BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0122
(608 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A7QCV1 Cluster: Chromosome undetermined scaffold_79, wh... 36 0.75
UniRef50_Q600Y5 Cluster: ATP-binding protein; n=6; Mycoplasma hy... 33 4.0
UniRef50_A2DAG4 Cluster: Dynein heavy chain family protein; n=2;... 33 4.0
UniRef50_Q4UKP4 Cluster: Putative uncharacterized protein; n=1; ... 33 5.3
UniRef50_Q1LTE6 Cluster: DNA translocase ftsK; n=1; Baumannia ci... 33 5.3
UniRef50_Q00XR4 Cluster: Homology to unknown gene; n=2; Ostreoco... 33 5.3
UniRef50_Q7RLC7 Cluster: Putative uncharacterized protein PY0261... 33 5.3
UniRef50_Q59T51 Cluster: Putative uncharacterized protein SNP1; ... 33 5.3
UniRef50_UPI000023EAAE Cluster: hypothetical protein FG07531.1; ... 33 7.0
UniRef50_Q2J7A9 Cluster: Regulator of polyketide synthase expres... 33 7.0
UniRef50_Q2B8J8 Cluster: Putative uncharacterized protein; n=1; ... 33 7.0
UniRef50_Q5AGI4 Cluster: Putative uncharacterized protein; n=2; ... 33 7.0
UniRef50_Q8IIS9 Cluster: Putative uncharacterized protein; n=3; ... 32 9.3
UniRef50_Q23FG4 Cluster: Putative uncharacterized protein; n=1; ... 32 9.3
UniRef50_Q0UMH4 Cluster: Putative uncharacterized protein; n=1; ... 32 9.3
>UniRef50_A7QCV1 Cluster: Chromosome undetermined scaffold_79, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_79, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 485
Score = 35.9 bits (79), Expect = 0.75
Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Frame = +2
Query: 290 NNSTKDKNVISKYFTRAADESLEDFKETKRIITCPKIIKPARKQRNNGKRICKQKDIRTS 469
NN K+ I + SL + K K++ P+I K N KR+ QK I
Sbjct: 349 NNQMIHKSSIQIRSMNWTNYSLTEKKNKKKLFLTPEINISPNKASYNAKRLESQKSIWQI 408
Query: 470 LKRKNNELIEFSKNXI-MFARRQGIDV 547
LKR+N+ LI I F R ID+
Sbjct: 409 LKRRNSRLIRKLHYFIKFFIERIYIDI 435
>UniRef50_Q600Y5 Cluster: ATP-binding protein; n=6; Mycoplasma
hyopneumoniae|Rep: ATP-binding protein - Mycoplasma
hyopneumoniae (strain 232)
Length = 654
Score = 33.5 bits (73), Expect = 4.0
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = -2
Query: 436 FSIISLFPGRLYNFRAGNDSLSFFKIFKTLICCSREIFTYH---ILVFSAIITTITHSLF 266
F II L Y + + I K L + +IF YH I++ S I I +F
Sbjct: 531 FIIILLIQTVFYAKNLSDSKMKLIGILKALSAKTWQIFFYHWLNIIIISLFILFINSVVF 590
Query: 265 IRPMGRSYPSI 233
I MG+ Y SI
Sbjct: 591 IPSMGKIYTSI 601
>UniRef50_A2DAG4 Cluster: Dynein heavy chain family protein; n=2;
Trichomonas vaginalis G3|Rep: Dynein heavy chain family
protein - Trichomonas vaginalis G3
Length = 4100
Score = 33.5 bits (73), Expect = 4.0
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +2
Query: 401 IKPARKQRNNGKRICKQKDIRTSLKRKNNELIEFSKNXIMFARRQGIDVGFQNQLQL 571
I+P K+R+ K KQ++ +LK+K EL+E S+ + V Q +LQ+
Sbjct: 2884 IQPKIKRRDEAK--AKQEEAEINLKKKQEELVEISEKLAQLQQEYDNSVNEQKELQV 2938
>UniRef50_Q4UKP4 Cluster: Putative uncharacterized protein; n=1;
Rickettsia felis|Rep: Putative uncharacterized protein -
Rickettsia felis (Rickettsia azadi)
Length = 572
Score = 33.1 bits (72), Expect = 5.3
Identities = 21/67 (31%), Positives = 36/67 (53%)
Frame = +2
Query: 302 KDKNVISKYFTRAADESLEDFKETKRIITCPKIIKPARKQRNNGKRICKQKDIRTSLKRK 481
+ KN I + + D ++ D + K I +C PA K N K+ K++ ++LK K
Sbjct: 374 QQKNQIIELISSKID-NISDLRAIKVIESCNL---PAIKMVLNSKKKIAHKELESALKTK 429
Query: 482 NNELIEF 502
N+E+I+F
Sbjct: 430 NSEVIDF 436
>UniRef50_Q1LTE6 Cluster: DNA translocase ftsK; n=1; Baumannia
cicadellinicola str. Hc (Homalodisca coagulata)|Rep: DNA
translocase ftsK - Baumannia cicadellinicola subsp.
