSFVNVMDWYKEAKQCVEEAEVVFMLVG 127
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 73.7 bits (173), Expect = 5e-14
Identities = 29/62 (46%), Positives = 45/62 (72%)
Frame = +1
Query: 70 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQE 249
FK+L++GD GVGKT ++ RF+ +F ST+G+D + +++ G ++KLQ WDTAGQE
Sbjct: 12 FKVLVVGDPGVGKTSLIRRFTKGYFCDNSSSTVGVDVGTRVLDIHGDRVKLQCWDTAGQE 71
Query: 250 RF 255
+F
Sbjct: 72 KF 73
Score = 58.0 bits (134), Expect = 3e-09
Identities = 26/60 (43%), Positives = 39/60 (65%), Gaps = 4/60 (6%)
Frame = +3
Query: 237 CWAGA----FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 404
CW A F IT SYYR A ++LV+DITN TF I +WL N+ ++ N+++ K+++G
Sbjct: 64 CWDTAGQEKFRGITQSYYRNADAVILVFDITNRGTFASIPQWLMNVQKYTNKNILKVLVG 123
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 72.9 bits (171), Expect = 9e-14
Identities = 31/62 (50%), Positives = 44/62 (70%)
Frame = +1
Query: 70 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQE 249
FK++L GD+ VGK+ + R N F + ST+G+DF++KT+ + GK LQ+WDTAGQE
Sbjct: 443 FKIVLAGDAAVGKSSFILRLCRNRFHSALNSTLGVDFQMKTLVVDGKTYALQLWDTAGQE 502
Query: 250 RF 255
RF
Sbjct: 503 RF 504
Score = 47.2 bits (107), Expect = 5e-06
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 404
F +I SY+R A G++L+YD+T E +F D+ W+ I+E ++ V M+ G
Sbjct: 504 FRSIAKSYFRKADGVLLLYDVTCETSFLDVRDWVEAIEESCSKPVPIMLCG 554
>SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05)
Length = 68
Score = 72.5 bits (170), Expect = 1e-13
Identities = 32/60 (53%), Positives = 44/60 (73%)
Frame = +1
Query: 58 YDLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDT 237
YD FK++LIGDSGVGK+ +L RF+ N F STIG++F +++++ GK IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
>SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44)
Length = 212
Score = 71.3 bits (167), Expect = 3e-13
Identities = 31/62 (50%), Positives = 45/62 (72%)
Frame = +1
Query: 70 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQE 249
FK++L+G++GVGKT + +R +NHFT +TIGID K V++ K++ L +WDTAG E
Sbjct: 12 FKVVLLGEAGVGKTSLFYRLKENHFTPGRRNTIGIDSCSKFVKIGEKQVTLSVWDTAGVE 71
Query: 250 RF 255
RF
Sbjct: 72 RF 73
Score = 36.7 bits (81), Expect = 0.008
Identities = 12/49 (24%), Positives = 30/49 (61%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMI 398
F T+T +YYRGA +L++++ + + ++ W+ + DE + ++ ++
Sbjct: 73 FRTVTKNYYRGAHACILMFNVDDPGSLQYLLHWIHDTDEFCPDALKVLV 121
>SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 68.9 bits (161), Expect = 2e-12
Identities = 30/61 (49%), Positives = 43/61 (70%)
Frame = +1
Query: 58 YDLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDT 237
YD FK++LIGDSGVGK+ +L R++ N F +TIG++ + VE+ GK ++ QIWDT
Sbjct: 15 YDYLFKIVLIGDSGVGKSNLLSRYTKNEFHLGSKATIGVELAHRNVEIEGKTVRAQIWDT 74
Query: 238 A 240
A
Sbjct: 75 A 75
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 67.3 bits (157), Expect = 5e-12
Identities = 32/61 (52%), Positives = 42/61 (68%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 252
K++ +GD GVGK+ + RF + F + TIGIDF KTV L +++LQIWDTAGQER
Sbjct: 165 KIVFLGDQGVGKSSLAGRFIYDIFEEKYQPTIGIDFMTKTVLLDDFEVRLQIWDTAGQER 224
Query: 253 F 255
F
Sbjct: 225 F 225
Score = 35.9 bits (79), Expect = 0.013
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGQ*M 413
F + SY R + ++V+DITN +F+ + W++ + + E +I+G M
Sbjct: 225 FRCLIHSYIRDSEAALIVFDITNYTSFESVGDWVKMVRDERGEKAVIIIVGNKM 278
>SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08)
Length = 492
Score = 65.3 bits (152), Expect = 2e-11
Identities = 27/43 (62%), Positives = 35/43 (81%)
Frame = +3
Query: 276 YRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 404
Y GIMLVYDITN+K+F+ W+RNI+EHA++DVEKM+LG
Sbjct: 82 YEDDKGIMLVYDITNDKSFEKHQNWIRNIEEHASQDVEKMVLG 124
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 64.1 bits (149), Expect = 4e-11
Identities = 25/38 (65%), Positives = 35/38 (92%)
Frame = +1
Query: 142 FTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQERF 255
F+ ++I+TIG+DFKI+T+ + G+K+KLQIWDTAGQERF
Sbjct: 2 FSGSYITTIGVDFKIRTINIDGEKVKLQIWDTAGQERF 39
Score = 56.4 bits (130), Expect = 9e-09
Identities = 22/51 (43%), Positives = 39/51 (76%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 404
