Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0123
         (685 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    25   0.76 
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    25   0.76 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.1  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   9.4  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 24.6 bits (51), Expect = 0.76
 Identities = 11/41 (26%), Positives = 22/41 (53%)
 Frame = -1

Query: 583 FYM*YCFSWL*LSALLNIKSEKDSQF*LTLRLNIRHKYDIK 461
           FY+ +CF WL +   +  ++++ +    T    I +KY +K
Sbjct: 322 FYLCFCFYWLLVMVAMFSRTQQSANKTATFVHEIWNKYALK 362


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 24.6 bits (51), Expect = 0.76
 Identities = 11/41 (26%), Positives = 22/41 (53%)
 Frame = -1

Query: 583 FYM*YCFSWL*LSALLNIKSEKDSQF*LTLRLNIRHKYDIK 461
           FY+ +CF WL +   +  ++++ +    T    I +KY +K
Sbjct: 278 FYLCFCFYWLLVMVAMFSRTQQSANKTATFVHEIWNKYALK 318


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 157 II*MYEFLFILCIYFSIL 210
           II     LF+LCIY+ ++
Sbjct: 121 IIFTVHLLFLLCIYYFVV 138



 Score = 21.0 bits (42), Expect = 9.4
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = +1

Query: 169 YEFLFILCIYF 201
           Y F+ +LC+Y+
Sbjct: 105 YAFIILLCVYY 115


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -3

Query: 107 PYYFLIDLSLVIGLWL 60
           PY+  +D+ + + LWL
Sbjct: 427 PYFEKLDVKVTVQLWL 442


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,431
Number of Sequences: 336
Number of extensions: 2759
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)