Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0130
         (626 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0187 + 21433842-21433887,21434504-21435246,21435437-214354...    30   1.7  
09_06_0123 - 20997498-20997512,20998015-20998100,20999066-209991...    29   3.0  
06_03_0143 + 17215975-17216745                                         28   5.3  
05_06_0152 - 26008495-26009074,26010555-26011361,26016536-260166...    28   5.3  
05_05_0238 + 23540618-23540728,23540850-23540939                       28   7.0  
07_03_1557 - 27699675-27699972,27700546-27700630,27700741-277008...    27   9.2  
06_03_0267 + 18970578-18972464                                         27   9.2  

>09_06_0187 +
           21433842-21433887,21434504-21435246,21435437-21435484,
           21435929-21436814,21436967-21437056,21437543-21438417
          Length = 895

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +2

Query: 182 FISRMNPYSPELNYFLSYQYCR 247
           FI R+  +SP++ YF SY+Y R
Sbjct: 190 FIGRLPEWSPDVRYFTSYEYPR 211


>09_06_0123 -
           20997498-20997512,20998015-20998100,20999066-20999198,
           20999264-20999341,21000130-21000216,21001164-21001254,
           21001338-21001488,21001567-21002296,21002404-21002820
          Length = 595

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +3

Query: 468 QHGPSRRTTRKHCFTTHRPRHGRYSRNGNTSWTNG 572
           Q  P R ++  HC  ++  R G  S  G+ SW +G
Sbjct: 185 QSNPVRHSSGGHCAGSNSSRDGNTSDGGDGSWNDG 219


>06_03_0143 + 17215975-17216745
          Length = 256

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = -2

Query: 517 CVVKQCFLVVRLEGPCCHQHAGQEHRWAVSACS 419
           C V  C+  VRL  P C   AG+  R    ACS
Sbjct: 202 CDVPFCYCRVRLRRPACAAPAGRAARRLEKACS 234


>05_06_0152 -
           26008495-26009074,26010555-26011361,26016536-26016657,
           26016860-26017462
          Length = 703

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
 Frame = +3

Query: 519 RPRHGRYSRNGNTSWTNGLASRSKFR---PSHWEPQHCG 626
           R R   +     T+W +G +SRS F       WE  HCG
Sbjct: 485 RARVTAHKEGAATAWADGGSSRSAFARRGKRKWEAPHCG 523


>05_05_0238 + 23540618-23540728,23540850-23540939
          Length = 66

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +3

Query: 516 HRPRHGRYSRNGNTSWTNGLASRSK 590
           HR  HGR    GN +W   +A R K
Sbjct: 31  HRAAHGRPKHIGNDNWDMAMARRDK 55


>07_03_1557 -
           27699675-27699972,27700546-27700630,27700741-27700847,
           27700942-27701135,27701252-27701368,27701466-27701631,
           27701723-27701887,27702185-27703428
          Length = 791

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 12/42 (28%), Positives = 17/42 (40%)
 Frame = +3

Query: 471 HGPSRRTTRKHCFTTHRPRHGRYSRNGNTSWTNGLASRSKFR 596
           HG  +      C      RHG+ +  G  SW +G     +FR
Sbjct: 83  HGAGKYLWTDGCMYEGEWRHGKATGRGRFSWPSGATYEGEFR 124


>06_03_0267 + 18970578-18972464
          Length = 628

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 15/46 (32%), Positives = 20/46 (43%)
 Frame = -2

Query: 520 RCVVKQCFLVVRLEGPCCHQHAGQEHRWAVSACS*KSH*MADRCSS 383
           RCVV  C    R    CC +H G + R   + CS  +    D C +
Sbjct: 448 RCVVPGCTKSARGRTDCCVRHGGGK-RCQFTGCSKSAQGSTDFCKA 492


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,695,755
Number of Sequences: 37544
Number of extensions: 422445
Number of successful extensions: 1101
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1101
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1525730988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)