Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0127
(700 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir relat... 51 7e-07
Z70310-7|CAA94364.1| 607|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z50177-6|CAA90547.1| 287|Caenorhabditis elegans Hypothetical pr... 33 0.15
U41996-5|AAA83474.1| 296|Caenorhabditis elegans Hypothetical pr... 32 0.45
Z50177-4|CAA90546.1| 287|Caenorhabditis elegans Hypothetical pr... 31 1.0
U66261-1|AAB07022.1| 1525|Caenorhabditis elegans multidrug resis... 29 3.2
U41554-4|AAA83299.2| 1525|Caenorhabditis elegans Multidrug resis... 29 3.2
Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical p... 28 5.6
Z54342-16|CAA91156.1| 755|Caenorhabditis elegans Hypothetical p... 27 9.8
Z47072-4|CAA87370.1| 755|Caenorhabditis elegans Hypothetical pr... 27 9.8
AC103567-4|AAL35731.2| 598|Caenorhabditis elegans Hypothetical ... 27 9.8
>U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir related
protein 2.4 protein.
Length = 299
Score = 51.2 bits (117), Expect = 7e-07
Identities = 26/53 (49%), Positives = 32/53 (60%)
Frame = +2
Query: 350 QLVKDSKHIVVHTGAGISTSAGIPDFRGPNGVWTLEKEGKKPTINVSFADAQP 508
Q + K I V GAG+ST + +PDFRG GVWTL+ EGK V F A+P
Sbjct: 50 QAKQTGKPIFVLIGAGVSTGSKLPDFRGKQGVWTLQAEGKHAE-GVDFQVARP 101
>Z70310-7|CAA94364.1| 607|Caenorhabditis elegans Hypothetical
protein R11A8.4 protein.
Length = 607
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/33 (57%), Positives = 25/33 (75%)
Frame = +2
Query: 350 QLVKDSKHIVVHTGAGISTSAGIPDFRGPNGVW 448
+L K KHI+V TGAG+S S GIPDFR +G++
Sbjct: 140 ELFKTKKHILVLTGAGVSVSCGIPDFRSKDGIY 172
>Z50177-6|CAA90547.1| 287|Caenorhabditis elegans Hypothetical
protein F46G10.3 protein.
Length = 287
Score = 33.5 bits (73), Expect = 0.15
Identities = 16/34 (47%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = +2
Query: 353 LVKDSKHIVVHTGAGISTSAGIPDFRGPN-GVWT 451
LV +++ TGAGIST +GIPD+R + G++T
Sbjct: 23 LVGTVDKLLIITGAGISTESGIPDYRSKDVGLYT 56
>U41996-5|AAA83474.1| 296|Caenorhabditis elegans Hypothetical
protein F38E1.6 protein.
Length = 296
Score = 31.9 bits (69), Expect = 0.45
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Frame = -3
Query: 395 QLQCGQQYVYYLSQVEPRVHISGSVCHLNQISLGLLVYLCFHKVIVLCIIARHFWETIYL 216
+LQC Y YY+ + V LNQI L +VY+ F + V+ + R+ +T L
Sbjct: 97 ELQCAHSYSYYILVLANFVIFQ----VLNQIILWEIVYITFLRATVI-LEVRYGMKTENL 151
Query: 215 MVLTQIFIEPLFKFKL-----RIFFYNMD 144
+ + FI LF L RIFF+ ++
Sbjct: 152 KLYMRRFITVLFTIFLINHTVRIFFHRIE 180
>Z50177-4|CAA90546.1| 287|Caenorhabditis elegans Hypothetical
protein F46G10.7a protein.
Length = 287
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/19 (63%), Positives = 17/19 (89%)
Frame = +2
Query: 374 IVVHTGAGISTSAGIPDFR 430
++V +GAGIST +GIPD+R
Sbjct: 30 LLVISGAGISTESGIPDYR 48
>U66261-1|AAB07022.1| 1525|Caenorhabditis elegans multidrug
resistance related protein2 protein.
Length = 1525
Score = 29.1 bits (62), Expect = 3.2
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = -3
Query: 341 VHISGSVCHLNQISLGLLVYL-CFHKVIVLCIIARHFWETIYLMVLTQIFIEPLFKFKLR 165
VH G + I L L++ + C +K I+ + +W L+V+ I P F+F L
Sbjct: 107 VHFYGDLVQFGGICLALILTVACKNKGIITSGVITLYW---LLVVVCGI---PEFRFYLS 160
Query: 164 IFFYNMDTEESF*LWKYLISYT 99
F YN E Y+I++T
Sbjct: 161 GFIYNEYALEGIRATLYIIAFT 182
>U41554-4|AAA83299.2| 1525|Caenorhabditis elegans Multidrug
resistance protein familyprotein 2 protein.
Length = 1525
Score = 29.1 bits (62), Expect = 3.2
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = -3
Query: 341 VHISGSVCHLNQISLGLLVYL-CFHKVIVLCIIARHFWETIYLMVLTQIFIEPLFKFKLR 165
VH G + I L L++ + C +K I+ + +W L+V+ I P F+F L
Sbjct: 107 VHFYGDLVQFGGICLALILTVACKNKGIITSGVITLYW---LLVVVCGI---PEFRFYLS 160
Query: 164 IFFYNMDTEESF*LWKYLISYT 99
F YN E Y+I++T
Sbjct: 161 GFIYNEYALEGIRATLYIIAFT 182
>Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical protein
H05L14.2 protein.
Length = 2162
Score = 28.3 bits (60), Expect = 5.6
Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 4/83 (4%)
Frame = +2
Query: 263 SPYEN--KGILGVPEKFDSNDKLNQKCVLLAQLVKDSKHIVVHTGAGISTSAGIPDFRGP 436
SPY K +L E + +K N K + L+ H H G S + D
Sbjct: 1675 SPYFTTLKSVLKTDESIQTGEKKNVKFAAIDDLIV---HDAPHPTDGYSNRSTQSDNFEM 1731
Query: 437 NGVWTLEKE--GKKPTINVSFAD 499
N +W LEKE + N++FA+
Sbjct: 1732 NQIWDLEKEVIRQLKRDNITFAE 1754
>Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical
protein H05L14.2 protein.
Length = 2162
Score = 28.3 bits (60), Expect = 5.6
Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 4/83 (4%)
Frame = +2
Query: 263 SPYEN--KGILGVPEKFDSNDKLNQKCVLLAQLVKDSKHIVVHTGAGISTSAGIPDFRGP 436
SPY K +L E + +K N K + L+ H H G S + D
Sbjct: 1675 SPYFTTLKSVLKTDESIQTGEKKNVKFAAIDDLIV---HDAPHPTDGYSNRSTQSDNFEM 1731
Query: 437 NGVWTLEKE--GKKPTINVSFAD 499
N +W LEKE + N++FA+
Sbjct: 1732 NQIWDLEKEVIRQLKRDNITFAE 1754
>Z54342-16|CAA91156.1| 755|Caenorhabditis elegans Hypothetical
protein F26C11.1 protein.
Length = 755
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -1
Query: 631 QPKEFSWDTRLEMKVPSKCFDSQCI 557
QP + SW+TR+ K K F CI
Sbjct: 130 QPDKNSWETRMAKKYYDKLFKEYCI 154
>Z47072-4|CAA87370.1| 755|Caenorhabditis elegans Hypothetical
protein F26C11.1 protein.
Length = 755
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -1
Query: 631 QPKEFSWDTRLEMKVPSKCFDSQCI 557
QP + SW+TR+ K K F CI
Sbjct: 130 QPDKNSWETRMAKKYYDKLFKEYCI 154
>AC103567-4|AAL35731.2| 598|Caenorhabditis elegans Hypothetical
protein Y51F10.4 protein.
Length = 598
Score = 27.5 bits (58), Expect = 9.8
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +2
Query: 341 LLAQLVKDSKHIVVHTGAG--ISTSAGIPD-FRGPNGVWTLEKEGK 469
++AQL K S+ + T G S +A IP+ P V T+EKEGK
Sbjct: 539 IVAQLNKKSEILANATAEGEAASEAAKIPEKLAPPENVETMEKEGK 584
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,960,922
Number of Sequences: 27780
Number of extensions: 377826
Number of successful extensions: 889
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 889
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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