Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0123
         (685 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF125447-2|AAD12808.1|  250|Caenorhabditis elegans Hypothetical ...    29   3.1  
AL021493-2|CAA16393.1|  382|Caenorhabditis elegans Hypothetical ...    28   7.1  
Z81044-1|CAB02810.1|  223|Caenorhabditis elegans Hypothetical pr...    27   9.4  

>AF125447-2|AAD12808.1|  250|Caenorhabditis elegans Hypothetical
           protein Y14H12B.1a protein.
          Length = 250

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 24/75 (32%), Positives = 35/75 (46%)
 Frame = -3

Query: 467 HQIYYTETGLDIHTTDSSILFLANIISVELLLSRSRRPTFSA*RMNKSIREYIH*SITY* 288
           H+++YT  GL  HT+ +  L  + I S  L LS    P  S+  +N S R     S+   
Sbjct: 35  HRVFYTSRGLQWHTSVAHKLDNSEIPSTRLQLSDDEAPP-SSPSLNLSTRSMRKRSVPI- 92

Query: 287 LINPLSSDTNGVVFS 243
              PL  D+  +V S
Sbjct: 93  ---PLPEDSKEMVAS 104


>AL021493-2|CAA16393.1|  382|Caenorhabditis elegans Hypothetical
           protein Y51A2B.2 protein.
          Length = 382

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +1

Query: 178 LFILCIYFSILRKVDESPSKQLLKTTPL 261
           +FILCIYF+I+ K+       L K   L
Sbjct: 268 IFILCIYFAIITKIVSMKGSTLSKNETL 295


>Z81044-1|CAB02810.1|  223|Caenorhabditis elegans Hypothetical
           protein C30H6.1 protein.
          Length = 223

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = +3

Query: 99  IVWKY*ASFTF*INANKSVDNIDV*IFIYIMYLFLNFEEGRRKSLQ 236
           +++ Y   FTF  N N  +DN+     +   YLF NF    R++L+
Sbjct: 9   VLFSYLYRFTFSANDNAKIDNL-----VARQYLFSNFVANNREALK 49


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,828,390
Number of Sequences: 27780
Number of extensions: 250168
Number of successful extensions: 492
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 492
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)