F TIT++YYRG G+++VYD+T+ TF ++ +WL ID++ +DV ++++G
Sbjct: 39 FRTITSTYYRGTHGVIVVYDVTSADTFVNVKRWLHEIDQNC-DDVIRILVG 88
>SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30)
Length = 517
Score = 63.3 bits (147), Expect = 8e-11
Identities = 24/51 (47%), Positives = 40/51 (78%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 404
F TIT+SYYRGA G+M+VYDIT ++++++ KWL ++ +A+E V +++G
Sbjct: 381 FRTITSSYYRGAHGVMIVYDITKRESYNNLHKWLMEVETYASEGVHMILVG 431
>SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 62.5 bits (145), Expect = 1e-10
Identities = 31/62 (50%), Positives = 38/62 (61%)
Frame = +1
Query: 82 LIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQERFTP 261
L D GVGK+ ++ RF F T TIG++F K V+L G+ LQIWDTAGQERF
Sbjct: 216 LSSDGGVGKSSLMNRFVCGKFDTQSFHTIGVEFLNKDVKLDGESYTLQIWDTAGQERFKS 275
Query: 262 SR 267
R
Sbjct: 276 LR 277
Score = 30.3 bits (65), Expect = 0.66
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHAN 377
F ++ T +YRG+ +LVY + + K+F ++ W + +A+
Sbjct: 273 FKSLRTPFYRGSDLCLLVYAVDDAKSFTNLSMWKKEFLYYAD 314
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 61.7 bits (143), Expect = 2e-10
Identities = 30/62 (48%), Positives = 40/62 (64%)
Frame = +1
Query: 70 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQE 249
FKL+L+G+S VGK+ ++ RF F STIG F +TV L +K +IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 250 RF 255
R+
Sbjct: 82 RY 83
Score = 45.2 bits (102), Expect = 2e-05
Identities = 16/45 (35%), Positives = 28/45 (62%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDV 386
+H++ YYRGA ++VYDITN+ TF W++ + A+ ++
Sbjct: 83 YHSLAPMYYRGAQAAIVVYDITNQDTFARAKTWVKELQRQASPNI 127
>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6116
Score = 60.5 bits (140), Expect = 5e-10
Identities = 24/61 (39%), Positives = 42/61 (68%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 252
KL+++GD GKTC+L FS + F ++ T+ ++ + +E+ GK+++L +WDTAGQE
Sbjct: 5931 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 5989
Query: 253 F 255
+
Sbjct: 5990 Y 5990
>SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42)
Length = 704
Score = 58.4 bits (135), Expect = 2e-09
Identities = 31/68 (45%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Frame = +1
Query: 58 YDLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFI-STIGI-DFKIKTVELRGKKIKLQIW 231
+D FK L+IG+SGVGK+C++ + + HF F+ ST+ + D + KKIKL I
Sbjct: 347 WDYEFKTLIIGNSGVGKSCLVNKLKNPHFDLKFVTSTVSMNDIFWEYFLYDNKKIKLTIG 406
Query: 232 DTAGQERF 255
DTAGQER+
Sbjct: 407 DTAGQERY 414
Score = 38.3 bits (85), Expect = 0.002
Identities = 17/53 (32%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKW--LRNIDEHANEDVEKMILG 404
+ +I +Y+RG G+ LV+DIT E TF + +W L A+ +++ +++G
Sbjct: 414 YFSILPAYFRGVQGVFLVFDITVEITFLQLHRWIDLARTTSGADSNIQLILVG 466
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 58.0 bits (134), Expect = 3e-09
Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Frame = +1
Query: 58 YDLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVE-LRGKKIKLQIWD 234
Y FK+L++GD GK + R+ +N + + TIG+DF +KT++ + I+LQIW
Sbjct: 15 YTRNFKVLVVGDILTGKQSFVKRYVNNIWHPLYKPTIGVDFALKTIQWAQNTTIRLQIWL 74
Query: 235 TAGQERFTPSRR 270
AGQERF+ R
Sbjct: 75 IAGQERFSSMTR 86
Score = 37.9 bits (84), Expect = 0.003
Identities = 15/55 (27%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDE----HANEDVEKMILG 404
F ++T YY+GA ++++D+ + T D +KW +++D H+ + V +++G
Sbjct: 81 FSSMTRVYYKGADACVVLFDLERQTTLDGAIKWKKDLDSKYKLHSRKPVPCILVG 135
>SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22)
Length = 159
Score = 56.0 bits (129), Expect = 1e-08
Identities = 21/51 (41%), Positives = 37/51 (72%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 404
+ IT++YYRGAMG +LVYDI +F ++ KW+ + +HA++D+ +++G
Sbjct: 5 YRAITSAYYRGAMGAVLVYDIAKGTSFMNLNKWVEELRQHASDDLSIILIG 55
>SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09)
Length = 181
Score = 56.0 bits (129), Expect = 1e-08
Identities = 21/51 (41%), Positives = 37/51 (72%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 404
+ IT++YYRGAMG +LVYDI +F ++ KW+ + +HA++D+ +++G
Sbjct: 5 YRAITSAYYRGAMGAVLVYDIAKGTSFMNLNKWVEELRQHASDDLSIILIG 55
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 53.6 bits (123), Expect = 6e-08
Identities = 20/51 (39%), Positives = 35/51 (68%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 404
F TIT SYYR G+++ YDIT TF ++++W ++ ++A E+ K+++G
Sbjct: 108 FRTITQSYYRSCNGVIIAYDITKCDTFKNVIRWGEDVQKYAPENAIKLLVG 158
Score = 37.9 bits (84), Expect = 0.003
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +1
Query: 214 IKLQIWDTAGQERFTPSRRRITAALWASCS 303
+KLQIWDTAGQERF R IT + + SC+
Sbjct: 95 VKLQIWDTAGQERF----RTITQSYYRSCN 120
>SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40)
Length = 1265
Score = 52.0 bits (119), Expect = 2e-07
Identities = 18/44 (40%), Positives = 33/44 (75%)
Frame = +3
Query: 273 YYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 404
YYRGA+G +LVYDI T++++ +WL+ + +HA+ ++ M++G
Sbjct: 2 YYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVG 45
>SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 51.6 bits (118), Expect = 2e-07
Identities = 22/61 (36%), Positives = 40/61 (65%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 252
K +++GD VGKTC+L ++ N F + ++ T+ ++ + TV + G+ L ++DTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 63
Query: 253 F 255
+
Sbjct: 64 Y 64
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 50.8 bits (116), Expect = 4e-07
Identities = 20/51 (39%), Positives = 35/51 (68%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 404
F ++T SYYRGA G +LVYDI++ +TF+ + WL + A+ ++ +++G
Sbjct: 157 FRSVTRSYYRGAAGALLVYDISSRETFNSLTNWLTDARTLASPNIVIILVG 207
Score = 50.0 bits (114), Expect = 8e-07
Identities = 21/31 (67%), Positives = 25/31 (80%)
Frame = +1
Query: 163 TIGIDFKIKTVELRGKKIKLQIWDTAGQERF 255
TIG++F K V + GK +KLQIWDTAGQERF
Sbjct: 127 TIGVEFGSKIVNVGGKSVKLQIWDTAGQERF 157
>SB_6223| Best HMM Match : Ras (HMM E-Value=0)
Length = 1665
Score = 50.0 bits (114), Expect = 8e-07
Identities = 25/75 (33%), Positives = 42/75 (56%)
Frame = +1
Query: 49 KKTYDLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQI 228
+K D +KL+++G GVGK+ + +F +HF + + TI ++ K + + L I
Sbjct: 5 QKDVDKQYKLVVVGGGGVGKSALTIQFIQSHFVSDYDPTIEDSYR-KQCVIDERVAHLDI 63
Query: 229 WDTAGQERFTPSRRR 273
DTAGQE F+ R +
Sbjct: 64 LDTAGQEEFSAMREQ 78
>SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 49.6 bits (113), Expect = 1e-06
Identities = 24/61 (39%), Positives = 35/61 (57%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 252
KL+++GD GVGK+ L + N F +I T+ D + L GK + +WDTAGQE
Sbjct: 7 KLVVVGDGGVGKSAFLITATTNAFPGEYIPTV-FDNYSSNIMLDGKAYNVGLWDTAGQED 65
Query: 253 F 255
+
Sbjct: 66 Y 66
>SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 48.4 bits (110), Expect = 2e-06
Identities = 20/39 (51%), Positives = 32/39 (82%)
Frame = +3
Query: 288 MGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 404
+GI+LVYDIT E +F I +WL+NI+++A+ +V K++LG
Sbjct: 3 LGILLVYDITTEDSFKHISQWLQNIEDNASPNVCKVLLG 41
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 48.0 bits (109), Expect = 3e-06
Identities = 22/59 (37%), Positives = 31/59 (52%)
Frame = +1
Query: 79 LLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQERF 255
L +GD G GKT + R F +I+T+G++ IK +WDTAGQE+F
Sbjct: 36 LQVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLIFFTSRGPIKFNVWDTAGQEKF 94
Score = 26.6 bits (56), Expect = 8.1
Identities = 11/51 (21%), Positives = 27/51 (52%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 404
F + YY ++++D+T+ T+ ++ W R++ E E++ ++ G
Sbjct: 94 FGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDL-ERVCENIPIVLCG 143
>SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31)
Length = 506
Score = 46.0 bits (104), Expect = 1e-05
Identities = 21/60 (35%), Positives = 37/60 (61%)
Frame = +1
Query: 76 LLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQERF 255
++L+GDS GKT +L + N F + +T+ + VE+ G++I+L +WDT+G E +
Sbjct: 235 VILVGDSECGKTALLNAYVRNQFNEKYEATV-FNSLSTAVEVDGERIELTLWDTSGHEDY 293
>SB_11757| Best HMM Match : Ras (HMM E-Value=0)
Length = 211
Score = 45.6 bits (103), Expect = 2e-05
Identities = 24/65 (36%), Positives = 36/65 (55%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 252
K +++GD GVGKT +L + + F +++ T D TVE+ K ++ DTAGQE
Sbjct: 20 KCVIVGDGGVGKTSLLVSYMMDGFPNSYVPT-AFDTYHVTVEVNKKLCMIEFCDTAGQED 78
Query: 253 FTPSR 267
F R
Sbjct: 79 FDALR 83
>SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 45.6 bits (103), Expect = 2e-05
Identities = 23/61 (37%), Positives = 37/61 (60%)
Frame = +1
Query: 61 DLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTA 240
D K++ +GD VGKT L+ + ++F T FI++I D KT+E+ GK+ + + DT
Sbjct: 7 DPTIKVVFVGDKNVGKTSFLYAATTHNFPTGFIASI-FDGYSKTMEIDGKRYTVLLCDTP 65
Query: 241 G 243
G
Sbjct: 66 G 66
>SB_56255| Best HMM Match : Arf (HMM E-Value=0)
Length = 181
Score = 45.2 bits (102), Expect = 2e-05
Identities = 24/63 (38%), Positives = 35/63 (55%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 252
++L++G GKT IL++ TT I TIG F ++TVE K I +WD GQ++
Sbjct: 19 RILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVETVEY--KNISFTVWDVGGQDK 73
Query: 253 FTP 261
P
Sbjct: 74 IRP 76
>SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21)
Length = 242
Score = 44.0 bits (99), Expect = 5e-05
Identities = 27/72 (37%), Positives = 38/72 (52%)
Frame = +1
Query: 70 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQE 249
F ++ G S VGKT ++ RF F + TI DF IK V + +LQI DT+G
Sbjct: 29 FTIVFFGASSVGKTSLILRFLGYAFNDDYSPTIE-DFFIKHVFFNNETYELQIIDTSGTY 87
Query: 250 RFTPSRRRITAA 285
F P+ R++ A
Sbjct: 88 EF-PAMRKVDIA 98
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 44.0 bits (99), Expect = 5e-05
Identities = 23/66 (34%), Positives = 36/66 (54%)
Frame = +1
Query: 70 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQE 249
+K++++G GVGK+ + +F F + TI DF K +E+ L+I DTAG E
Sbjct: 4 YKVVVLGSGGVGKSALTVQFVTGQFVEKYDPTIE-DFYRKEIEVDNNPSILEILDTAGTE 62
Query: 250 RFTPSR 267
+F R
Sbjct: 63 QFASMR 68
Score = 27.5 bits (58), Expect = 4.6
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDI 341
F ++ Y + G +LVY + N +TF D+
Sbjct: 64 FASMRDLYIKNGQGFLLVYSLINRQTFADL 93
>SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30)
Length = 421
Score = 44.0 bits (99), Expect = 5e-05
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 404
F ++ YYR A +LVYDIT E TF + W+R + + +D+ + G
Sbjct: 22 FKSLAPLYYRDAAAAILVYDITIESTFHSLRPWIRELQRYGPQDIVIAVAG 72
Score = 30.3 bits (65), Expect = 0.66
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +1
Query: 208 KKIKLQIWDTAGQERF 255
K K IWDTAGQERF
Sbjct: 7 KAYKFNIWDTAGQERF 22
>SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10)
Length = 159
Score = 44.0 bits (99), Expect = 5e-05
Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +1
Query: 61 DLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGID-FKIKTVELRGKKIKLQIWDT 237
D +K+ L G GVGKT I R S + F S ID I V + KK+K+ +WDT
Sbjct: 6 DEVYKIALCGKMGVGKTSIYTRLSTDEFPEEEQSLHHIDQCFIPLVCICNKKLKIHLWDT 65
Query: 238 AGQERF 255
G E +
Sbjct: 66 LGMEEY 71
>SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 43.6 bits (98), Expect = 7e-05
Identities = 23/63 (36%), Positives = 35/63 (55%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 252
++L++G GKT IL++ TT I TIG F +++VE K I +WD GQ++
Sbjct: 19 RILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVESVEY--KNISFTVWDVGGQDK 73
Query: 253 FTP 261
P
Sbjct: 74 IRP 76
>SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19)
Length = 351
Score = 42.7 bits (96), Expect = 1e-04
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Frame = +1
Query: 70 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVEL-RGKKIKLQIWDTAGQ 246
F+++++G GVGKT ++ RF F+ + T+G D K+V L + L+I DTAG
Sbjct: 108 FRVVVLGSGGVGKTSLVKRFISGTFSEQYTPTVG-DLYEKSVTLSKDFNAFLEIMDTAGS 166
Query: 247 ERFTPSRRRIT 279
F P+ +++T
Sbjct: 167 YPF-PAMKKLT 176
>SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35)
Length = 263
Score = 41.5 bits (93), Expect = 3e-04
Identities = 21/62 (33%), Positives = 36/62 (58%)
Frame = +1
Query: 61 DLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTA 240
D +++ L+GD GVGKT +L RF + F + TI ++ K++ + + L+I DTA
Sbjct: 3 DHVYRIALLGDEGVGKTALLVRFLCHRFLGEYDPTIEDKYR-KSINIDDVTVTLEILDTA 61
Query: 241 GQ 246
+
Sbjct: 62 SR 63
>SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11)
Length = 220
Score = 41.5 bits (93), Expect = 3e-04
Identities = 13/43 (30%), Positives = 27/43 (62%)
Frame = +3
Query: 276 YRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 404
YR G ++V+D+T+ K+F+ + WL + EH ++ +++G
Sbjct: 43 YRALSGAVIVFDVTDRKSFERVPTWLDKVQEHCGHEIPVVLVG 85
>SB_12680| Best HMM Match : Ras (HMM E-Value=3.4e-05)
Length = 243
Score = 40.7 bits (91), Expect = 5e-04
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Frame = +1
Query: 40 KMAKKTYDLXFKLLLIGD-SGVGKTC-ILFRFSDNHFTTTFIS-TIGIDFKIKTVELR-- 204
K+ + D FK++ +GD +G GK L + N + + TIG+DF + +E R
Sbjct: 41 KLKSRASDHTFKIMCVGDYTGFGKKGGFLSDYIHNRPLSFYQKPTIGVDFYVHFIEWRET 100
Query: 205 GKK----IKLQIWDTAGQERFTPSRRRITAALWASCS 303
KK +KLQ WD A ERF ++TA +CS
Sbjct: 101 DKKKDSTVKLQFWDVAEHERFL----KMTAVYCRNCS 133
>SB_29274| Best HMM Match : Ras (HMM E-Value=2.5e-05)
Length = 152
Score = 39.9 bits (89), Expect = 8e-04
Identities = 18/48 (37%), Positives = 32/48 (66%)
Frame = +3
Query: 261 ITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 404
++T+ R GI+LVYDIT K+FD++ WL +I ++ + E +++G
Sbjct: 48 VSTAQGRKGWGILLVYDITCRKSFDNLQFWLESIRKNKLQYEEILLVG 95
>SB_37042| Best HMM Match : Arf (HMM E-Value=0)
Length = 188
Score = 39.5 bits (88), Expect = 0.001
Identities = 21/63 (33%), Positives = 36/63 (57%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 252
+++++G GKT IL++ +T I TIG F ++T++ K + L IWD GQ++
Sbjct: 21 RIVMLGLDAAGKTTILYKLKLKETVST-IPTIG--FNVETLQPT-KNVTLTIWDVGGQDK 76
Query: 253 FTP 261
P
Sbjct: 77 IRP 79
>SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06)
Length = 965
Score = 39.5 bits (88), Expect = 0.001
Identities = 17/58 (29%), Positives = 35/58 (60%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQ 246
K+++IG+ GVGK+ + RF F + T+ ++ + E+ G+ + +++ DTAG+
Sbjct: 863 KVVIIGEDGVGKSALTVRFLTKRFIGEYDDTLESTYR-QDAEVAGEVVAIELTDTAGE 919
>SB_11310| Best HMM Match : Arf (HMM E-Value=0)
Length = 255
Score = 39.1 bits (87), Expect = 0.001
Identities = 23/60 (38%), Positives = 33/60 (55%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 252
+LL++G GKT IL+ + T I TIG F ++ VE K IK +WD GQ++
Sbjct: 92 RLLMVGLDAAGKTTILYHLKLDEPVNT-IPTIG--FNVEVVEY--KNIKFTVWDIGGQDK 146
>SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07)
Length = 92
Score = 39.1 bits (87), Expect = 0.001
Identities = 18/62 (29%), Positives = 37/62 (59%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 252
K+ ++G VGK+ + +F + F ++ TI F K ++ +G++ L++ DTAGQ+
Sbjct: 8 KIAVMGFRSVGKSSLTIQFVEGQFVDSYDPTIENTFT-KNIKYKGQEFFLELVDTAGQDE 66
Query: 253 FT 258
++
Sbjct: 67 YS 68
>SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 37.9 bits (84), Expect = 0.003
Identities = 13/30 (43%), Positives = 22/30 (73%)
Frame = +3
Query: 273 YYRGAMGIMLVYDITNEKTFDDIVKWLRNI 362
+Y G G++LV+D+TN K+F ++ KWL +
Sbjct: 80 FYNGINGLILVHDLTNRKSFTNLRKWLAEV 109
Score = 36.7 bits (81), Expect = 0.008
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELR-----GKKIKLQIWDT 237
++ ++GDSGVGKT ++ ++ TIG ++K + + GK L+ WD
Sbjct: 8 RIAVVGDSGVGKTSLVHLICHEESISSAAWTIGCTVEVKLYDYKEGMPGGKTFFLEFWDI 67
Query: 238 AGQERFTPSR 267
G SR
Sbjct: 68 GGSANHENSR 77
>SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 37.1 bits (82), Expect = 0.006
Identities = 20/61 (32%), Positives = 31/61 (50%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 252
KL ++GD VGKT + + N F T +I T + + G K + ++D+AG E
Sbjct: 8 KLYIVGDGAVGKTALFITAATNTFPTEYIPTAYDASEQDFFNVDGIKYQAVLFDSAGGED 67
Query: 253 F 255
F
Sbjct: 68 F 68
>SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35)
Length = 2748
Score = 36.7 bits (81), Expect = 0.008
Identities = 21/66 (31%), Positives = 33/66 (50%)
Frame = +1
Query: 70 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQE 249
F+L ++G GVGK+ + R+ N FT ++ GK +++ DTAGQE
Sbjct: 2599 FRLCVVGSGGVGKSSVTIRYLKNEFT--------------EIDYCGKLYDIEVVDTAGQE 2644
Query: 250 RFTPSR 267
+T R
Sbjct: 2645 EYTSFR 2650
>SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15)
Length = 857
Score = 35.9 bits (79), Expect = 0.013
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +3
Query: 273 YYRGAMGIMLVYDITNEKTFDDIVKWLRNID 365
YY+ A+G +V+D+T TF + KW ++D
Sbjct: 710 YYKEAVGAFIVFDVTRASTFSAVQKWKNDLD 740
Score = 34.7 bits (76), Expect = 0.030
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +1
Query: 70 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGID 177
FK+L+IGD GVGKT ++ R+ F+ + +T+ +
Sbjct: 672 FKVLVIGDLGVGKTSLIKRYVHQFFSVHYRATVSFN 707
>SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31)
Length = 357
Score = 35.5 bits (78), Expect = 0.017
Identities = 19/61 (31%), Positives = 32/61 (52%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 252
K++L GD+ VGKT L + N T T ++++ +E+ +K L +WDT G
Sbjct: 8 KVVLTGDNNVGKTSFLINLTQNELEGT--PTAFANYEL-GLEVGSQKFLLDLWDTEGTTE 64
Query: 253 F 255
+
Sbjct: 65 Y 65
Score = 28.3 bits (60), Expect = 2.6
Identities = 13/27 (48%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +3
Query: 276 YRGAMGIMLVYDITNEKTFDDI-VKWL 353
Y+G+ I+L +DI+N +TF+ I KWL
Sbjct: 73 YQGSDIILLCFDISNRQTFERIESKWL 99
>SB_53421| Best HMM Match : Arf (HMM E-Value=0)
Length = 625
Score = 35.1 bits (77), Expect = 0.023
Identities = 20/57 (35%), Positives = 30/57 (52%)
Frame = +1
Query: 82 LIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 252
+IG GKT IL+R +T + T+G F ++TV K I +WD GQ++
Sbjct: 1 MIGLDNAGKTTILYRLKLEEVVST-VPTLG--FNVETVTY--KNISFTVWDIGGQDK 52
>SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1325
Score = 35.1 bits (77), Expect = 0.023
Identities = 23/76 (30%), Positives = 35/76 (46%)
Frame = +1
Query: 34 ICKMAKKTYDLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKK 213
+ + K D ++LL+G GKT IL + T G F IK+V+ +G
Sbjct: 6 LLRKLKSEKDREMRILLLGLDNSGKTTILKSLASED-VLHITPTQG--FNIKSVQSKG-G 61
Query: 214 IKLQIWDTAGQERFTP 261
+L +WD GQ + P
Sbjct: 62 FRLNVWDIGGQRKIRP 77
>SB_18358| Best HMM Match : Arf (HMM E-Value=0)
Length = 214
Score = 34.3 bits (75), Expect = 0.040
Identities = 19/64 (29%), Positives = 34/64 (53%)
Frame = +1
Query: 70 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQE 249
F ++++G GKT IL+R + T +T F ++T+ K I+ ++WD G+E
Sbjct: 22 FHVVMLGLDKSGKTSILYRNKFREYVNTVPTTA---FNVETIR-PFKGIRFKVWDIGGRE 77
Query: 250 RFTP 261
+ P
Sbjct: 78 QNRP 81
>SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 33.9 bits (74), Expect = 0.053
Identities = 16/56 (28%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFR--FSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWD 234
+++++GDS VGKTC+L + + N + + +I ++ + + + GK KL++ D
Sbjct: 20 RIVILGDSTVGKTCLLLQLCYKSNTMSRKHLESISNNY-VANIIVDGKVYKLELCD 74
>SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19)
Length = 811
Score = 33.5 bits (73), Expect = 0.070
Identities = 17/72 (23%), Positives = 35/72 (48%)
Frame = +1
Query: 40 KMAKKTYDLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIK 219
K ++ + KL+L+G+SG GKT + ++ + I+ ++ ++
Sbjct: 251 KKSRPVHSKRIKLVLLGESGAGKTSCAHGLVECEAINQTLNDGTVGVVIRNWQVEPDGLE 310
Query: 220 LQIWDTAGQERF 255
+Q+ D AGQ R+
Sbjct: 311 VQVVDCAGQRRY 322
>SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 33.1 bits (72), Expect = 0.093
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +1
Query: 70 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTA 240
+ L+L+G +GVGK+ +L RF F + T+ + + + + + L I DTA
Sbjct: 128 YSLVLLGQAGVGKSALLVRFCTGRFIHEYDPTLEMTYDV-SATIDEDPATLHITDTA 183
>SB_52502| Best HMM Match : GTP_CDC (HMM E-Value=1.9e-06)
Length = 101
Score = 32.7 bits (71), Expect = 0.12
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Frame = +1
Query: 40 KMAKKTYDLXFKLLLIGDSGVGKTCI---LF---RFSDNHFTTT---FISTIGIDFKIKT 192
K KK ++ F L+++G+SG+GK+ + LF +SD + T+ I+
Sbjct: 17 KSVKKGFE--FTLMVVGESGLGKSTLIDSLFLTDLYSDRKILSAEERIKKTVKIETSTVE 74
Query: 193 VELRGKKIKLQIWDTAG 243
+E RG K++L + DT G
Sbjct: 75 IEERGVKLRLTVVDTPG 91
>SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36)
Length = 260
Score = 32.7 bits (71), Expect = 0.12
Identities = 19/61 (31%), Positives = 32/61 (52%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 252
+L L+G GKT + + F+ I T+G F ++ V +G + +++WD GQ R
Sbjct: 22 ELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVG--FNMRKVS-KG-NVTIKVWDIGGQPR 77
Query: 253 F 255
F
Sbjct: 78 F 78
>SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 32.7 bits (71), Expect = 0.12
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +3
Query: 261 ITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNI 362
+ +Y+ G +LVYD+T+ ++F+ + WL I
Sbjct: 6 VRNEFYKDTQGALLVYDVTSRESFEALDIWLDEI 39
>SB_54000| Best HMM Match : MMR_HSR1 (HMM E-Value=1.8)
Length = 65
Score = 32.7 bits (71), Expect = 0.12
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 49 KKTYDLXFKLLLIGDSGVGKTCILFRF 129
+K D K+LLIGDS VGKT +L F
Sbjct: 6 RKKQDYLLKVLLIGDSNVGKTKLLLTF 32
>SB_31439| Best HMM Match : Ras (HMM E-Value=4.7)
Length = 55
Score = 32.7 bits (71), Expect = 0.12
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +3
Query: 261 ITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNI 362
+ +Y+ G +LVYD+T+ ++F+ + WL I
Sbjct: 1 VRNEFYKDTQGALLVYDVTSRESFEALDIWLDEI 34
>SB_53179| Best HMM Match : BTB (HMM E-Value=3.3e-21)
Length = 604
Score = 32.3 bits (70), Expect = 0.16
Identities = 12/19 (63%), Positives = 17/19 (89%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRF 129
KL ++GD+ VGKTCIL+R+
Sbjct: 10 KLKVVGDTNVGKTCILYRW 28
>SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13)
Length = 322
Score = 32.3 bits (70), Expect = 0.16
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +1
Query: 64 LXFKLLLIGDSGVGKTCI--LFRFSDNHFTTTFISTIGIDFKIKTVEL 201
L K+L+ GDS VGK+ + +F+ H+ + T+G + +K V +
Sbjct: 4 LRAKVLVTGDSCVGKSALVQVFQSDGTHYPKNYTQTVGAEVLVKLVNI 51
Score = 28.3 bits (60), Expect = 2.6
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +3
Query: 294 IMLVYDITNEKTFDDIVKWLRNIDEHANED 383
+++ YD++NE++F+ KWL A D
Sbjct: 65 VIVAYDVSNEQSFNACNKWLERCRSLAKSD 94
>SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2229
Score = 32.3 bits (70), Expect = 0.16
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFS-DN-HFTTTFISTIGI-DFKIKTVELRGKKIKLQIWDTAG 243
KL+L+G GKT ++ R DN +F + + I + +F++K + ++ +IWD G
Sbjct: 553 KLMLVGREAQGKTTLMHRLMLDNTYFINSATNGISMEEFRLKK-DFLHREFIFKIWDFGG 611
Query: 244 QERF 255
QE +
Sbjct: 612 QEDY 615
>SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 31.1 bits (67), Expect = 0.38
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +1
Query: 61 DLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIG 171
++ FK+L++GD+ VGKT + R+ + + TIG
Sbjct: 20 EILFKVLIVGDATVGKTSFVQRYVHGNTRREYKPTIG 56
>SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7)
Length = 368
Score = 30.7 bits (66), Expect = 0.50
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +1
Query: 70 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIG 171
+ ++++G +GVGKT ++ RF F + T+G
Sbjct: 325 YSMVVLGAAGVGKTALVVRFVTGRFLNEYDPTLG 358
>SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35)
Length = 145
Score = 30.7 bits (66), Expect = 0.50
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKW 350
F ++ ++YRGA +LV+D+T +F + W
Sbjct: 10 FQSLGVAFYRGADCCVLVFDVTQPNSFKTLDSW 42
Score = 27.1 bits (57), Expect = 6.1
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 226 IWDTAGQERF 255
IWDTAGQERF
Sbjct: 1 IWDTAGQERF 10
>SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 30.7 bits (66), Expect = 0.50
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 205 GKKIKLQIWDTAGQERF 255
G+ I+L +WDTAGQE F
Sbjct: 31 GEDIRLMLWDTAGQEEF 47
>SB_36446| Best HMM Match : GTP_CDC (HMM E-Value=0)
Length = 384
Score = 29.9 bits (64), Expect = 0.87
Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 9/82 (10%)
Frame = +1
Query: 25 NE*ICKMAKKTYDLXFKLLLIGDSGVGKTCIL-FRFSDNHFTTTFISTI------GIDFK 183
N+ K KK ++ F ++++G+SG+GK+ +L F + +T + +I ++ K
Sbjct: 12 NQVFRKSVKKGFE--FTVMVVGESGLGKSTLLNSLFLTDLYTPSSYPSIKEKLNKTVEVK 69
Query: 184 IKTVELR--GKKIKLQIWDTAG 243
TVEL+ G +++L + DT G
Sbjct: 70 PCTVELKEGGVRLRLTVVDTPG 91
>SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96)
Length = 244
Score = 29.9 bits (64), Expect = 0.87
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +1
Query: 70 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDT 237
FK+ ++G S VGKT ++ FT I TI D+ I + G + + DT
Sbjct: 188 FKMAILGGSAVGKTSLMRALFKKPFTNEHIPTID-DYIIHALNQDGVHYNVCLVDT 242
>SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 29.5 bits (63), Expect = 1.1
Identities = 10/26 (38%), Positives = 20/26 (76%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTT 150
KL+L+GD+G+GK+ ++ + + H T+
Sbjct: 7 KLVLVGDAGIGKSTLIAKCHETHPTS 32
>SB_18788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 820
Score = 29.1 bits (62), Expect = 1.5
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -3
Query: 251 RSCPAVSHIWSFIFLPLNSTVFILKSIPIVEIKVVV 144
R A+ H S I+LP +S FI+ I IV I +V+
Sbjct: 758 RPATAMLHDESIIYLPSSSPYFIITMIIIVSIVIVI 793
>SB_59377| Best HMM Match : Exo_endo_phos (HMM E-Value=1.7)
Length = 839
Score = 28.3 bits (60), Expect = 2.6
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -3
Query: 272 RRRDGVKRSCPAVSHIW 222
+RR ++R CPA+ H+W
Sbjct: 258 KRRTDIERRCPAMEHLW 274
>SB_33594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 566
Score = 28.3 bits (60), Expect = 2.6
Identities = 18/78 (23%), Positives = 34/78 (43%)
Frame = -3
Query: 290 HSAAVIRRRDGVKRSCPAVSHIWSFIFLPLNSTVFILKSIPIVEIKVVVKWLSENLNNMH 111
H A + R G+ A+ + + +L + + IP KV + L E ++ +
Sbjct: 21 HCLATLARVSGIYLVLSAILYTYLRCYLNVPDRKSFIDPIPSALQKVSLASLQEKIDRTY 80
Query: 110 VFPTPESPMRSSLNXKSY 57
V TPE + ++ KS+
Sbjct: 81 VDHTPELVAQGGVSIKSF 98
>SB_15761| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 319
Score = 28.3 bits (60), Expect = 2.6
Identities = 15/62 (24%), Positives = 26/62 (41%)
Frame = -3
Query: 299 HDAHSAAVIRRRDGVKRSCPAVSHIWSFIFLPLNSTVFILKSIPIVEIKVVVKWLSENLN 120
H H R G + CP SH+ +L + I++ + +V ++ VV + L
Sbjct: 183 HPKHDITESAREAGSRNRCPCSSHM-GLPWLDHTALALIIRVLVLVSLRFVVNNFGQGLR 241
Query: 119 NM 114
M
Sbjct: 242 EM 243
>SB_11841| Best HMM Match : Ras (HMM E-Value=0)
Length = 523
Score = 27.9 bits (59), Expect = 3.5
Identities = 12/50 (24%), Positives = 24/50 (48%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMIL 401
+ + Y R G + V+ + N K+F+DI ++ I + + M+L
Sbjct: 290 YSAMRDQYMRTGEGFLCVFAVNNSKSFEDINQYREQIKRVKDAEEVPMVL 339
>SB_57110| Best HMM Match : 7tm_1 (HMM E-Value=4.9e-22)
Length = 559
Score = 27.9 bits (59), Expect = 3.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 273 YYRGAMGIMLVYDITNEKTFDDI 341
Y + G +LVY IT + TF+D+
Sbjct: 5 YMKNGQGFVLVYSITAQSTFNDL 27
>SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31)
Length = 650
Score = 27.9 bits (59), Expect = 3.5
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 178 FKIKTVELRGKKIKLQIWDTAGQERFTP 261
F ++TVE K I +WD GQ++ P
Sbjct: 500 FNVETVEY--KNISFTVWDVGGQDKIRP 525
>SB_45581| Best HMM Match : Ras (HMM E-Value=0.069)
Length = 284
Score = 27.9 bits (59), Expect = 3.5
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIG-IDFKIKTV 195
+++++G GVGK+ + R F + ST+G + F I T+
Sbjct: 18 RVVVLGQDGVGKSALTVRLLTKRFIGEYDSTLGEMGFYINTM 59
>SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 384
Score = 27.5 bits (58), Expect = 4.6
Identities = 9/21 (42%), Positives = 18/21 (85%)
Frame = +1
Query: 70 FKLLLIGDSGVGKTCILFRFS 132
+K++L+GD+GVGK+ ++ R +
Sbjct: 14 YKVVLVGDAGVGKSFVIDRLN 34
>SB_44879| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 352
Score = 27.5 bits (58), Expect = 4.6
Identities = 11/37 (29%), Positives = 23/37 (62%)
Frame = -3
Query: 230 HIWSFIFLPLNSTVFILKSIPIVEIKVVVKWLSENLN 120
+IW F+ +PL+ ++F S+ +V + VV ++L+
Sbjct: 88 YIWPFMSVPLSVSIFTTSSMAVVRSRSVVYAWKQSLS 124
>SB_1071| Best HMM Match : Ras (HMM E-Value=0)
Length = 228
Score = 27.5 bits (58), Expect = 4.6
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDI 341
F ++ Y + G +LVY + N +TF D+
Sbjct: 48 FASMRDLYIKNGQGFLLVYSLINRQTFADL 77
>SB_45261| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 26.6 bits (56), Expect = 8.1
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = -2
Query: 258 CETLLPSSVPYLEL 217
C+T+LPSSVP++ L
Sbjct: 78 CQTVLPSSVPFIRL 91
>SB_13497| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 434
Score = 26.6 bits (56), Expect = 8.1
Identities = 13/54 (24%), Positives = 29/54 (53%)
Frame = -3
Query: 215 IFLPLNSTVFILKSIPIVEIKVVVKWLSENLNNMHVFPTPESPMRSSLNXKSYV 54
+F ++ V + S+ IV V+ + EN+ + + TP+S ++ + ++YV
Sbjct: 40 VFSVIHKLVDDVNSVKIVTGDVIHDFAGENVKYLELRSTPKSNPKTGMTKQAYV 93
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,564,082
Number of Sequences: 59808
Number of extensions: 283079
Number of successful extensions: 1008
Number of sequences better than 10.0: 94
Number of HSP's better than 10.0 without gapping: 858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 995
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 764823134
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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