Homalodisca coagulata
Length = 666
Score = 33.1 bits (72), Expect = 5.3
Identities = 25/74 (33%), Positives = 41/74 (55%)
Frame = -2
Query: 502 KLN*LIILSF*RSPYVFLLADSFSIISLFPGRLYNFRAGNDSLSFFKIFKTLICCSREIF 323
K+N L+ ++F Y+ LL S S+++L+ LYNF +G FF TL+ +I
Sbjct: 102 KIN-LLTITFKFICYLILLFTSCSLVTLYIKNLYNFPSGGLIGYFFS--STLLHWFDKIQ 158
Query: 322 TYHILVFSAIITTI 281
T +L+ S II+ +
Sbjct: 159 TTKLLLISLIISIL 172
>UniRef50_Q00XR4 Cluster: Homology to unknown gene; n=2;
Ostreococcus|Rep: Homology to unknown gene -
Ostreococcus tauri
Length = 329
Score = 33.1 bits (72), Expect = 5.3
Identities = 28/78 (35%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +3
Query: 21 GTPAGKFGSAIAIGSLLIGAGCGFYFHNAS-ITQNLRRAAEKLYEDPIEEVERRLLIASG 197
GT A K+G+ + + H AS + LR A K YED +EE LL A G
Sbjct: 182 GTVAAKYGATLMRRLRADVERVAAWDHQASPVVDTLRHGAGKEYEDLLEE----LLRAEG 237
Query: 198 LPNRTGDQIRALIDGYER 251
+P T +RA DG+ R
Sbjct: 238 IPFVTERDLRA--DGHAR 253
>UniRef50_Q7RLC7 Cluster: Putative uncharacterized protein PY02619;
n=4; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY02619 - Plasmodium yoelii yoelii
Length = 1014
Score = 33.1 bits (72), Expect = 5.3
Identities = 25/79 (31%), Positives = 39/79 (49%)
Frame = +2
Query: 284 SSNNSTKDKNVISKYFTRAADESLEDFKETKRIITCPKIIKPARKQRNNGKRICKQKDIR 463
S N+ K KNVIS+ ++ + + L D K T I K N GKR K+ + +
Sbjct: 719 SEINTNKLKNVISEKYSNS--DFLNDINCNKYDDT--NISNCNVKHGNLGKRESKESNKK 774
Query: 464 TSLKRKNNELIEFSKNXIM 520
+ KRK +I+ KN ++
Sbjct: 775 LNRKRKEESIIDIRKNVVL 793
>UniRef50_Q59T51 Cluster: Putative uncharacterized protein SNP1;
n=2; Candida albicans|Rep: Putative uncharacterized
protein SNP1 - Candida albicans (Yeast)
Length = 305
Score = 33.1 bits (72), Expect = 5.3
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +2
Query: 308 KNVISKYFTRAADESLEDFKETKRIITCPKIIKPARKQRN-NGKRICKQKDIRTSLKRKN 484
KN I KY T E + + I+ KI+K +KQ N KR+ K+KD L+ N
Sbjct: 5 KNEIDKYLTSELPERESKAQAVPKKIS--KIVKHKQKQHEANLKRLAKEKDHERQLEEWN 62
Query: 485 NELIEFSKNXIMFAR 529
N + F+K F +
Sbjct: 63 NPTL-FAKQEREFMK 76
>UniRef50_UPI000023EAAE Cluster: hypothetical protein FG07531.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG07531.1 - Gibberella zeae PH-1
Length = 363
Score = 32.7 bits (71), Expect = 7.0
Identities = 20/87 (22%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 KPRKISGTPAGKFGSAIAIGSLLIGAGCGFY---FHNASITQNLRRAAEKLYEDPIEEVE 173
+P+ T G GS +G+++ G+ GF F + LR+ P++EV+
Sbjct: 225 EPKPTETTETGSGGSKTNVGAIVGGSIGGFLVLSFLVLGVLWVLRKNRRNENPPPVQEVQ 284
Query: 174 RRLLIASGLPNRTGDQIRALIDGYERP 254
++ +P GD + + Y +P
Sbjct: 285 PAVVPQHNIPQTPGDSVPPMNQNYPKP 311
>UniRef50_Q2J7A9 Cluster: Regulator of polyketide synthase
expression-like; n=5; Bacteria|Rep: Regulator of
polyketide synthase expression-like - Frankia sp.
