Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0131
(415 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 132 7e-32
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 132 7e-32
U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein. 126 8e-30
AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family pr... 126 8e-30
AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein. 126 8e-30
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 111 1e-25
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 103 4e-23
U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein. 103 5e-23
U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein. 98 2e-21
U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein. 98 2e-21
U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family pro... 98 2e-21
U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family pro... 98 2e-21
AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein. 98 2e-21
U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein. 91 2e-19
AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical ... 86 8e-18
U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical pr... 86 1e-17
AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family pr... 84 3e-17
Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical pr... 83 6e-17
U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like prot... 83 6e-17
AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical ... 83 6e-17
AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical ... 83 1e-16
AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family pr... 83 1e-16
AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein. 83 1e-16
AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein. 83 1e-16
U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated p... 81 2e-16
U68260-1|AAB16975.1| 69|Caenorhabditis elegans rab19-like prot... 80 7e-16
AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical ... 80 7e-16
U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein. 77 4e-15
AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical ... 77 5e-15
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 77 7e-15
Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical pr... 75 2e-14
U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like prot... 75 2e-14
Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical pr... 75 3e-14
U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family prot... 74 4e-14
Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical pr... 72 1e-13
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 72 1e-13
U68262-1|AAB16977.1| 74|Caenorhabditis elegans RAM1-like protein. 71 3e-13
Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical pr... 69 1e-12
Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical pr... 69 2e-12
Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical pr... 68 2e-12
Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical pr... 66 9e-12
Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical p... 66 1e-11
DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GL... 66 1e-11
Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical pr... 62 2e-10
Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical pr... 62 2e-10
U68254-1|AAB16969.1| 67|Caenorhabditis elegans rab6-like protein. 61 3e-10
L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleot... 60 5e-10
AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical ... 60 5e-10
U68253-1|AAB16968.1| 65|Caenorhabditis elegans rab6-like protein. 59 1e-09
Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical pr... 56 8e-09
AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death a... 56 1e-08
AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family pr... 56 1e-08
Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical pr... 54 4e-08
X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-relat... 54 4e-08
U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein. 54 4e-08
L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein pr... 54 4e-08
L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein pr... 54 4e-08
AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse e... 54 4e-08
AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death a... 54 4e-08
Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical pr... 52 2e-07
M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein pro... 52 2e-07
U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical pr... 52 2e-07
U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical p... 52 2e-07
L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleot... 52 2e-07
Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical pr... 51 4e-07
U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase... 51 4e-07
S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog p... 50 7e-07
U68261-1|AAB16976.1| 53|Caenorhabditis elegans rab19-like prot... 49 1e-06
Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical pr... 49 2e-06
Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical pr... 49 2e-06
U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding pro... 49 2e-06
Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical p... 48 2e-06
AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical ... 48 4e-06
Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical pr... 47 6e-06
Z71180-2|CAA94890.1| 207|Caenorhabditis elegans Hypothetical pr... 46 1e-05
Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical p... 45 2e-05
U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylati... 45 2e-05
AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylat... 45 2e-05
AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylat... 45 2e-05
U68263-1|AAB16978.1| 115|Caenorhabditis elegans rab-like protein. 44 3e-05
AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical ... 44 6e-05
U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylatio... 42 1e-04
AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-rela... 42 1e-04
U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding pro... 41 3e-04
U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog ... 41 3e-04
CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical ... 41 3e-04
CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical ... 41 3e-04
U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein. 41 4e-04
AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical ... 40 0.001
Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical pr... 38 0.003
Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical pr... 36 0.012
U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific ... 36 0.015
AL117204-37|CAB55148.2| 248|Caenorhabditis elegans Hypothetical... 35 0.020
Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical pr... 35 0.027
U68255-1|AAB16970.1| 70|Caenorhabditis elegans rab7-like protein. 35 0.027
AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G... 35 0.027
Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical p... 33 0.082
U23938-1|AAA65452.1| 35|Caenorhabditis elegans pra-1 protein. 33 0.11
Z66561-1|CAA91454.1| 635|Caenorhabditis elegans Hypothetical pr... 31 0.25
Z49912-5|CAA90136.1| 312|Caenorhabditis elegans Hypothetical pr... 31 0.25
AL032647-3|CAA21690.1| 316|Caenorhabditis elegans Hypothetical ... 31 0.25
Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical pr... 31 0.44
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 28 2.3
U23168-5|ABD63247.1| 2702|Caenorhabditis elegans Temporarily ass... 28 3.1
U23168-2|AAC38806.2| 1633|Caenorhabditis elegans Temporarily ass... 28 3.1
U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily ass... 28 3.1
AC006659-2|AAF39883.2| 977|Caenorhabditis elegans Hypothetical ... 27 4.1
AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical ... 27 5.4
Z78198-6|CAB01572.2| 848|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z49912-9|CAA90141.2| 1067|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z49912-8|CAE54898.1| 1067|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z49907-13|CAA90091.2| 1067|Caenorhabditis elegans Hypothetical p... 27 7.1
Z49907-12|CAE54883.1| 1067|Caenorhabditis elegans Hypothetical p... 27 7.1
Z37093-6|CAJ85783.1| 176|Caenorhabditis elegans Hypothetical pr... 26 9.4
Z37093-5|CAJ85782.1| 212|Caenorhabditis elegans Hypothetical pr... 26 9.4
AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical ... 26 9.4
AC087079-5|ABC48240.1| 367|Caenorhabditis elegans Hypothetical ... 26 9.4
AC087079-4|ABC48239.1| 370|Caenorhabditis elegans Hypothetical ... 26 9.4
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family protein
10 protein.
Length = 201
Score = 132 bits (320), Expect = 7e-32
Identities = 60/71 (84%), Positives = 67/71 (94%)
Frame = +1
Query: 43 MAKKTYDLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKL 222
MA++ YD+ FKLLLIGDSGVGKTCIL+RFSD+ F TTFISTIGIDFKIKT+EL+GKKIKL
Sbjct: 1 MARRPYDMLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKL 60
Query: 223 QIWDTAGQERF 255
QIWDTAGQERF
Sbjct: 61 QIWDTAGQERF 71
Score = 100 bits (240), Expect = 4e-22
Identities = 45/51 (88%), Positives = 48/51 (94%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 404
FHTITTSYYRGAMGIMLVYDITN K+FD+I KWLRNIDEHA+EDV KMILG
Sbjct: 71 FHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVVKMILG 121
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 132 bits (320), Expect = 7e-32
Identities = 60/71 (84%), Positives = 67/71 (94%)
Frame = +1
Query: 43 MAKKTYDLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKL 222
MA++ YD+ FKLLLIGDSGVGKTCIL+RFSD+ F TTFISTIGIDFKIKT+EL+GKKIKL
Sbjct: 1 MARRPYDMLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKL 60
Query: 223 QIWDTAGQERF 255
QIWDTAGQERF
Sbjct: 61 QIWDTAGQERF 71
Score = 100 bits (240), Expect = 4e-22
Identities = 45/51 (88%), Positives = 48/51 (94%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 404
FHTITTSYYRGAMGIMLVYDITN K+FD+I KWLRNIDEHA+EDV KMILG
Sbjct: 71 FHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVVKMILG 121
>U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein.
Length = 123
Score = 126 bits (303), Expect = 8e-30
Identities = 61/80 (76%), Positives = 67/80 (83%)
Frame = +1
Query: 52 KTYDLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIW 231
KTYD FKLLLIGDSGVGKTC+LFRFSD+ F +FISTIGIDFKI+T+EL GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 232 DTAGQERFTPSRRRITAALW 291
DTAGQERF R IT A +
Sbjct: 63 DTAGQERF----RTITTAYY 78
Score = 86.6 bits (205), Expect = 6e-18
Identities = 36/51 (70%), Positives = 46/51 (90%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 404
F TITT+YYRGAMGI+LVYDITNE++F++I W+RNI+EHA DVE+MI+G
Sbjct: 70 FRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIG 120
>AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family
protein 8 protein.
Length = 211
Score = 126 bits (303), Expect = 8e-30
Identities = 61/80 (76%), Positives = 67/80 (83%)
Frame = +1
Query: 52 KTYDLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIW 231
KTYD FKLLLIGDSGVGKTC+LFRFSD+ F +FISTIGIDFKI+T+EL GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 232 DTAGQERFTPSRRRITAALW 291
DTAGQERF R IT A +
Sbjct: 63 DTAGQERF----RTITTAYY 78
Score = 86.6 bits (205), Expect = 6e-18
Identities = 36/51 (70%), Positives = 46/51 (90%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 404
F TITT+YYRGAMGI+LVYDITNE++F++I W+RNI+EHA DVE+MI+G
Sbjct: 70 FRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIG 120
>AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein.
Length = 211
Score = 126 bits (303), Expect = 8e-30
Identities = 61/80 (76%), Positives = 67/80 (83%)
Frame = +1
Query: 52 KTYDLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIW 231
KTYD FKLLLIGDSGVGKTC+LFRFSD+ F +FISTIGIDFKI+T+EL GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 232 DTAGQERFTPSRRRITAALW 291
DTAGQERF R IT A +
Sbjct: 63 DTAGQERF----RTITTAYY 78
Score = 86.6 bits (205), Expect = 6e-18
Identities = 36/51 (70%), Positives = 46/51 (90%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 404
F TITT+YYRGAMGI+LVYDITNE++F++I W+RNI+EHA DVE+MI+G
Sbjct: 70 FRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIG 120
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 111 bits (268), Expect = 1e-25
Identities = 49/66 (74%), Positives = 59/66 (89%)
Frame = +1
Query: 58 YDLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDT 237
YD FKLLLIGDSGVGK+C+L RF+D+ +T ++ISTIG+DFKI+T+EL GK IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 238 AGQERF 255
AGQERF
Sbjct: 68 AGQERF 73
Score = 70.1 bits (164), Expect = 6e-13
Identities = 28/51 (54%), Positives = 44/51 (86%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 404
F TIT+SYYRGA GI++VYDIT+++TF+++ +WL+ ID +A E+V K+++G
Sbjct: 73 FRTITSSYYRGAHGIIVVYDITDQETFNNVKQWLQEIDRYACENVNKLLVG 123
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 103 bits (248), Expect = 4e-23
Identities = 43/68 (63%), Positives = 59/68 (86%)
Frame = +1
Query: 52 KTYDLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIW 231
+ YD FKLL+IGDSGVGK+ +L RF+DN F+ +I+TIG+DFKI+T+++ G+++KLQIW
Sbjct: 5 RDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVDFKIRTMDINGQRVKLQIW 64
Query: 232 DTAGQERF 255
DTAGQERF
Sbjct: 65 DTAGQERF 72
Score = 56.8 bits (131), Expect = 6e-09
Identities = 21/51 (41%), Positives = 40/51 (78%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 404
F TIT++YYRG G+++VYD+TN ++F ++ +WL+ I+ + + V+K+++G
Sbjct: 72 FRTITSTYYRGTHGVVVVYDVTNGESFGNVKRWLQEIENNC-DSVQKVLVG 121
>U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein.
