Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0122
         (608 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    25   0.66 
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    25   0.66 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   0.87 
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    22   3.5  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   6.1  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   6.1  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 24.6 bits (51), Expect = 0.66
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -2

Query: 427  ISLFPGRLYNFRAGNDSLSFFKIFKTLICCSREIFTYHILVFS 299
            I +F  ++ N RAG  +  FF I  T    S +I   H++  S
Sbjct: 957  IEMFSLQILNERAGFTAAGFFPIDYTSAFSSEKIVWLHLVYIS 999



 Score = 22.6 bits (46), Expect = 2.7
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = -2

Query: 427 ISLFPGRLYNFRAGNDSLSFFKIFKTLICCSREIFTYHI 311
           I +F  ++ N RAG  +  FF I  +L+    ++  + I
Sbjct: 681 IEMFSLQILNERAGFSAAGFFPIDYSLVFSETKLLLFKI 719


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 24.6 bits (51), Expect = 0.66
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = -2

Query: 196 PLAINNLLSTSSMGSSYNFSAA 131
           P++INN  STSS  SS + +AA
Sbjct: 158 PVSINNNTSTSSSASSPSVTAA 179


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.2 bits (50), Expect = 0.87
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -2

Query: 370 FFKIFKTLICCSREIFTYHILVFSAI 293
           +F     L CC+  IFT H+L    I
Sbjct: 260 YFYYMHLLFCCAFIIFTMHLLFLLCI 285



 Score = 22.6 bits (46), Expect = 2.7
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -2

Query: 340 CSREIFTYHILVFSAIITTITHSLFI 263
           C+  IFT H+L   A I    H LF+
Sbjct: 171 CAFIIFTMHLLFCCAFIFFNMHLLFL 196



 Score = 21.8 bits (44), Expect = 4.6
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = -2

Query: 349 LICCSREIFTYHILVFSAIITTITHSLFI 263
           L CC+   F  H+L    +     H LF+
Sbjct: 181 LFCCAFIFFNMHLLFLLCLDYFTLHLLFL 209



 Score = 21.4 bits (43), Expect = 6.1
 Identities = 10/35 (28%), Positives = 15/35 (42%)
 Frame = -2

Query: 367 FKIFKTLICCSREIFTYHILVFSAIITTITHSLFI 263
           F +   L+ C    +  H+L   A I    H LF+
Sbjct: 248 FTVHLLLLVCIYYFYYMHLLFCCAFIIFTMHLLFL 282



 Score = 21.0 bits (42), Expect = 8.1
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -3

Query: 453 FCLQILFPLFLCFLAGFIILGQVMI 379
           FC  I+F + L F   FI     ++
Sbjct: 170 FCAFIIFTMHLLFCCAFIFFNMHLL 194


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -3

Query: 165 LLWDPHIIFLQLDEDSVL 112
           LLW P +IF+ L ++ ++
Sbjct: 118 LLWTPAVIFVVLSKNGIV 135


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -2

Query: 454 FLLADSFSIISLFPGRLYNFRAGNDSLS 371
           F+      + ++ PGR Y FR  N   S
Sbjct: 327 FMTNTPLEVFTITPGRRYRFRMINSFAS 354


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -2

Query: 454 FLLADSFSIISLFPGRLYNFRAGNDSLS 371
           F+      + ++ PGR Y FR  N   S
Sbjct: 327 FMTNTPLEVFTITPGRRYRFRMINSFAS 354


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,755
Number of Sequences: 336
Number of extensions: 2644
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)