Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0125
         (720 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    34   0.001
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    33   0.003
AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    33   0.003
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    25   0.62 
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    23   3.3  

>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 33.9 bits (74), Expect = 0.001
 Identities = 20/33 (60%), Positives = 21/33 (63%)
 Frame = +1

Query: 580 INEPTAAAIAYGL*TKKGTWRTKLYLSFDLRAG 678
           INEPTAAAIAYGL   K   R +  L FDL  G
Sbjct: 1   INEPTAAAIAYGL--DKKAERERNVLIFDLGGG 31


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 32.7 bits (71), Expect = 0.003
 Identities = 20/33 (60%), Positives = 22/33 (66%)
 Frame = +1

Query: 580 INEPTAAAIAYGL*TKKGTWRTKLYLSFDLRAG 678
           INEPTAAAIAYGL  KKG  +    L +DL  G
Sbjct: 1   INEPTAAAIAYGL-DKKGAEQN--ILVYDLGGG 30


>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 32.7 bits (71), Expect = 0.003
 Identities = 19/33 (57%), Positives = 21/33 (63%)
 Frame = +1

Query: 580 INEPTAAAIAYGL*TKKGTWRTKLYLSFDLRAG 678
           INEPTAAAIAYGL   K   + +  L FDL  G
Sbjct: 1   INEPTAAAIAYGL--DKKAEKERNVLIFDLGGG 31


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 25.0 bits (52), Expect = 0.62
 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 7/49 (14%)
 Frame = +1

Query: 421 FH-GAYENEGNCRSL---SWQNCA---ECSYHGSRVLNDSQRQGHKRCR 546
           FH GA+  EG C+S    ++ N +   EC  +G  V+N   R   K CR
Sbjct: 15  FHFGAFTCEG-CKSFFGRTYNNISSISECKNNGECVINKKNRTACKACR 62


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 122 LPAREGGDHRQRPGQQDH 175
           +P R+  DHR RP +  H
Sbjct: 246 IPIRQCDDHRDRPPRHFH 263


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,229
Number of Sequences: 336
Number of extensions: 3843
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)