Length = 69
Score = 103 bits (247), Expect = 5e-23
Identities = 45/62 (72%), Positives = 55/62 (88%)
Frame = +1
Query: 58 YDLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDT 237
YD FKLLLIGDSGVGK+C+L RF+D+ +T ++ISTIG+DFKI+T+EL GK IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 238 AG 243
AG
Sbjct: 68 AG 69
>U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 98.3 bits (234), Expect = 2e-21
Identities = 46/80 (57%), Positives = 60/80 (75%)
Frame = +1
Query: 52 KTYDLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIW 231
+ +D FKLL+IG+S VGKT LFR+ D+ FT+ F+ST+GIDFK+KTV K++KLQIW
Sbjct: 17 QNFDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIW 76
Query: 232 DTAGQERFTPSRRRITAALW 291
DTAGQER+ R IT A +
Sbjct: 77 DTAGQERY----RTITTAYY 92
Score = 59.3 bits (137), Expect = 1e-09
Identities = 23/51 (45%), Positives = 38/51 (74%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 404
+ TITT+YYRGAMG +L+YDITNE++F+ + W I ++ E+ + +++G
Sbjct: 84 YRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVG 134
>U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 98.3 bits (234), Expect = 2e-21
Identities = 46/80 (57%), Positives = 60/80 (75%)
Frame = +1
Query: 52 KTYDLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIW 231
+ +D FKLL+IG+S VGKT LFR+ D+ FT+ F+ST+GIDFK+KTV K++KLQIW
Sbjct: 17 QNFDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIW 76
Query: 232 DTAGQERFTPSRRRITAALW 291
DTAGQER+ R IT A +
Sbjct: 77 DTAGQERY----RTITTAYY 92
Score = 59.3 bits (137), Expect = 1e-09
Identities = 23/51 (45%), Positives = 38/51 (74%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 404
+ TITT+YYRGAMG +L+YDITNE++F+ + W I ++ E+ + +++G
Sbjct: 84 YRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVG 134
>U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family
protein 3, isoform b protein.
Length = 219
Score = 98.3 bits (234), Expect = 2e-21
Identities = 46/80 (57%), Positives = 60/80 (75%)
Frame = +1
Query: 52 KTYDLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIW 231
+ +D FKLL+IG+S VGKT LFR+ D+ FT+ F+ST+GIDFK+KTV K++KLQIW
Sbjct: 17 QNFDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIW 76
Query: 232 DTAGQERFTPSRRRITAALW 291
DTAGQER+ R IT A +
Sbjct: 77 DTAGQERY----RTITTAYY 92
Score = 59.3 bits (137), Expect = 1e-09
Identities = 23/51 (45%), Positives = 38/51 (74%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 404
+ TITT+YYRGAMG +L+YDITNE++F+ + W I ++ E+ + +++G
Sbjct: 84 YRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVG 134
>U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family
protein 3, isoform a protein.
Length = 233
Score = 98.3 bits (234), Expect = 2e-21
Identities = 46/80 (57%), Positives = 60/80 (75%)
Frame = +1
Query: 52 KTYDLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIW 231
+ +D FKLL+IG+S VGKT LFR+ D+ FT+ F+ST+GIDFK+KTV K++KLQIW
Sbjct: 31 QNFDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIW 90
Query: 232 DTAGQERFTPSRRRITAALW 291
DTAGQER+ R IT A +
Sbjct: 91 DTAGQERY----RTITTAYY 106
Score = 59.3 bits (137), Expect = 1e-09
Identities = 23/51 (45%), Positives = 38/51 (74%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 404
+ TITT+YYRGAMG +L+YDITNE++F+ + W I ++ E+ + +++G
Sbjct: 98 YRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVG 148
>AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein.
Length = 219
Score = 98.3 bits (234), Expect = 2e-21
Identities = 46/80 (57%), Positives = 60/80 (75%)
Frame = +1
Query: 52 KTYDLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIW 231
+ +D FKLL+IG+S VGKT LFR+ D+ FT+ F+ST+GIDFK+KTV K++KLQIW
Sbjct: 17 QNFDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIW 76
Query: 232 DTAGQERFTPSRRRITAALW 291
DTAGQER+ R IT A +
Sbjct: 77 DTAGQERY----RTITTAYY 92
Score = 59.3 bits (137), Expect = 1e-09
Identities = 23/51 (45%), Positives = 38/51 (74%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 404
+ TITT+YYRGAMG +L+YDITNE++F+ + W I ++ E+ + +++G
Sbjct: 84 YRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVG 134
>U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein.
Length = 66
Score = 91.5 bits (217), Expect = 2e-19
Identities = 37/62 (59%), Positives = 53/62 (85%)
Frame = +1
Query: 52 KTYDLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIW 231
+ YD FKLL+IGDSGVGK+ +L RF+DN F+ +I+TIG+DFKI+T+++ G+++KLQIW
Sbjct: 5 RDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVDFKIRTMDINGQRVKLQIW 64
Query: 232 DT 237
DT
Sbjct: 65 DT 66
>AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical
protein Y62E10A.9 protein.
Length = 210
Score = 86.2 bits (204), Expect = 8e-18
Identities = 40/82 (48%), Positives = 57/82 (69%)
Frame = +1
Query: 58 YDLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDT 237
+D FK++L+GD GVGKTC++ RF + F +TIG+DF +KT+ + GK++KLQIWDT
Sbjct: 7 FDYLFKIVLVGDMGVGKTCVVQRFRNGTFVDRQGTTIGVDFTMKTLVVDGKRVKLQIWDT 66
Query: 238 AGQERFTPSRRRITAALWASCS 303
GQERF R IT + + S +
Sbjct: 67 GGQERF----RTITQSYYRSAN 84
Score = 53.6 bits (123), Expect = 5e-08
Identities = 22/51 (43%), Positives = 36/51 (70%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 404
F TIT SYYR A GI+L YDIT +++F + +W+ ++ + A +V K+++G
Sbjct: 72 FRTITQSYYRSANGIVLCYDITCKQSFGSLQRWIDDVSKFAAPNVVKLLIG 122
>U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical
protein K02E10.1 protein.
Length = 218
Score = 85.8 bits (203), Expect = 1e-17
Identities = 34/67 (50%), Positives = 52/67 (77%)
Frame = +1
Query: 55 TYDLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWD 234
+Y+ FK++++GD GK+CIL RF++N F IST+G+DFK+KT++L KI+L++WD
Sbjct: 2 SYNHLFKIVVVGDHNCGKSCILLRFAENSFRMDHISTLGVDFKLKTIKLGRDKIRLELWD 61
Query: 235 TAGQERF 255
TAG ER+
Sbjct: 62 TAGMERY 68
Score = 55.6 bits (128), Expect = 1e-08
Identities = 24/52 (46%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVK-WLRNIDEHANEDVEKMILG 404
+ TI SYY A G+M VYD+TNEK+F+++ K WL+ I +HA + M++G
Sbjct: 68 YRTIYNSYYHSAHGVMCVYDMTNEKSFENLEKYWLKEIKQHAPPNAVLMLVG 119
>AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family
protein 11.1 protein.
Length = 211
Score = 84.2 bits (199), Expect = 3e-17
Identities = 40/78 (51%), Positives = 55/78 (70%)
Frame = +1
Query: 58 YDLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDT 237
YD FK++LIGDSGVGK+ +L RF+ N F STIG++F +++ + GK +K QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQIWDT 67
Query: 238 AGQERFTPSRRRITAALW 291
AGQER+ R IT+A +
Sbjct: 68 AGQERY----RAITSAYY 81
Score = 58.4 bits (135), Expect = 2e-09
Identities = 20/51 (39%), Positives = 39/51 (76%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 404
+ IT++YYRGA+G +LVYDI T++++ +WL+ + +HA++++ M++G
Sbjct: 73 YRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVG 123
>Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical
protein K09A9.2 protein.
Length = 210
Score = 83.4 bits (197), Expect = 6e-17
Identities = 36/70 (51%), Positives = 49/70 (70%)
Frame = +1
Query: 46 AKKTYDLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQ 225
A Y FK ++IGD GVGK+C+L +F++ F TIG++F + +E+ G+KIKLQ
Sbjct: 4 APYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQ 63
Query: 226 IWDTAGQERF 255
IWDTAGQERF
Sbjct: 64 IWDTAGQERF 73
Score = 48.4 bits (110), Expect = 2e-06
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 404
F +T SYYRGA G ++VYDIT T++ + WL + N + ++G
Sbjct: 73 FRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLADAKSLTNPNTAIFLIG 123
>U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like
protein.
