Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0122
(608 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_58585| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.97
SB_22167| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_20372| Best HMM Match : IBR (HMM E-Value=5.4e-08) 30 1.7
SB_38691| Best HMM Match : UPF0014 (HMM E-Value=2.2) 29 2.2
SB_56230| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_27468| Best HMM Match : Peptidase_C48 (HMM E-Value=0.0026) 29 2.9
SB_41093| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_26181| Best HMM Match : DUF963 (HMM E-Value=0.00098) 28 5.1
SB_1787| Best HMM Match : Peptidase_S9 (HMM E-Value=1.5e-08) 28 6.8
>SB_58585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 30.7 bits (66), Expect = 0.97
Identities = 20/80 (25%), Positives = 42/80 (52%)
Frame = +2
Query: 254 HRPDK*RMCDSSNNSTKDKNVISKYFTRAADESLEDFKETKRIITCPKIIKPARKQRNNG 433
HR R N S+KDK++I + T DE++++ K + + K+ + K +G
Sbjct: 3 HRNPVYRGGSMKNLSSKDKDIILRQKTEELDEAMQEMKRLEMQVKTQKVSETLSK---SG 59
Query: 434 KRICKQKDIRTSLKRKNNEL 493
+ +Q++I ++K+ ++L
Sbjct: 60 CFV-EQQEILNNMKKTGDDL 78
>SB_22167| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1612
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = +2
Query: 284 SSNNSTKDKNVISKYFTRAADESLEDFKETKRIITCPKIIKPARKQRNNGKRICKQKD 457
+SN K V+S R +SL D ++ KR+ + + KPA KQ N KR +++
Sbjct: 928 ASNRQRKSGTVLSMLNLRVVLDSL-DSRKYKRLASVSGLAKPASKQPNLYKRQSNEEE 984
>SB_20372| Best HMM Match : IBR (HMM E-Value=5.4e-08)
Length = 341
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +2
Query: 278 CDSSNNSTKDKNVISKYFTRAADESLEDFKETKRIITCPKIIKPARKQR-NNGKRIC-KQ 451
CD + + + S+ R ++ D ++ I TCP + R++ +R+ KQ
Sbjct: 79 CDRILLEDEIQTIASEEIWRKYEKFKTDIEQNPNIKTCPNCSRIYRREPVKQDERVNEKQ 138
Query: 452 KDIRTSLKRKNNE 490
+ +T K KNNE
Sbjct: 139 TETKTKTKEKNNE 151
>SB_38691| Best HMM Match : UPF0014 (HMM E-Value=2.2)
Length = 430
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/35 (37%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
Frame = -3
Query: 207 YLVGRWLSI---ISFPPLLWDPHIIFLQLDEDSVL 112
+LVG+W+++ S PLL++ ++ +Q DED V+
Sbjct: 334 WLVGQWVNVKLTASVRPLLYESLLLLMQKDEDLVM 368
>SB_56230| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 996
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/56 (23%), Positives = 28/56 (50%)
Frame = -2
Query: 409 RLYNFRAGNDSLSFFKIFKTLICCSREIFTYHILVFSAIITTITHSLFIRPMGRSY 242
R YN R ++ F + +TL+C + + + + + + ++ + +SL IR Y
Sbjct: 861 RQYNHRKPMNTFKFCLVRRTLVCPVQYLVIFTVFLINWLVPDVPYSLEIRMKHEKY 916
>SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/56 (23%), Positives = 30/56 (53%)
Frame = +2
Query: 314 VISKYFTRAADESLEDFKETKRIITCPKIIKPARKQRNNGKRICKQKDIRTSLKRK 481
++++ TRAA++ + KE + + K + +K ++ ++KD ++KRK
Sbjct: 25 IVNERRTRAAEKEMSQMKEGEELAEKKKASRTEKKATKKQEKKAEKKDKAQTMKRK 80
>SB_27468| Best HMM Match : Peptidase_C48 (HMM E-Value=0.0026)
Length = 766
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +2
Query: 350 SLEDFKETKRIITCPKIIKPARKQRNNGKRICKQKDIR---TSLKRKN 484
S +E + IITC K K +R + N+G+ + + R TS K+KN
Sbjct: 575 SFSSVEEAESIITCVKPFKDSRTRCNSGEPSASRYNTRSNDTSAKQKN 622
>SB_41093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 586
Score = 28.3 bits (60), Expect = 5.1
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +2
Query: 338 AADESLEDFKETKRIITCPKIIKPARKQRNNGK--RICKQKDIRTSLK 475
+ +ES KE + + P IKPA KQR + K R CK+K + LK
Sbjct: 501 SGEESENADKENQEV---PSAIKPAPKQRPSAKETRKCKRKALGKPLK 545
>SB_26181| Best HMM Match : DUF963 (HMM E-Value=0.00098)
Length = 620
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = -2
Query: 466 SPYVFLLADSFSIISLFPGRLYNFRAGNDSLSFFKIFKTLICC 338
SPY +L+ +++ FP L+ G S + K F I C
Sbjct: 366 SPYYYLVRKYLVLLTCFPSALHPLCYGTMSRFYAKAFSAFILC 408
>SB_1787| Best HMM Match : Peptidase_S9 (HMM E-Value=1.5e-08)
Length = 1057
Score = 27.9 bits (59), Expect = 6.8
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3
Query: 102 NASITQNLRRAAEKLYEDPIEEVERRL-LIASGLPNRTGDQIRAL 233
NA + +NLR A EKL E E+++ L + SG N + +Q+R L
Sbjct: 728 NAQLRRNLRMANEKLQEQ--REIQQSLEELKSGHTNVSFEQVRQL 770
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,511,831
Number of Sequences: 59808
Number of extensions: 315196
Number of successful extensions: 774
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 774
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1487884875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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