Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0121
         (599 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132876-1|CAB60842.2|  132|Caenorhabditis elegans Hypothetical ...    52   3e-07
Z82264-6|CAB05157.1|  214|Caenorhabditis elegans Hypothetical pr...    31   0.83 
AF125955-4|AAO12428.1|  181|Caenorhabditis elegans Hypothetical ...    29   2.5  
AF125955-3|AAD14720.1|  336|Caenorhabditis elegans Hypothetical ...    29   2.5  
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p...    28   4.4  
Z96047-8|CAC42278.1|  507|Caenorhabditis elegans Hypothetical pr...    27   7.7  
Z96047-7|CAB09413.1|  561|Caenorhabditis elegans Hypothetical pr...    27   7.7  
Z81492-3|CAB04030.1|  382|Caenorhabditis elegans Hypothetical pr...    27   7.7  

>AL132876-1|CAB60842.2|  132|Caenorhabditis elegans Hypothetical
           protein Y105E8A.1 protein.
          Length = 132

 Score = 52.0 bits (119), Expect = 3e-07
 Identities = 23/53 (43%), Positives = 33/53 (62%)
 Frame = +2

Query: 86  VKIYISGISGNKEVKKRQQRVLMILDSKNIKYEVIDITEPGRESDKDFMQNNA 244
           +K+Y++  + N E K R QR LMILD   I ++ IDIT+P     + FM+ NA
Sbjct: 4   LKVYVASATANPETKYRVQRTLMILDGLGIPFDSIDITKPEHAEQRRFMRENA 56



 Score = 48.4 bits (110), Expect = 4e-06
 Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
 Frame = +1

Query: 229 HAKQC*IFCGTVSDPNPRSP-LPPQMFNDEEYCGDYDQFDLANEVDTLEQFLKL 387
           HA+Q        S   P    LPPQ F ++EY GDY+ FD + E DT+ +FL+L
Sbjct: 45  HAEQRRFMRENASKKGPNGAVLPPQFFYEDEYLGDYEDFDTSVEADTITEFLRL 98


>Z82264-6|CAB05157.1|  214|Caenorhabditis elegans Hypothetical
           protein C49C3.12 protein.
          Length = 214

 Score = 30.7 bits (66), Expect = 0.83
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = +2

Query: 95  YISGISGNKEVKKRQQRVLMILDSKNIK 178
           ++SGI  N E +  +++ L ILD KNIK
Sbjct: 56  HLSGIESNSEKRYVEEQTLSILDDKNIK 83


>AF125955-4|AAO12428.1|  181|Caenorhabditis elegans Hypothetical
           protein F46E10.10c protein.
          Length = 181

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 76  KHGCQNLYQWHFWQQGGEETSAAGPDD 156
           K  C +++ WHF  + G+  S A P D
Sbjct: 94  KAACDHIHDWHFGTKAGQFVSMAVPSD 120


>AF125955-3|AAD14720.1|  336|Caenorhabditis elegans Hypothetical
           protein F46E10.10a protein.
          Length = 336

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 76  KHGCQNLYQWHFWQQGGEETSAAGPDD 156
           K  C +++ WHF  + G+  S A P D
Sbjct: 249 KAACDHIHDWHFGTKAGQFVSMAVPSD 275


>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
           protein T19D12.1 protein.
          Length = 1844

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
 Frame = +2

Query: 59  LKNTLSNMVVKIYISGISGNKEVKKR--QQRVLMILDSKNIKYEVIDITEPGRESDKDFM 232
           L+    N VV I    IS   ++ +    + V  ++ S N  Y   D+T   +  DK  +
Sbjct: 133 LRQGSDNSVVAIGNGAISSTSDLGQMPTDKNVNSVITSDNTTYS--DVTTAPQACDKTII 190

Query: 233 QNNAKSSVAP 262
           Q++  S+VAP
Sbjct: 191 QSDCPSTVAP 200


>Z96047-8|CAC42278.1|  507|Caenorhabditis elegans Hypothetical
           protein DY3.4b protein.
          Length = 507

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +1

Query: 43  LSFYHFEKYLIKHGCQNLYQW 105
           +S +H EKY+    C N+ +W
Sbjct: 69  ISMFHLEKYIGSTNCANILEW 89


>Z96047-7|CAB09413.1|  561|Caenorhabditis elegans Hypothetical
           protein DY3.4a protein.
          Length = 561

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +1

Query: 43  LSFYHFEKYLIKHGCQNLYQW 105
           +S +H EKY+    C N+ +W
Sbjct: 123 ISMFHLEKYIGSTNCANILEW 143


>Z81492-3|CAB04030.1|  382|Caenorhabditis elegans Hypothetical
           protein E03H4.6 protein.
          Length = 382

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +2

Query: 101 SGISGNKEVKKRQQRVLMILDSKNIKYEVIDITE 202
           S +S NKE +K   ++L I   + +KY +  IT+
Sbjct: 178 SSMSPNKEAEKDVSKILKISHGRLLKYYIYQITQ 211


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,439,960
Number of Sequences: 27780
Number of extensions: 188071
Number of successful extensions: 517
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 517
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)