(strain CcI3)
Length = 539
Score = 32.7 bits (71), Expect = 7.0
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +3
Query: 6 PRKISGTPAGKF-GSAIAIGSLLIGAGCGFYFHNASITQNLRRAAEKLYEDPIEEVERRL 182
P + +GTP + G+ + GS L Y H ++ LR+AAE DP + ER +
Sbjct: 461 PLRDAGTPLLETTGAYLDFGSSLEATARALYLHTNTVRYRLRKAAEVCGLDPADHRERFI 520
Query: 183 L 185
L
Sbjct: 521 L 521
>UniRef50_Q2B8J8 Cluster: Putative uncharacterized protein; n=1;
Bacillus sp. NRRL B-14911|Rep: Putative uncharacterized
protein - Bacillus sp. NRRL B-14911
Length = 325
Score = 32.7 bits (71), Expect = 7.0
Identities = 16/35 (45%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = +2
Query: 272 RMCDSSNNSTKDKNV-ISKYFTRAADESLEDFKET 373
+M DS +D+N+ IS++ RA +ESL+D KET
Sbjct: 290 KMLDSVKQLAEDENITISQWIERAIEESLQDKKET 324
>UniRef50_Q5AGI4 Cluster: Putative uncharacterized protein; n=2;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 197
Score = 32.7 bits (71), Expect = 7.0
Identities = 14/37 (37%), Positives = 25/37 (67%)
Frame = +2
Query: 374 KRIITCPKIIKPARKQRNNGKRICKQKDIRTSLKRKN 484
KRI+ +I++ R + KRI K+++++T +KRKN
Sbjct: 117 KRIMRKKRIMRKKRIMKRKRKRIMKKRNLKTMVKRKN 153
>UniRef50_Q8IIS9 Cluster: Putative uncharacterized protein; n=3;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 3334
Score = 32.3 bits (70), Expect = 9.3
Identities = 15/53 (28%), Positives = 29/53 (54%)
Frame = +2
Query: 353 LEDFKETKRIITCPKIIKPARKQRNNGKRICKQKDIRTSLKRKNNELIEFSKN 511
+++ K+ IITC K I KQ + ++ K+K+ + + KN++ + KN
Sbjct: 2197 VDEEKKMDEIITCEKNISNENKQSGDNNKLEKEKNDKNEIYEKNDKNEIYEKN 2249
>UniRef50_Q23FG4 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 958
Score = 32.3 bits (70), Expect = 9.3
Identities = 19/64 (29%), Positives = 35/64 (54%)
Frame = +2
Query: 308 KNVISKYFTRAADESLEDFKETKRIITCPKIIKPARKQRNNGKRICKQKDIRTSLKRKNN 487
KN I + + D+ +E+ K+ + ++ +IK K+ + K CK+ +I S +K+
Sbjct: 645 KNEIIRLKEKIEDKEIENKKQYQMLLEQRNLIKKQEKEIEDLKTKCKEFEIGYSNVQKDV 704
Query: 488 ELIE 499
ELIE
Sbjct: 705 ELIE 708
>UniRef50_Q0UMH4 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 604
Score = 32.3 bits (70), Expect = 9.3
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +3
Query: 102 NASITQNLRRAAEKLYEDPIEEVERRLLIASGLPN 206
N S+ Q ++ + +L+ D +EEV R+ L+ SG PN
Sbjct: 467 NISLVQLIKALSLRLWPDEMEEVMRKELVKSGTPN 501
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 537,381,180
Number of Sequences: 1657284
Number of extensions: 10013052
Number of successful extensions: 30242
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 29276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30227
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43562448615
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -