Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0131
         (415 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            60   4e-11
AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    47   2e-07
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    26   0.62 
AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    23   3.3  
DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.       22   7.7  

>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 59.7 bits (138), Expect = 4e-11
 Identities = 28/62 (45%), Positives = 40/62 (64%)
 Frame = +1

Query: 70  FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQE 249
           FKL+L+G+S VGK+ ++ RF    F     STIG  F  +T+ +    +K +IWDTAGQE
Sbjct: 25  FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFEIWDTAGQE 84

Query: 250 RF 255
           R+
Sbjct: 85  RY 86



 Score = 40.7 bits (91), Expect = 2e-05
 Identities = 15/51 (29%), Positives = 28/51 (54%)
 Frame = +3

Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 404
           +H++   YYRGA   ++VYDI N  +F     W++ +   A+ ++   + G
Sbjct: 86  YHSLAPMYYRGAQAAIVVYDIQNSDSFARAKTWVKELQRQASPNIVIALAG 136


>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 47.2 bits (107), Expect = 2e-07
 Identities = 21/61 (34%), Positives = 37/61 (60%)
 Frame = +1

Query: 73  KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 252
           K +++GD  VGKTC+L  ++ + F   ++ T   ++    V + G ++ L +WDTAGQE 
Sbjct: 8   KCVVVGDGTVGKTCMLISYTTDSFPGEYVPTSFDNYSAPMV-VDGVQVSLGLWDTAGQED 66

Query: 253 F 255
           +
Sbjct: 67  Y 67


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 25.8 bits (54), Expect = 0.62
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 225  DMGHCWAGAFHTITTSYY 278
            ++G+CW    HT+   YY
Sbjct: 1678 ELGNCWHVVLHTVKPDYY 1695


>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 695

 Score = 23.4 bits (48), Expect = 3.3
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = -2

Query: 111 RFSNSGVTDEKQFEXQVVCFFGHF 40
           +FS + +T+E+Q + Q   F+ +F
Sbjct: 637 KFSTASITEEQQQQQQQPLFYSNF 660


>DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.
          Length = 410

 Score = 22.2 bits (45), Expect = 7.7
 Identities = 8/24 (33%), Positives = 17/24 (70%)
 Frame = -3

Query: 242 PAVSHIWSFIFLPLNSTVFILKSI 171
           P   ++  +IF+P+NST  +++S+
Sbjct: 176 PYRQNVTMYIFMPMNSTRQLVQSM 199


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 458,118
Number of Sequences: 2352
Number of extensions: 8976
Number of successful extensions: 23
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 33777477
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)