Length = 127
Score = 83.4 bits (197), Expect = 6e-17
Identities = 40/78 (51%), Positives = 55/78 (70%)
Frame = +1
Query: 58 YDLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDT 237
YD FK++LIGDSGVGK+ +L RF+ N F STIG++F +++ + GK +K QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFHLESKSTIGVEFATRSISVEGKTVKAQIWDT 67
Query: 238 AGQERFTPSRRRITAALW 291
AGQER+ R IT+A +
Sbjct: 68 AGQERY----RAITSAYY 81
Score = 56.4 bits (130), Expect = 8e-09
Identities = 20/51 (39%), Positives = 38/51 (74%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 404
+ IT++YYRGA+G +LVYDI T++++ +WL+ + +HA++++ M +G
Sbjct: 73 YRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMPVG 123
>AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical
protein Y45F3A.2 protein.
Length = 216
Score = 83.4 bits (197), Expect = 6e-17
Identities = 37/66 (56%), Positives = 50/66 (75%)
Frame = +1
Query: 58 YDLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDT 237
Y FK++L+G++GVGKTC++ +F+ F +TIG+DF IKTV++ KIKLQIWDT
Sbjct: 4 YKYLFKVVLVGNAGVGKTCLVRKFTQGIFPPGQSATIGVDFMIKTVKVGNDKIKLQIWDT 63
Query: 238 AGQERF 255
AGQERF
Sbjct: 64 AGQERF 69
Score = 54.0 bits (124), Expect = 4e-08
Identities = 23/51 (45%), Positives = 36/51 (70%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 404
F +IT SYYR A I+LVYD++ + +FD + +WL I+ +AN V K+++G
Sbjct: 69 FRSITQSYYRSAHAIVLVYDVSCQPSFDCLPEWLGEIESYANRRVLKILVG 119
>AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical
protein Y87G2A.4 protein.
Length = 215
Score = 82.6 bits (195), Expect = 1e-16
Identities = 42/75 (56%), Positives = 50/75 (66%), Gaps = 9/75 (12%)
Frame = +1
Query: 58 YDLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVEL---------RGK 210
YD K L +GDSGVGKT L R++DN FT FIST+GIDFK K V RG+
Sbjct: 4 YDYLIKFLALGDSGVGKTSFLHRYTDNTFTGQFISTVGIDFKEKKVVYKSSRGGFGGRGQ 63
Query: 211 KIKLQIWDTAGQERF 255
++ LQ+WDTAGQERF
Sbjct: 64 RVLLQLWDTAGQERF 78
Score = 49.2 bits (112), Expect = 1e-06
Identities = 19/41 (46%), Positives = 31/41 (75%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHA 374
F ++TT+++R AMG +L++DITNE++F +I WL + HA
Sbjct: 78 FRSLTTAFFRDAMGFILIFDITNEQSFLNIRDWLSQLKVHA 118
>AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family
protein 37 protein.
Length = 196
Score = 82.6 bits (195), Expect = 1e-16
Identities = 36/65 (55%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Frame = +1
Query: 64 LXFKLLLIGDSGVGKTCILFRFSDNHF-TTTFISTIGIDFKIKTVELRGKKIKLQIWDTA 240
+ K++L+GDS GKTC+L R+ D F FIST+GID++ K + + KK+KLQIWDTA
Sbjct: 1 MFLKVMLLGDSCTGKTCLLIRYKDGAFLNNNFISTVGIDYRNKLITMGDKKVKLQIWDTA 60
Query: 241 GQERF 255
GQERF
Sbjct: 61 GQERF 65
Score = 53.2 bits (122), Expect = 7e-08
Identities = 22/51 (43%), Positives = 33/51 (64%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 404
F ++TTSYYR A ++LVYDI N +F++ WL I E+ E V+ ++G
Sbjct: 65 FRSVTTSYYRDADALLLVYDIANRASFENCRNWLSQIKEYGKEAVQVTLVG 115
>AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein.
Length = 196
Score = 82.6 bits (195), Expect = 1e-16
Identities = 36/65 (55%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Frame = +1
Query: 64 LXFKLLLIGDSGVGKTCILFRFSDNHF-TTTFISTIGIDFKIKTVELRGKKIKLQIWDTA 240
+ K++L+GDS GKTC+L R+ D F FIST+GID++ K + + KK+KLQIWDTA
Sbjct: 1 MFLKVMLLGDSCTGKTCLLIRYKDGAFLNNNFISTVGIDYRNKLITMGDKKVKLQIWDTA 60
Query: 241 GQERF 255
GQERF
Sbjct: 61 GQERF 65
Score = 53.2 bits (122), Expect = 7e-08
Identities = 22/51 (43%), Positives = 33/51 (64%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 404
F ++TTSYYR A ++LVYDI N +F++ WL I E+ E V+ ++G
Sbjct: 65 FRSVTTSYYRDADALLLVYDIANRASFENCRNWLSQIKEYGKEAVQVTLVG 115
>AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein.
Length = 215
Score = 82.6 bits (195), Expect = 1e-16
Identities = 42/75 (56%), Positives = 50/75 (66%), Gaps = 9/75 (12%)
Frame = +1
Query: 58 YDLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVEL---------RGK 210
YD K L +GDSGVGKT L R++DN FT FIST+GIDFK K V RG+
Sbjct: 4 YDYLIKFLALGDSGVGKTSFLHRYTDNTFTGQFISTVGIDFKEKKVVYKSSRGGFGGRGQ 63
Query: 211 KIKLQIWDTAGQERF 255
++ LQ+WDTAGQERF
Sbjct: 64 RVLLQLWDTAGQERF 78
Score = 49.2 bits (112), Expect = 1e-06
Identities = 19/41 (46%), Positives = 31/41 (75%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHA 374
F ++TT+++R AMG +L++DITNE++F +I WL + HA
Sbjct: 78 FRSLTTAFFRDAMGFILIFDITNEQSFLNIRDWLSQLKVHA 118
>U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated
protein 108 protein.
Length = 214
Score = 81.4 bits (192), Expect = 2e-16
Identities = 35/67 (52%), Positives = 48/67 (71%)
Frame = +1
Query: 55 TYDLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWD 234
+Y FK ++IGD+GVGK+C+L +F+D F TIG++F + V + GK+IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGKQIKLQIWD 61
Query: 235 TAGQERF 255
TAGQE F
Sbjct: 62 TAGQESF 68
Score = 60.1 bits (139), Expect = 6e-10
Identities = 24/52 (46%), Positives = 36/52 (69%)
Frame = +3
Query: 249 AFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 404
+F +IT SYYRGA G +LVYDIT TF+ + WL + +H+N ++ M++G
Sbjct: 67 SFRSITRSYYRGAAGALLVYDITRRDTFNHLTSWLEDARQHSNSNMVIMLIG 118
>U68260-1|AAB16975.1| 69|Caenorhabditis elegans rab19-like
protein.
Length = 69
Score = 79.8 bits (188), Expect = 7e-16
Identities = 33/63 (52%), Positives = 48/63 (76%)
Frame = +1
Query: 58 YDLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDT 237
+D FK++L+GD GVGKTC++ RF + F +TIG+DF +KT+ + GK++KLQIWDT
Sbjct: 7 FDYLFKIVLVGDMGVGKTCVVQRFRNGTFVDRQGTTIGVDFTMKTLVVDGKRVKLQIWDT 66
Query: 238 AGQ 246
AG+
Sbjct: 67 AGE 69
>AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical
protein 4R79.2 protein.
Length = 395
Score = 79.8 bits (188), Expect = 7e-16
Identities = 35/66 (53%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Frame = +1
Query: 61 DLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVEL-RGKKIKLQIWDT 237
D FK++ +GDS VGKTC L RF N F F +TIG+DF +KT+++ + I +Q+WDT
Sbjct: 200 DRIFKVVFVGDSAVGKTCFLHRFCHNRFKPLFNATIGVDFTVKTMKIPPNRAIAMQLWDT 259
Query: 238 AGQERF 255
AGQERF
Sbjct: 260 AGQERF 265
Score = 39.9 bits (89), Expect = 7e-04
Identities = 15/54 (27%), Positives = 34/54 (62%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGQ*M 413
F +IT Y+R A G++L++D+T+E++F ++ W+ ++ ++ ++G M
Sbjct: 265 FRSITKQYFRKADGVVLMFDVTSEQSFLNVRNWIDSVRAGVDDATVMCLVGNKM 318
>U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein.
Length = 66
Score = 77.4 bits (182), Expect = 4e-15
Identities = 33/65 (50%), Positives = 47/65 (72%)
Frame = +1
Query: 55 TYDLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWD 234
+Y FK ++IGD+GVGK+C+L +F+D F TIG++F + V + GK+IKLQ+WD
Sbjct: 2 SYAYLFKHIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGKQIKLQMWD 61
Query: 235 TAGQE 249
TAGQE
Sbjct: 62 TAGQE 66
>AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical
protein Y71H2AM.12 protein.
Length = 195
Score = 77.0 bits (181), Expect = 5e-15
Identities = 36/62 (58%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELR-GKKIKLQIWDTAGQE 249
K++++G+SG GKT +L F DN F T ++TIGIDFK K V+L G+ I+LQ+WDTAGQE
Sbjct: 8 KVVVVGESGAGKTALLTCFLDNTFETDPLTTIGIDFKHKIVQLNDGQSIRLQLWDTAGQE 67
Query: 250 RF 255
RF
Sbjct: 68 RF 69
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 76.6 bits (180), Expect = 7e-15
Identities = 35/70 (50%), Positives = 51/70 (72%), Gaps = 3/70 (4%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 252
K+L+IG+SGVGK+ ++ RF D+ F +TIG+DF++ ++ + G ++KL IWDTAGQER
Sbjct: 13 KILIIGESGVGKSSLMLRFVDDVFDPEQAATIGVDFRVTSMAIDGNRVKLAIWDTAGQER 72
Query: 253 F---TPSRRR 273
F TPS R
Sbjct: 73 FRTLTPSYYR 82
Score = 54.4 bits (125), Expect = 3e-08
Identities = 20/51 (39%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEH-ANEDVEKMIL 401
F T+T SYYRGA G++ VYD+T+ +F+ + W++ +D + N+++ KM++
Sbjct: 73 FRTLTPSYYRGAQGVICVYDVTSRSSFEKLNHWMQEVDTYCTNDNIIKMMV 123
>Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical
protein F59B2.7 protein.
Length = 205
Score = 75.4 bits (177), Expect = 2e-14
Identities = 34/62 (54%), Positives = 45/62 (72%)
Frame = +1
Query: 70 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQE 249
FKL+ +G+ VGKT I+ RF + F T+ +TIGIDF KT+ L + I+LQ+WDTAGQE
Sbjct: 12 FKLVFLGEQSVGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQE 71
Query: 250 RF 255
RF
Sbjct: 72 RF 73
Score = 36.7 bits (81), Expect = 0.007
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 404
F ++ SY R + ++VYDITN +F KW+ ++ DV +++G
Sbjct: 73 FRSLIPSYIRDSSVAVVVYDITNANSFHQTTKWVDDVRNERGCDVIIVLVG 123
>U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like
protein.
Length = 69
Score = 74.9 bits (176), Expect = 2e-14
Identities = 32/66 (48%), Positives = 45/66 (68%)
Frame = +1
Query: 46 AKKTYDLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQ 225
A Y FK ++IGD GVGK+C+L +F++ F TIG++F + +E+ G+KIKLQ
Sbjct: 4 APYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQ 63
Query: 226 IWDTAG 243
IWDTAG
Sbjct: 64 IWDTAG 69
>Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical
protein W04G5.2 protein.
Length = 198
Score = 74.5 bits (175), Expect = 3e-14
Identities = 33/66 (50%), Positives = 45/66 (68%)
Frame = +1
Query: 58 YDLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDT 237
Y FK++LIG+ GVGK+ +L RF+ N F TIG++F K + + GK +K+QIWDT
Sbjct: 5 YYYLFKIVLIGNPGVGKSNLLSRFTRNEFNLKSKPTIGVEFATKIISVEGKAVKVQIWDT 64
Query: 238 AGQERF 255
AG ERF
Sbjct: 65 AGMERF 70
Score = 59.7 bits (138), Expect = 8e-10
Identities = 23/51 (45%), Positives = 37/51 (72%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 404
F +SYYRGA+G +LVYDI+ KT++ + +WL+ + +HANED+ ++G
Sbjct: 70 FRCGASSYYRGALGALLVYDISKHKTYESVEQWLKVLRDHANEDIVITLVG 120
>U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family protein
6.2 protein.
Length = 205
Score = 74.1 bits (174), Expect = 4e-14
Identities = 32/62 (51%), Positives = 45/62 (72%)
Frame = +1
Query: 70 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQE 249
FKL+ +G+ VGKT ++ RF + F T+ +TIGIDF KT+ L + ++LQ+WDTAGQE
Sbjct: 11 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 70
Query: 250 RF 255
RF
Sbjct: 71 RF 72
Score = 39.5 bits (88), Expect = 0.001
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 404
F ++ SY R + ++VYDITN +F KW+ ++ DV M++G
Sbjct: 72 FRSLIPSYIRDSTVAVVVYDITNSNSFHQTSKWIDDVRTERGSDVIIMLVG 122
>Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical
protein F11A5.4 protein.
Length = 203
Score = 72.1 bits (169), Expect = 1e-13
Identities = 32/65 (49%), Positives = 44/65 (67%)
Frame = +1
Query: 61 DLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTA 240
D FK ++IGD GVGK+ +L RF F + ST+GI+F + +E+ KK+KL +WDT
Sbjct: 4 DHVFKYVIIGDRGVGKSNLLLRFIGKPFDSIHPSTLGIEFGFRNLEIDRKKVKLHVWDTC 63
Query: 241 GQERF 255
GQERF
Sbjct: 64 GQERF 68
Score = 46.8 bits (106), Expect = 6e-06
Identities = 19/56 (33%), Positives = 34/56 (60%)
Frame = +3
Query: 237 CWAGAFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 404
C F ++ SYYR A+G +LVYDIT+ ++F + WL ++ + D+ +++G
Sbjct: 63 CGQERFRSLVGSYYRHAIGALLVYDITSRESFYHLEHWLTDLQRLGDPDIVIVLIG 118
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 72.1 bits (169), Expect = 1e-13
Identities = 29/62 (46%), Positives = 43/62 (69%)
Frame = +1
Query: 70 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQE 249
F++++ GD+ VGK+ + R FT ST+G+DF +KTV + G+ + LQ+WDTAGQE
Sbjct: 462 FRIVMCGDAAVGKSSFVMRVIRRQFTNQLPSTLGVDFHVKTVNVDGRNVALQLWDTAGQE 521
Query: 250 RF 255
RF
Sbjct: 522 RF 523
Score = 39.1 bits (87), Expect = 0.001
Identities = 16/51 (31%), Positives = 29/51 (56%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 404
F ++ SY+R A G +LVYD+ E++F + W+ I E + +++G
Sbjct: 523 FRSLCKSYFRRADGAILVYDVCAEQSFLRVRDWIETIKESTERSIPIILVG 573
>U68262-1|AAB16977.1| 74|Caenorhabditis elegans RAM1-like protein.
Length = 74
Score = 70.9 bits (166), Expect = 3e-13
Identities = 38/71 (53%), Positives = 44/71 (61%), Gaps = 9/71 (12%)
Frame = +1
Query: 58 YDLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVEL---------RGK 210
YD K L GD GVGKT L R++DN FT FIST+GIDFK K V RG+
Sbjct: 4 YDYLIKFLAPGDPGVGKTSFLHRYTDNTFTGQFISTVGIDFKEKKVVYESSRGGFGGRGQ 63
Query: 211 KIKLQIWDTAG 243
++ LQIWDTAG
Sbjct: 64 RVLLQIWDTAG 74
>Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical
protein F43D9.2 protein.
Length = 307
Score = 68.9 bits (161), Expect = 1e-12
Identities = 27/65 (41%), Positives = 46/65 (70%)
Frame = +1
Query: 70 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQE 249
FK++++G++ VGKTC+ FRF F +TIG+DF+ ++ + + +++Q+WDTAGQE
Sbjct: 101 FKVIIVGNAAVGKTCLSFRFCCGRFPEHTEATIGVDFRERSCVIENELLRVQLWDTAGQE 160
Query: 250 RFTPS 264
R+ S
Sbjct: 161 RYRQS 165
Score = 40.7 bits (91), Expect = 4e-04
Identities = 14/52 (26%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Frame = +3
Query: 258 TITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEH---ANEDVEKMILG 404
+I YYR ++ VYD+T ++F+D+ W++ ++H + +V ++++G
Sbjct: 165 SIVAHYYRNVNAVVFVYDVTCRESFNDLALWIKECEKHGLVGDSEVPRILIG 216
>Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical
protein W03C9.3 protein.
Length = 209
Score = 68.5 bits (160), Expect = 2e-12
Identities = 28/61 (45%), Positives = 44/61 (72%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 252
K++++GDSGVGKT ++ ++ + F+ + +TIG DF + V + + + LQIWDTAGQER
Sbjct: 11 KVIILGDSGVGKTSLMNQYVNRRFSNQYKATIGADFLTRDVNIDDRTVTLQIWDTAGQER 70
Query: 253 F 255
F
Sbjct: 71 F 71
Score = 31.5 bits (68), Expect = 0.25
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKW 350
F ++ ++YRGA +L +D+TN +F + W
Sbjct: 71 FQSLGVAFYRGADCCVLAFDVTNAASFKSLDSW 103
>Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical
protein F11A5.3 protein.
Length = 201
Score = 68.1 bits (159), Expect = 2e-12
Identities = 28/65 (43%), Positives = 44/65 (67%)
Frame = +1
Query: 61 DLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTA 240
D FK ++IGD GVGK+ +L RF+D F +T+G++F K +++ K++L++WDT
Sbjct: 4 DHMFKYVIIGDGGVGKSNLLLRFTDELFDPIHTTTLGVEFGYKDLQIDKYKVRLRVWDTC 63
Query: 241 GQERF 255
GQE F
Sbjct: 64 GQENF 68
Score = 51.6 bits (118), Expect = 2e-07
Identities = 21/56 (37%), Positives = 36/56 (64%)
Frame = +3
Query: 237 CWAGAFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 404
C F +I +YYR A+G +LVYDIT K+F + +WL ++ +H + ++ M++G
Sbjct: 63 CGQENFRSIIRAYYRNALGALLVYDITCRKSFVHLEQWLSDLRQHGHPEMVIMLIG 118
>Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical
protein D2013.1 protein.
Length = 229
Score = 66.1 bits (154), Expect = 9e-12
Identities = 29/63 (46%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Frame = +1
Query: 70 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELR-GKKIKLQIWDTAGQ 246
++L++IGDS VGK+ +L F++ T+G+DF + +ELR G ++KLQ+WDTAGQ
Sbjct: 18 YRLIVIGDSTVGKSSLLRYFTEGKMAEISDPTVGVDFYARMIELRPGYRVKLQLWDTAGQ 77
Query: 247 ERF 255
E+F
Sbjct: 78 EKF 80
Score = 44.4 bits (100), Expect = 3e-05
Identities = 14/35 (40%), Positives = 26/35 (74%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLR 356
F +IT SYYR ++G++ +YD TN ++F+ + W++
Sbjct: 80 FRSITKSYYRNSVGVLAIYDTTNRESFEHVENWVK 114
>Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical
protein R07B1.12 protein.
Length = 212
Score = 65.7 bits (153), Expect = 1e-11
Identities = 29/65 (44%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Frame = +1
Query: 64 LXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVEL-RGKKIKLQIWDTA 240
+ +K+L+IGD GVGKT I+ RF N F++ + +TIG+DF +K + + + LQIWD +
Sbjct: 10 ISYKVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPVDENTVVHLQIWDIS 69
Query: 241 GQERF 255
GQ+R+
Sbjct: 70 GQDRY 74
Score = 31.9 bits (69), Expect = 0.19
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDE 368
+ +T YY+ A ++V D T E+T + ++W ++D+
Sbjct: 74 YGVMTRVYYKDAHAAIIVLDSTRERTIEGALRWKTDLDQ 112
>DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GLO-1
protein.
Length = 212
Score = 65.7 bits (153), Expect = 1e-11
Identities = 29/65 (44%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Frame = +1
Query: 64 LXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVEL-RGKKIKLQIWDTA 240
+ +K+L+IGD GVGKT I+ RF N F++ + +TIG+DF +K + + + LQIWD +
Sbjct: 10 ISYKVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPVDENTVVHLQIWDIS 69
Query: 241 GQERF 255
GQ+R+
Sbjct: 70 GQDRY 74
Score = 31.9 bits (69), Expect = 0.19
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDE 368
+ +T YY+ A ++V D T E+T + ++W ++D+
Sbjct: 74 YGVMTRVYYKDAHAAIIVLDSTRERTIEGALRWKTDLDQ 112
>Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical
protein F26H9.6 protein.
Length = 208
Score = 62.1 bits (144), Expect = 2e-10
Identities = 31/62 (50%), Positives = 40/62 (64%)
Frame = +1
Query: 70 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQE 249
FKL+L+G+S VGK+ ++ RF F STIG F +TV L IK +IWDTAGQE
Sbjct: 20 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDATIKFEIWDTAGQE 79
Query: 250 RF 255
R+
Sbjct: 80 RY 81
Score = 47.2 bits (107), Expect = 5e-06
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 404
+H++ YYRGA ++VYDITN+++F W++ + A+ ++ + G
Sbjct: 81 YHSLAPMYYRGAQAAIVVYDITNQESFQKAKNWVKELQRQASPNIVMALAG 131
>Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical
protein T01B7.3 protein.
Length = 207
Score = 62.1 bits (144), Expect = 2e-10
Identities = 27/62 (43%), Positives = 42/62 (67%)
Frame = +1
Query: 70 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQE 249
FK++L+G+ VGK+ ++ RF +N F+ +STI F+ KTV + + L IWDTAGQE
Sbjct: 13 FKIVLLGEGCVGKSSLVLRFVENKFSCKHLSTIQASFQNKTVNVEDCQADLHIWDTAGQE 72
Query: 250 RF 255
++
Sbjct: 73 KY 74
Score = 47.2 bits (107), Expect = 5e-06
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Frame = +3
Query: 234 HCWAGA----FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMIL 401
H W A +H + YYRG+ G++LV+DIT+ K+F+ + W+ I E +I+
Sbjct: 64 HIWDTAGQEKYHALGPIYYRGSNGVLLVFDITDRKSFEKVKNWVLEIKTCLGNTAEILIV 123
Query: 402 G 404
G
Sbjct: 124 G 124
>U68254-1|AAB16969.1| 67|Caenorhabditis elegans rab6-like protein.
Length = 67
Score = 61.3 bits (142), Expect = 3e-10
Identities = 26/57 (45%), Positives = 40/57 (70%)
Frame = +1
Query: 70 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTA 240
F+L+ +G+ VGKT ++ RF + F T+ +TIGIDF KT+ L + ++LQ+WDTA
Sbjct: 11 FELVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQMWDTA 67
>L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 192
Score = 60.5 bits (140), Expect = 5e-10
Identities = 24/61 (39%), Positives = 42/61 (68%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 252
KL+++GD GKTC+L FS + F ++ T+ ++ + +E+ GK+++L +WDTAGQE
Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPDVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 65
Query: 253 F 255
+
Sbjct: 66 Y 66
>AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical
protein Y51H4A.3 protein.
Length = 192
Score = 60.5 bits (140), Expect = 5e-10
Identities = 24/61 (39%), Positives = 42/61 (68%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 252
KL+++GD GKTC+L FS + F ++ T+ ++ + +E+ GK+++L +WDTAGQE
Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPDVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 65
Query: 253 F 255
+
Sbjct: 66 Y 66
>U68253-1|AAB16968.1| 65|Caenorhabditis elegans rab6-like protein.
Length = 65
Score = 59.3 bits (137), Expect = 1e-09
Identities = 27/54 (50%), Positives = 37/54 (68%)
Frame = +1
Query: 70 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIW 231
FKL+ +G+ VGKT I+ RF + F T+ +TIGIDF KT+ L + I+LQIW
Sbjct: 12 FKLVFLGEQSVGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQIW 65
>Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical
protein K01G5.4 protein.
Length = 215
Score = 56.4 bits (130), Expect = 8e-09
Identities = 23/62 (37%), Positives = 36/62 (58%)
Frame = +1
Query: 70 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQE 249
FKL+L+GD G GKT + R F +++T+G++ +I+ +WDTAGQE
Sbjct: 10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQIRFNVWDTAGQE 69
Query: 250 RF 255
+F
Sbjct: 70 KF 71
>AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death
abnormality protein10, isoform a protein.
Length = 129
Score = 56.0 bits (129), Expect = 1e-08
Identities = 27/67 (40%), Positives = 39/67 (58%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 252
K +++GD VGKTC+L ++ N F +I T+ D V + G+ I L +WDTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGRPINLGLWDTAGQED 63
Query: 253 FTPSRRR 273
+ R R
Sbjct: 64 YDRLRER 70
>AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family
protein 18, isoform a protein.
Length = 193
Score = 55.6 bits (128), Expect = 1e-08
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 3/55 (5%)
Frame = +1
Query: 118 LFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQERF---TPSRRR 273
+ RF D+ F +TIG+DF++ ++ + G ++KL IWDTAGQERF TPS R
Sbjct: 1 MLRFVDDVFDPEQAATIGVDFRVTSMAIDGNRVKLAIWDTAGQERFRTLTPSYYR 55
Score = 54.4 bits (125), Expect = 3e-08
Identities = 20/51 (39%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEH-ANEDVEKMIL 401
F T+T SYYRGA G++ VYD+T+ +F+ + W++ +D + N+++ KM++
Sbjct: 46 FRTLTPSYYRGAQGVICVYDVTSRSSFEKLNHWMQEVDTYCTNDNIIKMMV 96
>Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical
protein K03D3.10 protein.
Length = 195
Score = 54.0 bits (124), Expect = 4e-08
Identities = 25/65 (38%), Positives = 38/65 (58%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 252
K +++GD VGKTC+L ++ N F +I T+ D V + G+ I L +WDTAGQ+
Sbjct: 5 KCVVVGDGAVGKTCLLLSYTTNAFPGEYILTV-FDTYSTNVMVDGRPINLSLWDTAGQDD 63
Query: 253 FTPSR 267
+ R
Sbjct: 64 YDQFR 68
>X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-related
protein protein.
Length = 191
Score = 54.0 bits (124), Expect = 4e-08
Identities = 25/61 (40%), Positives = 37/61 (60%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 252
K +++GD VGKTC+L ++ N F +I T+ D V + G+ I L +WDTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGRPINLGLWDTAGQED 63
Query: 253 F 255
+
Sbjct: 64 Y 64
>U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein.
Length = 195
Score = 54.0 bits (124), Expect = 4e-08
Identities = 25/65 (38%), Positives = 38/65 (58%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 252
K +++GD VGKTC+L ++ N F +I T+ D V + G+ I L +WDTAGQ+
Sbjct: 5 KCVVVGDGAVGKTCLLLSYTTNAFPGEYILTV-FDTYSTNVMVDGRPINLSLWDTAGQDD 63
Query: 253 FTPSR 267
+ R
Sbjct: 64 YDQFR 68
>L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 54.0 bits (124), Expect = 4e-08
Identities = 25/61 (40%), Positives = 37/61 (60%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 252
K +++GD VGKTC+L ++ N F +I T+ D V + G+ I L +WDTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGRPINLGLWDTAGQED 63
Query: 253 F 255
+
Sbjct: 64 Y 64
>L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 54.0 bits (124), Expect = 4e-08
Identities = 25/61 (40%), Positives = 37/61 (60%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 252
K +++GD VGKTC+L ++ N F +I T+ D V + G+ I L +WDTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGRPINLGLWDTAGQED 63
Query: 253 F 255
+
Sbjct: 64 Y 64
>AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse
engulfment proteinCED-10 protein.
Length = 191
Score = 54.0 bits (124), Expect = 4e-08
Identities = 25/61 (40%), Positives = 37/61 (60%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 252
K +++GD VGKTC+L ++ N F +I T+ D V + G+ I L +WDTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGRPINLGLWDTAGQED 63
Query: 253 F 255
+
Sbjct: 64 Y 64
>AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death
abnormality protein10, isoform b protein.
Length = 191
Score = 54.0 bits (124), Expect = 4e-08
Identities = 25/61 (40%), Positives = 37/61 (60%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 252
K +++GD VGKTC+L ++ N F +I T+ D V + G+ I L +WDTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGRPINLGLWDTAGQED 63
Query: 253 F 255
+
Sbjct: 64 Y 64
>Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical
protein ZK792.6 protein.
Length = 184
Score = 52.0 bits (119), Expect = 2e-07
Identities = 25/66 (37%), Positives = 39/66 (59%)
Frame = +1
Query: 70 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQE 249
+KL+++GD GVGK+ + + NHF + TI ++ K V + G+ L I DTAGQE
Sbjct: 4 YKLVVVGDGGVGKSALTIQLIQNHFVEEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQE 62
Query: 250 RFTPSR 267
++ R
Sbjct: 63 EYSAMR 68
Score = 26.6 bits (56), Expect = 7.1
Identities = 11/50 (22%), Positives = 23/50 (46%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMIL 401
+ + Y R G +LV+ + K+F+++ + I + D M+L
Sbjct: 64 YSAMRDQYMRTGEGFLLVFAVNEAKSFENVANYREQIRRVKDSDDVPMVL 113
>M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein
protein.
Length = 187
Score = 52.0 bits (119), Expect = 2e-07
Identities = 25/66 (37%), Positives = 39/66 (59%)
Frame = +1
Query: 70 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQE 249
+KL+++GD GVGK+ + + NHF + TI ++ K V + G+ L I DTAGQE
Sbjct: 7 YKLVVVGDGGVGKSALTIQLIQNHFVEEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQE 65
Query: 250 RFTPSR 267
++ R
Sbjct: 66 EYSAMR 71
Score = 26.6 bits (56), Expect = 7.1
Identities = 11/50 (22%), Positives = 23/50 (46%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMIL 401
+ + Y R G +LV+ + K+F+++ + I + D M+L
Sbjct: 67 YSAMRDQYMRTGEGFLLVFAVNEAKSFENVANYREQIRRVKDSDDVPMVL 116
>U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical
protein C56E6.2 protein.
Length = 266
Score = 51.6 bits (118), Expect = 2e-07
Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTV--ELRGKK--IKLQIWDTA 240
K++++GDSGVGKT I++R +TIG F V + R ++ ++LQ+WDTA
Sbjct: 54 KVVVLGDSGVGKTSIIYRHRYGAHYRPVNATIGASFVSFDVGADYRDREDVVRLQVWDTA 113
Query: 241 GQERF 255
GQERF
Sbjct: 114 GQERF 118
Score = 45.6 bits (103), Expect = 1e-05
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHA-NEDVEKMILG 404
F + Y R A ++VYD+T+ TF+D+ KWL+++D + ED ++G
Sbjct: 118 FRCMVPMYMRNADAALIVYDVTDRNTFEDVEKWLKDLDRSSGTEDANVYLIG 169
>U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical
protein R07G3.1 protein.
Length = 191
Score = 51.6 bits (118), Expect = 2e-07
Identities = 22/61 (36%), Positives = 40/61 (65%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 252
K +++GD VGKTC+L ++ N F + ++ T+ ++ + TV + G+ L ++DTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 63
Query: 253 F 255
+
Sbjct: 64 Y 64
>L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 188
Score = 51.6 bits (118), Expect = 2e-07
Identities = 22/61 (36%), Positives = 40/61 (65%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 252
K +++GD VGKTC+L ++ N F + ++ T+ ++ + TV + G+ L ++DTAGQE
Sbjct: 2 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 60
Query: 253 F 255
+
Sbjct: 61 Y 61
>Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical
protein C35C5.4 protein.
Length = 195
Score = 50.8 bits (116), Expect = 4e-07
Identities = 21/61 (34%), Positives = 38/61 (62%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 252
K +++GD VGKTC+L ++ + F ++ T+ ++ + + L G + L +WDTAGQE
Sbjct: 9 KCVVVGDGTVGKTCMLISYTTDSFPVQYVPTVFDNYSAQ-MSLDGNVVNLGLWDTAGQED 67
Query: 253 F 255
+
Sbjct: 68 Y 68
>U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase
protein.
Length = 195
Score = 50.8 bits (116), Expect = 4e-07
Identities = 21/61 (34%), Positives = 38/61 (62%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 252
K +++GD VGKTC+L ++ + F ++ T+ ++ + + L G + L +WDTAGQE
Sbjct: 9 KCVVVGDGTVGKTCMLISYTTDSFPVQYVPTVFDNYSAQ-MSLDGNVVNLGLWDTAGQED 67
Query: 253 F 255
+
Sbjct: 68 Y 68
>S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog
protein.
Length = 191
Score = 50.0 bits (114), Expect = 7e-07
Identities = 21/61 (34%), Positives = 39/61 (63%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 252
K +++GD VGKTC+L ++ N F + ++ T+ ++ + T + G+ L ++DTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TAMIGGEPYTLGLFDTAGQED 63
Query: 253 F 255
+
Sbjct: 64 Y 64
>U68261-1|AAB16976.1| 53|Caenorhabditis elegans rab19-like
protein.
Length = 53
Score = 49.2 bits (112), Expect = 1e-06
Identities = 21/48 (43%), Positives = 34/48 (70%)
Frame = +1
Query: 58 YDLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVEL 201
Y FK++L+ ++GVGKTC++ +F+ F +TIG+DF IKTV++
Sbjct: 4 YKYLFKVVLVPNAGVGKTCLVRKFTQGIFPPGQSATIGVDFMIKTVKV 51
>Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical
protein C27B7.8 protein.
Length = 188
Score = 48.8 bits (111), Expect = 2e-06
Identities = 24/66 (36%), Positives = 40/66 (60%)
Frame = +1
Query: 70 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQE 249
+K++++G GVGK+ + +F F + TI ++ K VE+ G++ L+I DTAG E
Sbjct: 4 YKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYR-KQVEVDGQQCMLEILDTAGTE 62
Query: 250 RFTPSR 267
+FT R
Sbjct: 63 QFTAMR 68
Score = 29.9 bits (64), Expect = 0.76
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMIL 401
F + Y + G +LVY IT + TF+D++ I + D MIL
Sbjct: 64 FTAMRDLYMKNGQGFVLVYSITAQSTFNDLMDLRDQILRVKDTDEVPMIL 113
>Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical
protein F17C8.4 protein.
Length = 211
Score = 48.8 bits (111), Expect = 2e-06
Identities = 25/68 (36%), Positives = 39/68 (57%)
Frame = +1
Query: 70 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQE 249
+KL++IGD GVGK+ + +F F + TI D I+ E+ G + + + DTAGQE
Sbjct: 18 YKLVVIGDGGVGKSSLTIQFFQKQFVDYYDPTIE-DQYIQHCEIDGNWVIMDVLDTAGQE 76
Query: 250 RFTPSRRR 273
F+ R +
Sbjct: 77 EFSAMREQ 84
>U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding
protein protein.
Length = 211
Score = 48.8 bits (111), Expect = 2e-06
Identities = 25/68 (36%), Positives = 39/68 (57%)
Frame = +1
Query: 70 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQE 249
+KL++IGD GVGK+ + +F F + TI D I+ E+ G + + + DTAGQE
Sbjct: 18 YKLVVIGDGGVGKSSLTIQFFQKQFVDYYDPTIE-DQYIQHCEIDGNWVIMDVLDTAGQE 76
Query: 250 RFTPSRRR 273
F+ R +
Sbjct: 77 EFSAMREQ 84
>Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical
protein C25D7.7 protein.
Length = 181
Score = 48.4 bits (110), Expect = 2e-06
Identities = 25/66 (37%), Positives = 40/66 (60%)
Frame = +1
Query: 70 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQE 249
FK++++G GVGK+ + +F + F + TI DF K +E+ G+ L+I DTAG E
Sbjct: 4 FKVVVLGSGGVGKSALTVQFVSSTFIEKYDPTIE-DFYRKEIEVDGQPSVLEILDTAGTE 62
Query: 250 RFTPSR 267
+F+ R
Sbjct: 63 QFSSMR 68
Score = 29.9 bits (64), Expect = 0.76
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDE-HANEDVEKMILG 404
F ++ Y + G ++VY IT+++TF DI I +E+V +++G
Sbjct: 64 FSSMRDLYIKNGQGFVVVYSITSQQTFHDIRNMKEQIVRVKGSENVPILLVG 115
>AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical
protein Y11D7A.4 protein.
Length = 248
Score = 47.6 bits (108), Expect = 4e-06
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +1
Query: 61 DLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVEL-RGKKIKLQIWDT 237
D K++++GD GKT I RF+ F ++ T+G+DF + + L ++ +Q+WD
Sbjct: 33 DKVIKIVVVGDGASGKTSICQRFAKESFDKSYHQTLGLDFFSRRITLPHEMQVLVQVWDI 92
Query: 238 AGQ 246
GQ
Sbjct: 93 GGQ 95
Score = 37.1 bits (82), Expect = 0.005
Identities = 17/45 (37%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Frame = +3
Query: 273 YYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEH--ANEDVEKMIL 401
Y GA + LVYD+TN K+F++ V WL + ++ ++E K++L
Sbjct: 105 YLTGANIVFLVYDVTNSKSFENAVDWLSVVKKNTKSSETPVKLVL 149
>Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical
protein F54C9.10 protein.
Length = 180
Score = 46.8 bits (106), Expect = 6e-06
Identities = 26/63 (41%), Positives = 35/63 (55%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 252
++L++G G GKT IL+R TT I TIG F ++ VE K +K Q+WD GQ
Sbjct: 18 RILILGLDGAGKTTILYRLQVGEVVTT-IPTIG--FNVEQVEY--KNLKFQVWDLGGQTS 72
Query: 253 FTP 261
P
Sbjct: 73 IRP 75
>Z71180-2|CAA94890.1| 207|Caenorhabditis elegans Hypothetical
protein F22E12.2 protein.
Length = 207
Score = 46.0 bits (104), Expect = 1e-05
Identities = 24/75 (32%), Positives = 42/75 (56%)
Frame = +1
Query: 43 MAKKTYDLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKL 222
MAK+ + K + +G++ VGKT ++ ++ N + ++ T +F + V + K I+L
Sbjct: 1 MAKEEDEKCLKCIFVGNAAVGKTSMIVSYTTNVYPHNYVPTAFDNFSV-VVLVDKKPIRL 59
Query: 223 QIWDTAGQERFTPSR 267
Q+ DTAGQ F R
Sbjct: 60 QLHDTAGQSSFDTLR 74
>Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical
protein C08F8.7 protein.
Length = 205
Score = 45.2 bits (102), Expect = 2e-05
Identities = 21/66 (31%), Positives = 41/66 (62%)
Frame = +1
Query: 70 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQE 249
+K++++G+ GVGK+ + ++ F T+ +TI ++ K ++ + +L+I DTAG E
Sbjct: 4 YKIVVLGNGGVGKSALTLQYVQGIFVHTYDATIEDSYR-KLSKVDAENARLEILDTAGTE 62
Query: 250 RFTPSR 267
+FT R
Sbjct: 63 QFTGMR 68
Score = 30.7 bits (66), Expect = 0.44
Identities = 13/51 (25%), Positives = 28/51 (54%)
Frame = +3
Query: 252 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILG 404
F + +YYR A G +LV+ + TF+++ + +I ++V +++G
Sbjct: 64 FTGMRETYYRTAQGFVLVFSLAETSTFENLKQTFTDIIAIRGKEVPMILVG 114
>U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.2 protein.
Length = 181
Score = 45.2 bits (102), Expect = 2e-05
Identities = 24/63 (38%), Positives = 35/63 (55%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 252
++L++G GKT IL++ TT I TIG F ++TVE K I +WD GQ++
Sbjct: 19 RILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVETVEY--KNISFTVWDVGGQDK 73
Query: 253 FTP 261
P
Sbjct: 74 IRP 76
>AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylation
factor related(20.5 kD) (arf-3) protein.
Length = 180
Score = 45.2 bits (102), Expect = 2e-05
Identities = 24/63 (38%), Positives = 35/63 (55%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 252
++L++G GKT IL++ TT I TIG F ++TVE K I +WD GQ++
Sbjct: 19 RILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVETVEY--KNISFTVWDVGGQDK 73
Query: 253 FTP 261
P
Sbjct: 74 IRP 76
>AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 3 protein.
Length = 180
Score = 45.2 bits (102), Expect = 2e-05
Identities = 24/63 (38%), Positives = 35/63 (55%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 252
++L++G GKT IL++ TT I TIG F ++TVE K I +WD GQ++
Sbjct: 19 RILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVETVEY--KNISFTVWDVGGQDK 73
Query: 253 FTP 261
P
Sbjct: 74 IRP 76
>U68263-1|AAB16978.1| 115|Caenorhabditis elegans rab-like protein.
Length = 115
Score = 44.4 bits (100), Expect = 3e-05
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTV--ELRGKK--IKLQIWDTA 240
K++++GDSGVGKT I++R +TIG F V + R ++ ++LQ+WDTA
Sbjct: 54 KVVVLGDSGVGKTSIIYRHRYGAHYRPVNATIGASFVSFDVGADYRDREDVVRLQMWDTA 113
Query: 241 GQ 246
GQ
Sbjct: 114 GQ 115
>AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical
protein Y116A8C.12 protein.
Length = 175
Score = 43.6 bits (98), Expect = 6e-05
Identities = 23/63 (36%), Positives = 35/63 (55%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 252
++L++G GKT IL++ TT I T+G F ++TV K IK +WD GQ++
Sbjct: 15 RILMLGLDAAGKTTILYKLKLGQSVTT-IPTVG--FNVETVTY--KNIKFNVWDVGGQDK 69
Query: 253 FTP 261
P
Sbjct: 70 IRP 72
>U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.1 protein.
Length = 179
Score = 42.3 bits (95), Expect = 1e-04
Identities = 24/60 (40%), Positives = 35/60 (58%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 252
+ L++G G GKT IL++ N T I TIG F ++TV + KI L +WD GQ++
Sbjct: 19 RTLMLGLDGAGKTTILYKLKLNETVNT-IPTIG--FNVETVTFQ--KITLTVWDVGGQKK 73
>AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-related
gtpase) homologprotein 1 protein.
Length = 213
Score = 42.3 bits (95), Expect = 1e-04
Identities = 21/65 (32%), Positives = 37/65 (56%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 252
K++++G GVGK+ + +F + F + T ++ K V L G++ + I DTAGQE
Sbjct: 19 KVIMVGTGGVGKSALTLQFMYDEFVEEYEPTKADSYRKKVV-LDGEECSIDILDTAGQED 77
Query: 253 FTPSR 267
++ R
Sbjct: 78 YSAIR 82
>U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding
protein protein.
Length = 212
Score = 41.1 bits (92), Expect = 3e-04
Identities = 22/67 (32%), Positives = 36/67 (53%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 252
+++++G GVGK+ + +F +F + TI D K + KL+I DTAGQE
Sbjct: 19 RIVVVGGGGVGKSALTIQFIQRYFVQDYDPTIE-DSYTKQCFVDEDLCKLEILDTAGQEE 77
Query: 253 FTPSRRR 273
F+ R +
Sbjct: 78 FSTMREQ 84
>U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog
protein.
Length = 212
Score = 41.1 bits (92), Expect = 3e-04
Identities = 22/67 (32%), Positives = 36/67 (53%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 252
+++++G GVGK+ + +F +F + TI D K + KL+I DTAGQE
Sbjct: 19 RIVVVGGGGVGKSALTIQFIQRYFVQDYDPTIE-DSYTKQCFVDEDLCKLEILDTAGQEE 77
Query: 253 FTPSRRR 273
F+ R +
Sbjct: 78 FSTMREQ 84
>CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical
protein C44C11.1b protein.
Length = 168
Score = 41.1 bits (92), Expect = 3e-04
Identities = 22/67 (32%), Positives = 36/67 (53%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 252
+++++G GVGK+ + +F +F + TI D K + KL+I DTAGQE
Sbjct: 19 RIVVVGGGGVGKSALTIQFIQRYFVQDYDPTIE-DSYTKQCFVDEDLCKLEILDTAGQEE 77
Query: 253 FTPSRRR 273
F+ R +
Sbjct: 78 FSTMREQ 84
>CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical
protein C44C11.1a protein.
Length = 212
Score = 41.1 bits (92), Expect = 3e-04
Identities = 22/67 (32%), Positives = 36/67 (53%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 252
+++++G GVGK+ + +F +F + TI D K + KL+I DTAGQE
Sbjct: 19 RIVVVGGGGVGKSALTIQFIQRYFVQDYDPTIE-DSYTKQCFVDEDLCKLEILDTAGQEE 77
Query: 253 FTPSRRR 273
F+ R +
Sbjct: 78 FSTMREQ 84
>U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein.
Length = 66
Score = 40.7 bits (91), Expect = 4e-04
Identities = 14/52 (26%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Frame = +3
Query: 258 TITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEH---ANEDVEKMILG 404
+I YYR ++ VYD+T ++F+D+ W++ ++H + +V ++++G
Sbjct: 12 SIVAHYYRNVNAVVFVYDVTCRESFNDLALWIKECEKHGLVGDSEVPRILIG 63
>AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical
protein Y32F6B.3 protein.
Length = 187
Score = 39.5 bits (88), Expect = 0.001
Identities = 18/65 (27%), Positives = 37/65 (56%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 252
KL+++GD+ GKT +L ++ F + +T+ ++ + +V + K + ++DTAGQ
Sbjct: 6 KLVVVGDTYTGKTSLLVAYTKKQFLDNYTTTVFDNWAV-SVHIDNKNYAVNLFDTAGQGN 64
Query: 253 FTPSR 267
+ R
Sbjct: 65 YEQIR 69
>Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical
protein F54C8.5 protein.
Length = 207
Score = 37.9 bits (84), Expect = 0.003
Identities = 21/62 (33%), Positives = 35/62 (56%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 252
K+ ++G VGK+ ++ RF+ N F + STI D K + + L++ DTAGQ+
Sbjct: 15 KVAVMGYPHVGKSALVLRFTQNIFPERYESTIE-DQHSKHIAAFHRDYHLRVTDTAGQQE 73
Query: 253 FT 258
+T
Sbjct: 74 YT 75
>Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical
protein F19H8.3 protein.
Length = 184
Score = 35.9 bits (79), Expect = 0.012
Identities = 25/76 (32%), Positives = 33/76 (43%)
Frame = +1
Query: 34 ICKMAKKTYDLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKK 213
+ K K ++LL+G GKT IL + S T G F +KTV G
Sbjct: 6 VLKSFKSPSGREIRILLLGLDNAGKTTILKQLSSED-VQHVTPTKG--FNVKTVAAMG-D 61
Query: 214 IKLQIWDTAGQERFTP 261
I+L +WD GQ P
Sbjct: 62 IRLNVWDIGGQRSIRP 77
>U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific
family, class rprotein 2 protein.
Length = 332
Score = 35.5 bits (78), Expect = 0.015
Identities = 23/72 (31%), Positives = 40/72 (55%)
Frame = +1
Query: 70 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQE 249
++L+++G + VGKT I+ R+ N F++ + TI D + ++G + L I DT
Sbjct: 18 YRLVVLGSAKVGKTNIIRRYLYNEFSSKYKETIE-DLHSREFRIQGVPLPLDILDT--NF 74
Query: 250 RFTPSRRRITAA 285
F P RR++ A
Sbjct: 75 NF-PDMRRLSIA 85
>AL117204-37|CAB55148.2| 248|Caenorhabditis elegans Hypothetical
protein Y116A8C.10b protein.
Length = 248
Score = 35.1 bits (77), Expect = 0.020
Identities = 11/31 (35%), Positives = 24/31 (77%)
Frame = +3
Query: 273 YYRGAMGIMLVYDITNEKTFDDIVKWLRNID 365
++ GA+G +LV+D+TN+++ +++ WL +D
Sbjct: 86 FFEGAVGAILVHDLTNKRSEENLATWLTMLD 116
>Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical
protein Y57G11C.13 protein.
Length = 185
Score = 34.7 bits (76), Expect = 0.027
Identities = 17/61 (27%), Positives = 30/61 (49%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 252
+L L+G GKT + + FT I T+G + + ++ + +++WD GQ R
Sbjct: 22 ELTLVGLQNSGKTTFVNVIASGQFTEDMIPTVGFNMR----KITKGNVTIKLWDIGGQPR 77
Query: 253 F 255
F
Sbjct: 78 F 78
>U68255-1|AAB16970.1| 70|Caenorhabditis elegans rab7-like protein.
Length = 70
Score = 34.7 bits (76), Expect = 0.027
Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 9/60 (15%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFS---------DNHFTTTFISTIGIDFKIKTVELRGKKIKLQ 225
K++++GDSGVGKT ++ ++ + F + +TIG DF + V + + + LQ
Sbjct: 11 KVIILGDSGVGKTSLMNQYEIGDLMNQYVNRRFMNQYKATIGADFLTRDVNIDDRTVTLQ 70
>AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G
protein indispensablefor equal chromosome segregation
protein.
Length = 185
Score = 34.7 bits (76), Expect = 0.027
Identities = 17/61 (27%), Positives = 30/61 (49%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 252
+L L+G GKT + + FT I T+G + + ++ + +++WD GQ R
Sbjct: 22 ELTLVGLQNSGKTTFVNVIASGQFTEDMIPTVGFNMR----KITKGNVTIKLWDIGGQPR 77
Query: 253 F 255
F
Sbjct: 78 F 78
>Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical
protein ZK1320.6 protein.
Length = 539
Score = 33.1 bits (72), Expect = 0.082
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAG 243
+++L+G G GKT I+ R T I F I+T+ K +L WD G
Sbjct: 371 RVVLLGLDGAGKTSIVRRLKKVQMDTVMAPHPTIGFNIETIHY--KNYRLNFWDVGG 425
>U23938-1|AAA65452.1| 35|Caenorhabditis elegans pra-1 protein.
Length = 35
Score = 32.7 bits (71), Expect = 0.11
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +1
Query: 79 LLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFK 183
L+IG+SGVGK+ ++ RF D+ +IG+ F+
Sbjct: 1 LIIGESGVGKSSLMLRFVDDVVDPERAVSIGVPFR 35
>Z66561-1|CAA91454.1| 635|Caenorhabditis elegans Hypothetical
protein F08G12.1 protein.
Length = 635
Score = 31.5 bits (68), Expect = 0.25
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKK--IKLQIWDTAGQ 246
K+++ GD VGKTC+ R F +++T I R +K+ +WD Q
Sbjct: 45 KIVIRGDRNVGKTCLWKRLQGLSFQEEYVATEEIQVANINWNYRATDDVVKVDVWDIVDQ 104
>Z49912-5|CAA90136.1| 312|Caenorhabditis elegans Hypothetical
protein T24F1.1 protein.
Length = 312
Score = 31.5 bits (68), Expect = 0.25
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +1
Query: 73 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIG--IDFKIKTVELRGKKIKLQIWDTAGQ 246
K+LL+G SG GKT + N+ S +G I+ + V+ G + L +WD GQ
Sbjct: 6 KVLLMGKSGSGKTSMRSIIFANYIARD-CSRLGPTIEVEHAHVKFLGNMV-LHLWDCGGQ 63
Query: 247 ERF 255
E F
Sbjct: 64 ESF 66
>AL032647-3|CAA21690.1| 316|Caenorhabditis elegans Hypothetical
protein Y57A10B.3 protein.
Length = 316
Score = 31.5 bits (68), Expect = 0.25
Identities = 15/67 (22%), Positives = 32/67 (47%)
Frame = +1
Query: 133 DNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQERFTPSRRRITAALWASCSYTT 312
D + F I +++ + + + +K+ + D G+ + SR R + +AS +YT
Sbjct: 77 DKYEVAGFSGQITVNYTTDSEGQKTRTVKVNLTDPGGEIWYNVSRSRYLSTYYASYNYTL 136
Query: 313 *QMKKHL 333
K+H+
Sbjct: 137 EPQKRHM 143
>Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical
protein C27H2.2a protein.
Length = 906
Score = 30.7 bits (66), Expect = 0.44
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -3
Query: 248 SCPAVSHIWSFIFLPLNSTVFILKSIPIVEIKVVVKWLSENL 123
+CP V IW PLNS++ + K +IK+ + ++E +
Sbjct: 682 ACPEVQEIWLSTCYPLNSSLIVPKDKLKAQIKLQIAHITEQI 723
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 28.3 bits (60), Expect = 2.3
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2
Query: 257 HHHDVVLPRRYGHHARIRH 313
HHHD P R+GHH H
Sbjct: 403 HHHDGRSPSRHGHHHHHHH 421
>U23168-5|ABD63247.1| 2702|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform e protein.
Length = 2702
Score = 27.9 bits (59), Expect = 3.1
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = +3
Query: 210 ENKAPDMGHCWAGAFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVE 389
E ++ D+ A AF + + A+ I ++I + KT DDIVK ++ HA +
Sbjct: 2416 ERRSRDLRQNAAPAFKPVRRNSLLQALAIGSPHNIPHFKTLDDIVKAIK----HAGLEYS 2471
Query: 390 KMILG 404
+I G
Sbjct: 2472 NLIFG 2476
>U23168-2|AAC38806.2| 1633|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform a protein.
Length = 1633
Score = 27.9 bits (59), Expect = 3.1
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = +3
Query: 210 ENKAPDMGHCWAGAFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVE 389
E ++ D+ A AF + + A+ I ++I + KT DDIVK ++ HA +
Sbjct: 1347 ERRSRDLRQNAAPAFKPVRRNSLLQALAIGSPHNIPHFKTLDDIVKAIK----HAGLEYS 1402
Query: 390 KMILG 404
+I G
Sbjct: 1403 NLIFG 1407
>U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform c protein.
Length = 7548
Score = 27.9 bits (59), Expect = 3.1
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = +3
Query: 210 ENKAPDMGHCWAGAFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVE 389
E ++ D+ A AF + + A+ I ++I + KT DDIVK ++ HA +
Sbjct: 7262 ERRSRDLRQNAAPAFKPVRRNSLLQALAIGSPHNIPHFKTLDDIVKAIK----HAGLEYS 7317
Query: 390 KMILG 404
+I G
Sbjct: 7318 NLIFG 7322
>AC006659-2|AAF39883.2| 977|Caenorhabditis elegans Hypothetical
protein H16O14.1 protein.
Length = 977
Score = 27.5 bits (58), Expect = 4.1
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Frame = +3
Query: 213 NKAPDMGHCWAGAFHTITT----SYYRGAMGIMLVYDITNEKTFDDI 341
N P++G F+ TT Y GA+ I+L+Y K FDDI
Sbjct: 75 NLGPELGGAVGILFYLGTTIAASMYITGAIEILLLYIYPQAKLFDDI 121
>AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical
protein Y53F4B.9 protein.
Length = 1168
Score = 27.1 bits (57), Expect = 5.4
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = +1
Query: 61 DLXFKLLLIGDSGVGKTCILFR 126
DL L+LIG SGVGKT LFR
Sbjct: 814 DLENPLVLIGPSGVGKTA-LFR 834
>Z78198-6|CAB01572.2| 848|Caenorhabditis elegans Hypothetical
protein F55C5.7 protein.
Length = 848
Score = 26.6 bits (56), Expect = 7.1
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = -3
Query: 173 IPIVEIKVVVKWLSENLNNMHVFPTPESPMRSSLN 69
+PI E KVVV +++++L NM + PTP +R SL+
Sbjct: 744 LPIPE-KVVVSFVAKDLLNMLLVPTP--ALRPSLD 775
>Z49912-9|CAA90141.2| 1067|Caenorhabditis elegans Hypothetical
protein T24F1.6a protein.
Length = 1067
Score = 26.6 bits (56), Expect = 7.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 210 ENKAPDMGHCWAGAFHTITTSYYR 281
+ KAP+MGH + G + +T Y R
Sbjct: 179 KEKAPEMGHQYIGTYSGLTRMYPR 202
>Z49912-8|CAE54898.1| 1067|Caenorhabditis elegans Hypothetical
protein T24F1.6b protein.
Length = 1067
Score = 26.6 bits (56), Expect = 7.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 210 ENKAPDMGHCWAGAFHTITTSYYR 281
+ KAP+MGH + G + +T Y R
Sbjct: 179 KEKAPEMGHQYIGTYSGLTRMYPR 202
>Z49907-13|CAA90091.2| 1067|Caenorhabditis elegans Hypothetical
protein T24F1.6a protein.
Length = 1067
Score = 26.6 bits (56), Expect = 7.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 210 ENKAPDMGHCWAGAFHTITTSYYR 281
+ KAP+MGH + G + +T Y R
Sbjct: 179 KEKAPEMGHQYIGTYSGLTRMYPR 202
>Z49907-12|CAE54883.1| 1067|Caenorhabditis elegans Hypothetical
protein T24F1.6b protein.
Length = 1067
Score = 26.6 bits (56), Expect = 7.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 210 ENKAPDMGHCWAGAFHTITTSYYR 281
+ KAP+MGH + G + +T Y R
Sbjct: 179 KEKAPEMGHQYIGTYSGLTRMYPR 202
>Z37093-6|CAJ85783.1| 176|Caenorhabditis elegans Hypothetical
protein ZK669.5b protein.
Length = 176
Score = 26.2 bits (55), Expect = 9.4
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +1
Query: 55 TYDLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGID 177
+YD FK L+ G VGK +L F + +++ +D
Sbjct: 7 SYDRVFKFLIFGGKSVGKKTLLRSFCTEGDNESIWTSLTVD 47
>Z37093-5|CAJ85782.1| 212|Caenorhabditis elegans Hypothetical
protein ZK669.5a protein.
Length = 212
Score = 26.2 bits (55), Expect = 9.4
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +1
Query: 55 TYDLXFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGID 177
+YD FK L+ G VGK +L F + +++ +D
Sbjct: 7 SYDRVFKFLIFGGKSVGKKTLLRSFCTEGDNESIWTSLTVD 47
>AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical
protein F55F10.1 protein.
Length = 4368
Score = 26.2 bits (55), Expect = 9.4
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +1
Query: 76 LLLIGDSGVGKTCILFRFSD 135
LLL+G++GVGKT ++ +D
Sbjct: 382 LLLVGETGVGKTSVVQAVAD 401
>AC087079-5|ABC48240.1| 367|Caenorhabditis elegans Hypothetical
protein Y37E3.5b protein.
Length = 367
Score = 26.2 bits (55), Expect = 9.4
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = +3
Query: 261 ITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEK 392
I ++YY GI+ V D + ++TF + ++ L ++ +N V+K
Sbjct: 85 IWSNYYAEVHGIIYVIDYSTDETFTESIEALHSLT--SNPHVQK 126
>AC087079-4|ABC48239.1| 370|Caenorhabditis elegans Hypothetical
protein Y37E3.5a protein.
Length = 370
Score = 26.2 bits (55), Expect = 9.4
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = +3
Query: 261 ITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEK 392
I ++YY GI+ V D + ++TF + ++ L ++ +N V+K
Sbjct: 85 IWSNYYAEVHGIIYVIDYSTDETFTESIEALHSLT--SNPHVQK 126
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,227,678
Number of Sequences: 27780
Number of extensions: 212552
Number of successful extensions: 955
Number of sequences better than 10.0: 118
Number of HSP's better than 10.0 without gapping: 835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 921
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 673122114
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -