Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0117
(691 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q94522 Cluster: Succinyl-CoA ligase [GDP-forming] subun... 149 5e-35
UniRef50_P53597 Cluster: Succinyl-CoA ligase [GDP-forming] subun... 148 1e-34
UniRef50_A5ATZ1 Cluster: Putative uncharacterized protein; n=2; ... 113 3e-24
UniRef50_P45102 Cluster: Succinyl-CoA ligase [ADP-forming] subun... 110 3e-23
UniRef50_Q9AKE1 Cluster: Succinyl-CoA ligase [ADP-forming] subun... 110 4e-23
UniRef50_P53400 Cluster: Succinyl-CoA ligase [GDP-forming] subun... 96 6e-19
UniRef50_O28733 Cluster: Succinyl-CoA ligase [ADP-forming] subun... 93 4e-18
UniRef50_A6DYT9 Cluster: Succinyl-CoA synthetase, alpha subunit;... 91 2e-17
UniRef50_A6RFY2 Cluster: Putative uncharacterized protein; n=1; ... 90 4e-17
UniRef50_UPI000023F548 Cluster: hypothetical protein FG11485.1; ... 90 5e-17
UniRef50_Q4PDB0 Cluster: Putative uncharacterized protein; n=1; ... 86 9e-16
UniRef50_A2QQL8 Cluster: Contig An08c0100, complete genome; n=3;... 84 3e-15
UniRef50_Q2U2T2 Cluster: Succinyl-CoA synthetase; n=10; Ascomyco... 83 8e-15
UniRef50_Q8A9M8 Cluster: Succinyl-CoA ligase [ADP-forming] subun... 82 1e-14
UniRef50_Q9YD40 Cluster: Succinyl-CoA synthetase alpha chain; n=... 80 4e-14
UniRef50_UPI000023DDE4 Cluster: hypothetical protein FG07898.1; ... 78 2e-13
UniRef50_Q58643 Cluster: Succinyl-CoA ligase [ADP-forming] subun... 77 5e-13
UniRef50_Q7SDJ1 Cluster: Putative uncharacterized protein NCU098... 76 7e-13
UniRef50_Q2V0P6 Cluster: Succinyl-CoA ligase [ADP-forming] subun... 75 1e-12
UniRef50_Q18XG5 Cluster: Succinyl-CoA ligase [ADP-forming] subun... 72 1e-11
UniRef50_O26663 Cluster: Succinyl-CoA ligase [ADP-forming] subun... 72 2e-11
UniRef50_Q7U0Z0 Cluster: Succinyl-CoA ligase [ADP-forming] subun... 71 2e-11
UniRef50_Q07LP7 Cluster: Succinyl-CoA synthetase, alpha subunit;... 70 5e-11
UniRef50_A7I683 Cluster: Succinyl-CoA synthetase, alpha subunit;... 70 5e-11
UniRef50_Q2RLF6 Cluster: CoA-binding; n=3; Clostridia|Rep: CoA-b... 62 2e-08
UniRef50_Q18UM7 Cluster: CoA-binding; n=2; Desulfitobacterium ha... 59 9e-08
UniRef50_A7HMU3 Cluster: CoA-binding domain protein; n=2; Thermo... 56 1e-06
UniRef50_A7DNB4 Cluster: CoA-binding domain protein; n=1; Candid... 55 1e-06
UniRef50_Q6LYN5 Cluster: Succinate--CoA ligase (ADP-forming); al... 53 8e-06
UniRef50_A0RTT7 Cluster: Succinyl-CoA synthetase, alpha subunit;... 53 8e-06
UniRef50_O67729 Cluster: Succinyl-CoA ligase alpha subunit; n=4;... 52 2e-05
UniRef50_Q05FP1 Cluster: Succinyl-CoA synthetase alpha subunit; ... 48 2e-04
UniRef50_A7ENF5 Cluster: Putative uncharacterized protein; n=1; ... 44 0.005
UniRef50_Q8YQC0 Cluster: Succinyl-CoA synthetase alpha chain; n=... 43 0.008
UniRef50_P74286 Cluster: Succinyl-CoA synthetase; n=3; Chroococc... 38 0.18
UniRef50_A5C1W8 Cluster: Putative uncharacterized protein; n=1; ... 34 2.9
UniRef50_A0LDT0 Cluster: CoA-binding domain protein; n=4; Proteo... 33 5.0
UniRef50_A6PEV1 Cluster: Binding-protein-dependent transport sys... 33 8.7
UniRef50_A0QKT7 Cluster: Ftsk/spoiiie family protein; n=2; Mycob... 33 8.7
>UniRef50_Q94522 Cluster: Succinyl-CoA ligase [GDP-forming] subunit
alpha, mitochondrial precursor; n=81; cellular
organisms|Rep: Succinyl-CoA ligase [GDP-forming] subunit
alpha, mitochondrial precursor - Drosophila melanogaster
(Fruit fly)
Length = 328
Score = 149 bits (362), Expect = 5e-35
Identities = 70/113 (61%), Positives = 80/113 (70%)
Frame = +2
Query: 218 CSGFHWKAGYLPRQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASVIY 397
C GF K G QQAL+YGTK+VGG+SPKK GT+HLG PVF +V EAK T A+VIY
Sbjct: 42 CQGFTGKQGTFHSQQALEYGTKLVGGISPKKGGTQHLGLPVFASVAEAKKATDPHATVIY 101
Query: 398 VPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKMPFLRQNKSRLVGPNC 556
VPPPG +PLIVCITEGVPQHDMV+VK + Q+KSRLVGPNC
Sbjct: 102 VPPPGAAAAIIEALEAEIPLIVCITEGVPQHDMVKVKHALISQSKSRLVGPNC 154
Score = 65.7 bits (153), Expect = 1e-09
Identities = 57/173 (32%), Positives = 80/173 (46%), Gaps = 2/173 (1%)
Frame = +3
Query: 87 MAMPVRVLSKFKDGLKLGNVRFASGNPYAETRKNLILTSETKVIVQGFTGKQGTFHANKP 266
MA +R L K +DG G VR S Y +TR NL L +++VI QGFTGKQGTFH+ +
Sbjct: 1 MAASMRALLKVRDGFVAG-VRCNS--QYNKTRGNLKLNGDSRVICQGFTGKQGTFHSQQA 57
Query: 267 LTMVLKLLEECHQRRLVQNILVSLCLVQSKRQRQAQXXXXXXXXXXXXXXXXPF*KLLRL 446
L KL+ ++ L ++A + L
Sbjct: 58 LEYGTKLVGGISPKKGGTQHLGLPVFASVAEAKKATDPHATVIYVPPPGAAAAIIEALEA 117
Query: 447 KCPSL-CALQKV-CHNMIWCE*KCPS*DKTSLDWLVLTVPGIIAPEKCKIGIM 599
+ P + C + V H+M+ + S K+ L + PGIIAPE+CKIGIM
Sbjct: 118 EIPLIVCITEGVPQHDMVKVKHALISQSKSRL--VGPNCPGIIAPEQCKIGIM 168
>UniRef50_P53597 Cluster: Succinyl-CoA ligase [GDP-forming] subunit
alpha, mitochondrial precursor; n=313; cellular
organisms|Rep: Succinyl-CoA ligase [GDP-forming] subunit
alpha, mitochondrial precursor - Homo sapiens (Human)
Length = 333
Score = 148 bits (358), Expect = 1e-34
Identities = 72/119 (60%), Positives = 80/119 (67%)
Frame = +2
Query: 200 K*NKSDCSGFHWKAGYLPRQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGA 379
K K C GF K G QQAL+YGTK+VGG +P K G HLG PVF TVKEAK TGA
Sbjct: 41 KNTKIICQGFTGKQGTFHSQQALEYGTKLVGGTTPGKGGQTHLGLPVFNTVKEAKEQTGA 100
Query: 380 TASVIYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKMPFLRQNKSRLVGPNC 556
TASVIYVPPP +PL+VCITEG+PQ DMVRVK LRQ K+RL+GPNC
Sbjct: 101 TASVIYVPPPFAAAAINEAIEAEIPLVVCITEGIPQQDMVRVKHKLLRQEKTRLIGPNC 159
Score = 48.4 bits (110), Expect = 2e-04
Identities = 40/146 (27%), Positives = 64/146 (43%), Gaps = 2/146 (1%)
Frame = +3
Query: 168 YAETRKNLILTSETKVIVQGFTGKQGTFHANKPLTMVLKLLEECHQRRLVQNILVSLCLV 347
Y +R++L + TK+I QGFTGKQGTFH+ + L KL+ + Q L
Sbjct: 30 YTASRQHLYVDKNTKIICQGFTGKQGTFHSQQALEYGTKLVGGTTPGKGGQTHLGLPVFN 89
Query: 348 QSKRQRQAQXXXXXXXXXXXXXXXXPF*KLLRLKCP-SLCALQKV-CHNMIWCE*KCPS* 521
K ++ + + + P +C + + +M+ + K
Sbjct: 90 TVKEAKEQTGATASVIYVPPPFAAAAINEAIEAEIPLVVCITEGIPQQDMVRVKHKLLRQ 149
Query: 522 DKTSLDWLVLTVPGIIAPEKCKIGIM 599
+KT L + PG+I P +CKIGIM
Sbjct: 150 EKTRL--IGPNCPGVINPGECKIGIM 173
>UniRef50_A5ATZ1 Cluster: Putative uncharacterized protein; n=2;
cellular organisms|Rep: Putative uncharacterized protein
- Vitis vinifera (Grape)
Length = 468
Score = 113 bits (273), Expect = 3e-24
Identities = 53/93 (56%), Positives = 62/93 (66%)
Frame = +2
Query: 218 CSGFHWKAGYLPRQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASVIY 397
C G K G +QA++YGTK+VGGV+PKK G EHLG P+F TV EAKA T A ASVIY
Sbjct: 45 CQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGMEHLGLPIFNTVAEAKAETRANASVIY 104
Query: 398 VPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDM 496
VPPP + L+VCITEG+PQHDM
Sbjct: 105 VPPPFAAAAIMEAVEAELDLVVCITEGIPQHDM 137
Score = 32.7 bits (71), Expect = 8.7
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 189 LILTSETKVIVQGFTGKQGTFHANKPLTMVLKLL 290
+ + T+VI QG TGK GTFH + + K++
Sbjct: 35 VFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMV 68
>UniRef50_P45102 Cluster: Succinyl-CoA ligase [ADP-forming] subunit
alpha; n=125; Bacteria|Rep: Succinyl-CoA ligase
[ADP-forming] subunit alpha - Haemophilus influenzae
Length = 293
Score = 110 bits (265), Expect = 3e-23
Identities = 58/119 (48%), Positives = 70/119 (58%)
Frame = +2
Query: 200 K*NKSDCSGFHWKAGYLPRQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGA 379
K K C GF G +QAL YGT++VGGVSP K GT HLG PVF TV+EA TG
Sbjct: 7 KNTKVICQGFTGGQGTFHSEQALAYGTQLVGGVSPNKGGTTHLGLPVFNTVREAVENTGV 66
Query: 380 TASVIYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKMPFLRQNKSRLVGPNC 556
TA+VIYVP + LIVCITEG+P DM++VK L + ++GPNC
Sbjct: 67 TATVIYVPASFCKDAIIEAIDAGIQLIVCITEGIPTLDMLKVKQK-LNETGVVMIGPNC 124
Score = 37.9 bits (84), Expect = 0.23
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +3
Query: 189 LILTSETKVIVQGFTGKQGTFHANKPLTMVLKLL 290
+++ TKVI QGFTG QGTFH+ + L +L+
Sbjct: 3 ILIDKNTKVICQGFTGGQGTFHSEQALAYGTQLV 36
>UniRef50_Q9AKE1 Cluster: Succinyl-CoA ligase [ADP-forming] subunit
alpha; n=29; cellular organisms|Rep: Succinyl-CoA ligase
[ADP-forming] subunit alpha - Rickettsia typhi
Length = 292
Score = 110 bits (264), Expect = 4e-23
Identities = 57/119 (47%), Positives = 71/119 (59%)
Frame = +2
Query: 200 K*NKSDCSGFHWKAGYLPRQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGA 379
K K C GF G +QA+ YGT +VGGV+P K G HL PV+ TV EAKA T A
Sbjct: 7 KKTKVICQGFTGSQGTFHSEQAIAYGTNMVGGVTPGKGGHTHLNLPVYNTVHEAKAKTDA 66
Query: 380 TASVIYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKMPFLRQNKSRLVGPNC 556
ASVIYVPP + ++VCITEG+P DMV+VK + +K+RL+GPNC
Sbjct: 67 NASVIYVPPGFAADSILEAIDAKIEVVVCITEGIPVLDMVKVKRALI-GSKTRLIGPNC 124
Score = 38.3 bits (85), Expect = 0.18
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +3
Query: 189 LILTSETKVIVQGFTGKQGTFHANKPL 269
+++ +TKVI QGFTG QGTFH+ + +
Sbjct: 3 ILINKKTKVICQGFTGSQGTFHSEQAI 29
>UniRef50_P53400 Cluster: Succinyl-CoA ligase [GDP-forming] subunit
alpha-2, mitochondrial precursor; n=34; cellular
organisms|Rep: Succinyl-CoA ligase [GDP-forming] subunit
alpha-2, mitochondrial precursor - Trichomonas vaginalis
Length = 309
Score = 96.3 bits (229), Expect = 6e-19
Identities = 46/96 (47%), Positives = 60/96 (62%)
Frame = +2
Query: 269 DYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVPPPGXXXXXXXXXXXX 448
+YGTKVVG V PKKAG G P+F +KE T A AS+I+VP PG
Sbjct: 41 EYGTKVVGAVHPKKAGKIIAGLPIFKNMKEVVKRTDANASLIFVPAPGAAAACIEAAEAG 100
Query: 449 MPLIVCITEGVPQHDMVRVKMPFLRQNKSRLVGPNC 556
M L+VCITE +PQHDM++VK +++ +L+GPNC
Sbjct: 101 MGLVVCITEHIPQHDMIKVK-KVMKETGCQLIGPNC 135
>UniRef50_O28733 Cluster: Succinyl-CoA ligase [ADP-forming] subunit
alpha 1; n=72; cellular organisms|Rep: Succinyl-CoA
ligase [ADP-forming] subunit alpha 1 - Archaeoglobus
fulgidus
Length = 291
Score = 93.5 bits (222), Expect = 4e-18
Identities = 48/105 (45%), Positives = 64/105 (60%)
Frame = +2
Query: 242 GYLPRQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVPPPGXXX 421
G ++ LDYGTKVVGGV+P K G+E G PV+ TV+EA A T A S+IYVP
Sbjct: 24 GSFQAKRMLDYGTKVVGGVTPGKGGSEVHGIPVYNTVEEAVAETNADTSIIYVPARFATD 83
Query: 422 XXXXXXXXXMPLIVCITEGVPQHDMVRVKMPFLRQNKSRLVGPNC 556
+ L+VC+TEG+P +D + + LR+ KS L+GPNC
Sbjct: 84 AIFEAFDAGLRLVVCVTEGIPLYDEMLIHRK-LREVKSMLLGPNC 127
>UniRef50_A6DYT9 Cluster: Succinyl-CoA synthetase, alpha subunit;
n=2; Roseovarius|Rep: Succinyl-CoA synthetase, alpha
subunit - Roseovarius sp. TM1035
Length = 299
Score = 91.5 bits (217), Expect = 2e-17
Identities = 47/110 (42%), Positives = 61/110 (55%)
Frame = +2
Query: 224 GFHWKAGYLPRQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVP 403
G ++G +A+ YGT VGGV P K G HLG P+F TV+EA T A AS++ VP
Sbjct: 15 GMTGRSGTFYTDEAMRYGTTCVGGVRPGKGGARHLGLPLFNTVREAVEATQANASLVIVP 74
Query: 404 PPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKMPFLRQNKSRLVGPN 553
P + ++VC+TE VPQHDM RVK L + L+GPN
Sbjct: 75 APQAGPAMIEAIEAGVSVVVCVTERVPQHDMSRVKQA-LAGTDTILIGPN 123
Score = 33.9 bits (74), Expect = 3.8
Identities = 12/27 (44%), Positives = 21/27 (77%)
Frame = +3
Query: 189 LILTSETKVIVQGFTGKQGTFHANKPL 269
+ + SET++IVQG TG+ GTF+ ++ +
Sbjct: 3 IFVNSETRLIVQGMTGRSGTFYTDEAM 29
>UniRef50_A6RFY2 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative
uncharacterized protein - Ajellomyces capsulatus NAm1
Length = 138
Score = 90.2 bits (214), Expect = 4e-17
Identities = 44/80 (55%), Positives = 51/80 (63%)
Frame = +2
Query: 224 GFHWKAGYLPRQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVP 403
GF K G QQA+DYGT VVGG +PKKAG HLGKPVF TV++A TGATAS I+VP
Sbjct: 49 GFTGKQGTFHAQQAIDYGTNVVGGTNPKKAGQTHLGKPVFATVRDAVKETGATASAIFVP 108
Query: 404 PPGXXXXXXXXXXXXMPLIV 463
PP +PL+V
Sbjct: 109 PPLAAKSIEEAIESEVPLVV 128
Score = 50.0 bits (114), Expect = 5e-05
Identities = 22/34 (64%), Positives = 26/34 (76%)
Frame = +3
Query: 168 YAETRKNLILTSETKVIVQGFTGKQGTFHANKPL 269
YA T NL + S+TKVI QGFTGKQGTFHA + +
Sbjct: 30 YAATADNLRINSDTKVIYQGFTGKQGTFHAQQAI 63
>UniRef50_UPI000023F548 Cluster: hypothetical protein FG11485.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG11485.1 - Gibberella zeae PH-1
Length = 320
Score = 89.8 bits (213), Expect = 5e-17
Identities = 48/110 (43%), Positives = 60/110 (54%)
Frame = +2
Query: 224 GFHWKAGYLPRQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVP 403
GF K + A+ YGT +VGGVSPKK GT +L PVF TV+ A AS+++VP
Sbjct: 55 GFTGKTATNNARDAIAYGTNIVGGVSPKKGGTTNLDLPVFATVRGAAQSVRPNASLVHVP 114
Query: 404 PPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKMPFLRQNKSRLVGPN 553
+PLIV I E +P HDM+RV Q+KSRL GPN
Sbjct: 115 ASFAAGAIEEAIEAEIPLIVAIVEHIPVHDMLRVHEILRTQSKSRLKGPN 164
>UniRef50_Q4PDB0 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 357
Score = 85.8 bits (203), Expect = 9e-16
Identities = 48/112 (42%), Positives = 64/112 (57%), Gaps = 2/112 (1%)
Frame = +2
Query: 224 GFHWKAGYLPRQQALDYGTKVVGGVSPKKAGTEHL-GKPVFGTVKEA-KAGTGATASVIY 397
GF KA + Q +LD GT VVGGV+P K G++HL G+PVF ++K+ AG A+ ++
Sbjct: 61 GFTGKASTVHTQISLDMGTNVVGGVAPGKGGSKHLGGRPVFNSIKQVLDAGIRVDATSVF 120
Query: 398 VPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKMPFLRQNKSRLVGPN 553
VPP +PLIV + EGVP D RV Q+KSRL+G N
Sbjct: 121 VPPALAADAIIEAINAEIPLIVSVAEGVPVKDQFRVMEALHSQSKSRLLGAN 172
Score = 34.3 bits (75), Expect = 2.9
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = +3
Query: 168 YAETRKNLILTSETKVIVQGFTGKQGTFHANKPLTM 275
Y+ T NL + VIVQGFTGK T H L M
Sbjct: 42 YSNTIPNLAAGPHSNVIVQGFTGKASTVHTQISLDM 77
>UniRef50_A2QQL8 Cluster: Contig An08c0100, complete genome; n=3;
Pezizomycotina|Rep: Contig An08c0100, complete genome -
Aspergillus niger
Length = 355
Score = 84.2 bits (199), Expect = 3e-15
Identities = 45/111 (40%), Positives = 62/111 (55%)
Frame = +2
Query: 224 GFHWKAGYLPRQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVP 403
GF + +++L++GTK+VGGV P G EHLG PVF +VK A+ AS IYVP
Sbjct: 54 GFTGRQATANVKESLEWGTKIVGGVKPGVEG-EHLGLPVFPSVKAAQERAKPDASAIYVP 112
Query: 404 PPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKMPFLRQNKSRLVGPNC 556
+PL+V + E VP HD++R+ Q+K+RLVG NC
Sbjct: 113 GNQTAKAIEEAIEAEIPLVVAVAEHVPIHDILRIHSMLKTQSKTRLVGANC 163
Score = 36.3 bits (80), Expect = 0.71
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +3
Query: 168 YAETRKNLILTSETKVIVQGFTGKQGTFHANKPLTMVLKLL 290
YA+T NL + + T+V+ QGFTG+Q T + + L K++
Sbjct: 35 YADTLPNLKIGAHTRVLFQGFTGRQATANVKESLEWGTKIV 75
>UniRef50_Q2U2T2 Cluster: Succinyl-CoA synthetase; n=10;
Ascomycota|Rep: Succinyl-CoA synthetase - Aspergillus
oryzae
Length = 688
Score = 82.6 bits (195), Expect = 8e-15
Identities = 45/111 (40%), Positives = 61/111 (54%)
Frame = +2
Query: 224 GFHWKAGYLPRQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVP 403
GF + +++L +GTK+VGGV P G EHLG PVF +VK A+ AS IYVP
Sbjct: 55 GFTGRQATANVKESLAWGTKIVGGVKPGVEG-EHLGLPVFPSVKAAQEKAKPDASAIYVP 113
Query: 404 PPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKMPFLRQNKSRLVGPNC 556
+PL+V + E VP HD++R+ Q+K+RLVG NC
Sbjct: 114 GNQTAKAIEEAIEAEIPLVVAVAEHVPIHDVLRIHSMLQTQSKTRLVGANC 164
Score = 36.7 bits (81), Expect = 0.53
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +3
Query: 168 YAETRKNLILTSETKVIVQGFTGKQGTFHANKPLTMVLKLL 290
YA+T NL + + T+V+ QGFTG+Q T + + L K++
Sbjct: 36 YADTLPNLKIGAHTRVLFQGFTGRQATANVKESLAWGTKIV 76
>UniRef50_Q8A9M8 Cluster: Succinyl-CoA ligase [ADP-forming] subunit
alpha; n=4; Bacteria|Rep: Succinyl-CoA ligase
[ADP-forming] subunit alpha - Bacteroides
thetaiotaomicron
Length = 286
Score = 81.8 bits (193), Expect = 1e-14
Identities = 45/111 (40%), Positives = 58/111 (52%)
Frame = +2
Query: 224 GFHWKAGYLPRQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVP 403
G + G ++ +YGT VVGG SP K GTE G PVF T+ EA T A S+I+VP
Sbjct: 15 GITGRDGLFHAKKMKEYGTNVVGGTSPGKGGTEVDGIPVFNTMHEAVKQTQANTSIIFVP 74
Query: 404 PPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKMPFLRQNKSRLVGPNC 556
+ LIVCI EG+P D+++ F Q + LVGPNC
Sbjct: 75 ARFAADTIMEAADAGIRLIVCIAEGIPTLDVIKAHR-FAEQRGAMLVGPNC 124
Score = 33.9 bits (74), Expect = 3.8
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +3
Query: 186 NLILTSETKVIVQGFTGKQGTFHANK 263
++++ T++IVQG TG+ G FHA K
Sbjct: 2 SILIDKSTRLIVQGITGRDGLFHAKK 27
>UniRef50_Q9YD40 Cluster: Succinyl-CoA synthetase alpha chain; n=4;
cellular organisms|Rep: Succinyl-CoA synthetase alpha
chain - Aeropyrum pernix
Length = 292
Score = 80.2 bits (189), Expect = 4e-14
Identities = 43/112 (38%), Positives = 62/112 (55%), Gaps = 1/112 (0%)
Frame = +2
Query: 224 GFHWKAGYLPRQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKA-GTGATASVIYV 400
G + G + L+YGTKVV GV+P K G+E G PV+ +VKEA A S+++V
Sbjct: 15 GITGREGSFHAKAMLEYGTKVVAGVTPGKGGSEVHGVPVYDSVKEALAEHPEINTSIVFV 74
Query: 401 PPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKMPFLRQNKSRLVGPNC 556
P P + L+V ITEG+P HD +R + + RQ + ++GPNC
Sbjct: 75 PAPFAPDAVYEAVDAGIRLVVVITEGIPVHDTMRF-VNYARQKGATIIGPNC 125
Score = 37.1 bits (82), Expect = 0.40
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = +3
Query: 189 LILTSETKVIVQGFTGKQGTFHANKPLTMVLKLL 290
+++ SET+V+VQG TG++G+FHA L K++
Sbjct: 3 VLVDSETRVLVQGITGREGSFHAKAMLEYGTKVV 36
>UniRef50_UPI000023DDE4 Cluster: hypothetical protein FG07898.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG07898.1 - Gibberella zeae PH-1
Length = 320
Score = 77.8 bits (183), Expect = 2e-13
Identities = 40/100 (40%), Positives = 54/100 (54%)
Frame = +2
Query: 257 QQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVPPPGXXXXXXXX 436
Q + YGTKVVGGV+ HLG P+FG++++A S +++
Sbjct: 15 QDTIAYGTKVVGGVTKGPKVDTHLGLPLFGSMEKAAEELNPDVSAVFIRGSLAADAIIEA 74
Query: 437 XXXXMPLIVCITEGVPQHDMVRVKMPFLRQNKSRLVGPNC 556
+PLIV + E VP HDM+RV Q+KSRLVGPNC
Sbjct: 75 IKVEIPLIVSVAEHVPVHDMLRVHEVLRTQSKSRLVGPNC 114
>UniRef50_Q58643 Cluster: Succinyl-CoA ligase [ADP-forming] subunit
alpha; n=95; cellular organisms|Rep: Succinyl-CoA ligase
[ADP-forming] subunit alpha - Methanococcus jannaschii
Length = 294
Score = 76.6 bits (180), Expect = 5e-13
Identities = 44/115 (38%), Positives = 60/115 (52%)
Frame = +2
Query: 209 KSDCSGFHWKAGYLPRQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATAS 388
K+ G + G ++ L+ GTK+VGGV+P K G G PVF TVKEA T A AS
Sbjct: 15 KAIVQGITGRQGSFHTKKMLECGTKIVGGVTPGKGGQNVHGVPVFDTVKEAVKETDANAS 74
Query: 389 VIYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKMPFLRQNKSRLVGPN 553
VI+VP P + LIV ITE +P HD + + + +++GPN
Sbjct: 75 VIFVPAPFAKDAVFEAIDAGIELIVVITEHIPVHDTMEF-VNYAEDVGVKIIGPN 128
Score = 39.1 bits (87), Expect = 0.10
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = +3
Query: 183 KNLILTSETKVIVQGFTGKQGTFHANKPLTMVLKLL 290
K ++L TK IVQG TG+QG+FH K L K++
Sbjct: 6 KMILLDENTKAIVQGITGRQGSFHTKKMLECGTKIV 41
>UniRef50_Q7SDJ1 Cluster: Putative uncharacterized protein
NCU09810.1; n=2; Sordariales|Rep: Putative
uncharacterized protein NCU09810.1 - Neurospora crassa
Length = 646
Score = 76.2 bits (179), Expect = 7e-13
Identities = 41/99 (41%), Positives = 56/99 (56%)
Frame = +2
Query: 257 QQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVPPPGXXXXXXXX 436
+ +L +GTK+VGGV P + G EHLG PV +V++A A+ IYV
Sbjct: 35 KDSLAWGTKIVGGVIPGRTG-EHLGLPVLPSVRQAMEYLKPDATGIYVAAHQAPGAIEEA 93
Query: 437 XXXXMPLIVCITEGVPQHDMVRVKMPFLRQNKSRLVGPN 553
+PLIV + E +P HDM+R+ Q+KSRLVGPN
Sbjct: 94 IEAEVPLIVAVAEHIPVHDMLRIHSMLKTQSKSRLVGPN 132
>UniRef50_Q2V0P6 Cluster: Succinyl-CoA ligase [ADP-forming] subunit
alpha; n=10; cellular organisms|Rep: Succinyl-CoA ligase
[ADP-forming] subunit alpha - Pelotomaculum
thermopropionicum
Length = 290
Score = 75.4 bits (177), Expect = 1e-12
Identities = 38/110 (34%), Positives = 60/110 (54%)
Frame = +2
Query: 224 GFHWKAGYLPRQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVP 403
G G +Q L YGTK+V GV+P K G G PV+ +V+EA ASV+++P
Sbjct: 15 GITGNQGVFHTRQMLAYGTKIVAGVTPGKGGATVEGIPVYNSVREACENHRIDASVLFIP 74
Query: 404 PPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKMPFLRQNKSRLVGPN 553
P +P++V +TEGVP HD +++ + F ++ + ++GPN
Sbjct: 75 APFTKDAAFESLEAGVPVVVIVTEGVPVHDEIQI-VAFAKRKGAIVLGPN 123
Score = 34.7 bits (76), Expect = 2.2
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +3
Query: 189 LILTSETKVIVQGFTGKQGTFHANKPLTMVLKLL 290
+I+ T+V+VQG TG QG FH + L K++
Sbjct: 3 IIIDENTQVLVQGITGNQGVFHTRQMLAYGTKIV 36
>UniRef50_Q18XG5 Cluster: Succinyl-CoA ligase [ADP-forming] subunit
alpha; n=2; Desulfitobacterium hafniense|Rep:
Succinyl-CoA ligase [ADP-forming] subunit alpha -
Desulfitobacterium hafniense (strain DCB-2)
Length = 293
Score = 72.1 bits (169), Expect = 1e-11
Identities = 43/107 (40%), Positives = 58/107 (54%), Gaps = 1/107 (0%)
Frame = +2
Query: 236 KAGYLPRQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVPPPGX 415
K G + L+YGTKVV GV+P + G + G PV+ TV+EAK AS+I VP P
Sbjct: 19 KQGSYHVKAMLEYGTKVVAGVTPGRGGNQVGGLPVYDTVREAKERHKIDASLIMVPAPFV 78
Query: 416 XXXXXXXXXXXMPLIVCITEGVPQHDMVRVKMPFLRQNKS-RLVGPN 553
+PLIV +TE +P D +++ L Q K RL+GPN
Sbjct: 79 LSAAIEAIDAGVPLIVIVTEHIPVKDTMKINA--LAQEKGCRLLGPN 123
Score = 35.1 bits (77), Expect = 1.6
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +3
Query: 189 LILTSETKVIVQGFTGKQGTFHANKPLTMVLKLL 290
LI+ +T VIVQG TGKQG++H L K++
Sbjct: 3 LIINKDTHVIVQGGTGKQGSYHVKAMLEYGTKVV 36
>UniRef50_O26663 Cluster: Succinyl-CoA ligase [ADP-forming] subunit
alpha; n=13; cellular organisms|Rep: Succinyl-CoA ligase
[ADP-forming] subunit alpha - Methanobacterium
thermoautotrophicum
Length = 293
Score = 71.7 bits (168), Expect = 2e-11
Identities = 38/110 (34%), Positives = 58/110 (52%)
Frame = +2
Query: 224 GFHWKAGYLPRQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVP 403
G K G +Q L+YGT++V GV+P K G E LG V+ +V+E AS+I+VP
Sbjct: 19 GITGKQGSFHTRQMLEYGTRIVAGVTPGKGGQEFLGVDVYNSVEEVTEEMDVNASIIFVP 78
Query: 404 PPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKMPFLRQNKSRLVGPN 553
P + L+V ITE +P HD +++ M + + ++GPN
Sbjct: 79 AP-FAKDAAFESIKHLDLVVIITEHIPVHDSMQI-MEYASRMGKTVIGPN 126
Score = 35.1 bits (77), Expect = 1.6
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +3
Query: 189 LILTSETKVIVQGFTGKQGTFHANKPL 269
++L +T+ +VQG TGKQG+FH + L
Sbjct: 7 ILLDEDTRCLVQGITGKQGSFHTRQML 33
>UniRef50_Q7U0Z0 Cluster: Succinyl-CoA ligase [ADP-forming] subunit
alpha; n=32; Actinobacteria (class)|Rep: Succinyl-CoA
ligase [ADP-forming] subunit alpha - Mycobacterium bovis
Length = 303
Score = 71.3 bits (167), Expect = 2e-11
Identities = 47/127 (37%), Positives = 63/127 (49%), Gaps = 10/127 (7%)
Frame = +2
Query: 206 NKSDCSGFHWKAGYLPRQQALDYGTKVVGGVSPKKAGTE--HLGK-------PVFGTVKE 358
NK G + + L GT++VGGV+ +KAGT H K PVFG+V E
Sbjct: 12 NKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRLIKLPVFGSVAE 71
Query: 359 AKAGTGATASVIYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKMPFLRQ-NKS 535
A TGA S+I+VPP +PL+V ITEG+P D L +K+
Sbjct: 72 AMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAYNLEAGHKT 131
Query: 536 RLVGPNC 556
R++GPNC
Sbjct: 132 RIIGPNC 138
>UniRef50_Q07LP7 Cluster: Succinyl-CoA synthetase, alpha subunit;
n=2; Rhodopseudomonas palustris BisA53|Rep: Succinyl-CoA
synthetase, alpha subunit - Rhodopseudomonas palustris
(strain BisA53)
Length = 306
Score = 70.1 bits (164), Expect = 5e-11
Identities = 36/110 (32%), Positives = 58/110 (52%)
Frame = +2
Query: 224 GFHWKAGYLPRQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVP 403
G K G ++ GT++V GV+PK+AG HLG PV+ + + A A T +V+++P
Sbjct: 14 GITGKQGSFWTEKMRSVGTRIVAGVNPKRAGETHLGIPVYASARAAMAETPFDVAVMFIP 73
Query: 404 PPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKMPFLRQNKSRLVGPN 553
P L+V +TE +P HD + + R+N +R++GPN
Sbjct: 74 PALAEEAALDAIEAGAQLLVVLTEHIPIHDQMVIHAA-ARRNGTRILGPN 122
Score = 33.9 bits (74), Expect = 3.8
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +3
Query: 189 LILTSETKVIVQGFTGKQGTFHANKPLTMVLKLLEECHQRR 311
+IL E +V+VQG TGKQG+F K ++ +++ + +R
Sbjct: 2 IILRKEHRVLVQGITGKQGSFWTEKMRSVGTRIVAGVNPKR 42
>UniRef50_A7I683 Cluster: Succinyl-CoA synthetase, alpha subunit;
n=1; Candidatus Methanoregula boonei 6A8|Rep:
Succinyl-CoA synthetase, alpha subunit - Methanoregula
boonei (strain 6A8)
Length = 292
Score = 70.1 bits (164), Expect = 5e-11
Identities = 38/94 (40%), Positives = 50/94 (53%)
Frame = +2
Query: 275 GTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVPPPGXXXXXXXXXXXXMP 454
G VV GV+PKKAG G PV+ TVK+A ATASVI+VP +
Sbjct: 36 GRGVVAGVTPKKAGQSVHGVPVYDTVKDALKEHDATASVIFVPAKAAGDSIMEVADAGLE 95
Query: 455 LIVCITEGVPQHDMVRVKMPFLRQNKSRLVGPNC 556
L V ITE +P HD ++ + + R++GPNC
Sbjct: 96 LAVVITEHIPVHDTMKA-IAYAEMEGCRVIGPNC 128
>UniRef50_Q2RLF6 Cluster: CoA-binding; n=3; Clostridia|Rep:
CoA-binding - Moorella thermoacetica (strain ATCC 39073)
Length = 298
Score = 61.7 bits (143), Expect = 2e-08
Identities = 45/134 (33%), Positives = 60/134 (44%), Gaps = 2/134 (1%)
Frame = +2
Query: 224 GFHWKAGYLPRQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTG-ATASVIYV 400
G + G L +YGTKVV G SP K G G PV+ TVKEA A G SVI+V
Sbjct: 15 GITGREGSLRAAYMKEYGTKVVAGTSPGKGGQTVAGIPVYHTVKEAVAEHGPIDFSVIFV 74
Query: 401 PPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKMPFLRQNKSRLVGPNCSWYHCSRE 580
P + IV E VP HD++ + + + + +RL+GP E
Sbjct: 75 PGRALKVAVKEAADAGIKNIVPCVESVPIHDIMEM-VAYCKMKGTRLIGPGSIGIITPGE 133
Query: 581 -V*NWYHGQLQCTN 619
V W G ++ N
Sbjct: 134 AVVGWLGGNVEWAN 147
>UniRef50_Q18UM7 Cluster: CoA-binding; n=2; Desulfitobacterium
hafniense|Rep: CoA-binding - Desulfitobacterium
hafniense (strain DCB-2)
Length = 292
Score = 59.3 bits (137), Expect = 9e-08
Identities = 34/110 (30%), Positives = 56/110 (50%)
Frame = +2
Query: 224 GFHWKAGYLPRQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVP 403
G K G + A +YGT +V GV+P K G + G PV+ TV+ A AS++ VP
Sbjct: 15 GITGKEGSFWAKHAKNYGTHIVAGVTPGKEGQDVDGIPVYHTVRRAVQEHPIEASLLVVP 74
Query: 404 PPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKMPFLRQNKSRLVGPN 553
P + +IV EG+P H+M++++ L + ++ ++G N
Sbjct: 75 PKAAKGAVLEALDSGIKVIVVTAEGIPLHEMMQLRKIAL-EKQAMVIGGN 123
>UniRef50_A7HMU3 Cluster: CoA-binding domain protein; n=2;
Thermotogaceae|Rep: CoA-binding domain protein -
Fervidobacterium nodosum Rt17-B1
Length = 285
Score = 55.6 bits (128), Expect = 1e-06
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Frame = +2
Query: 224 GFHWKAGYLPRQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKE-AKAGTGATASVIYV 400
G + G ++ ++YGT +V GVS E PV+ T+ + G ++ +V
Sbjct: 12 GITGRYGSYHTKKMIEYGTDIVCGVSKNNEFKEVHNVPVYNTLSDYVSRGFNVDTAIFFV 71
Query: 401 PPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKMPFLRQNKSRLVGPNCSWYHCSRE 580
P P + V ITE VP HD +R+ + +++N +VGPNC S+E
Sbjct: 72 PAPYVMEAFLDAFNNGVKKFVVITEHVPIHDALRM-VDIVKKNNLTMVGPNCPGVIYSKE 130
>UniRef50_A7DNB4 Cluster: CoA-binding domain protein; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep:
CoA-binding domain protein - Candidatus Nitrosopumilus
maritimus SCM1
Length = 305
Score = 55.2 bits (127), Expect = 1e-06
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Frame = +2
Query: 242 GYLPRQQALDYGTKVVGGVSPKKAGTEHLGK-PVFGTVKEAKAGTGATASVIYVPPPGXX 418
G L + + YGT VV GV+P K G + K P++ +++EA T A S+++VP
Sbjct: 32 GSLHARNMIAYGTNVVAGVTPGKGGQKFDDKVPIYNSMQEAVDATNAKISIVFVPAKFFL 91
Query: 419 XXXXXXXXXXMPLIVCITEGVPQHDMVRVKMPFLRQNKSRLVGPN 553
+ L+V I E VP D + + +Q + ++GPN
Sbjct: 92 SAAKDALEAGIKLLVAIPEHVPVRDTMET-LELAKQKGAVVIGPN 135
>UniRef50_Q6LYN5 Cluster: Succinate--CoA ligase (ADP-forming); alpha
subunit; n=8; cellular organisms|Rep: Succinate--CoA
ligase (ADP-forming); alpha subunit - Methanococcus
maripaludis
Length = 288
Score = 52.8 bits (121), Expect = 8e-06
Identities = 30/110 (27%), Positives = 52/110 (47%)
Frame = +2
Query: 224 GFHWKAGYLPRQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVP 403
G G + L+ T ++ GV+P K G + G PV+ TV E A AS+I++P
Sbjct: 15 GITGNQGRFHTKNMLECKTNLLAGVTPGKGGQDVYGVPVYDTVLETVEKYDANASLIFIP 74
Query: 404 PPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKMPFLRQNKSRLVGPN 553
P + L+ ITE +P D + + + + +++ ++GPN
Sbjct: 75 APFVKDAAYEAIDAGVELVTIITEHIPIQDSMDI-VAYGKKHGVNIIGPN 123
Score = 33.5 bits (73), Expect = 5.0
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +3
Query: 189 LILTSETKVIVQGFTGKQGTFHANKPLTMVLKLL 290
++L T+ IVQG TG QG FH L LL
Sbjct: 3 ILLDENTRAIVQGITGNQGRFHTKNMLECKTNLL 36
>UniRef50_A0RTT7 Cluster: Succinyl-CoA synthetase, alpha subunit;
n=1; Cenarchaeum symbiosum|Rep: Succinyl-CoA synthetase,
alpha subunit - Cenarchaeum symbiosum
Length = 304
Score = 52.8 bits (121), Expect = 8e-06
Identities = 30/110 (27%), Positives = 51/110 (46%)
Frame = +2
Query: 224 GFHWKAGYLPRQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVP 403
G K G + +YGT + GV+ ++ + G P++G + EA TGA S ++VP
Sbjct: 26 GITGKFGSTHTRLMKEYGTNIAAGVTLREGAKDFEGIPLYGNIGEAVEATGAQISAMFVP 85
Query: 404 PPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKMPFLRQNKSRLVGPN 553
+ L+V I E VP D + + + R+ + ++GPN
Sbjct: 86 AKFFLSAAKDALEAGIKLLVAIPEHVPVRDTLEL-LELARKKDAIVIGPN 134
>UniRef50_O67729 Cluster: Succinyl-CoA ligase alpha subunit; n=4;
Bacteria|Rep: Succinyl-CoA ligase alpha subunit -
Aquifex aeolicus
Length = 368
Score = 51.6 bits (118), Expect = 2e-05
Identities = 32/89 (35%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = +2
Query: 293 GVSPKKAGTEHLGKPVFGTVKEAKA---GTGATASVIYVPPPGXXXXXXXXXXXXMPLIV 463
GV+P K GTE G PVF TVKEA + G ++YVPP + LI
Sbjct: 66 GVTPGKGGTEVAGVPVFNTVKEALSSPEGKDVNTGLVYVPPASVKDAVIELIDAGIKLIY 125
Query: 464 CITEGVPQHDMVRVKMPFLRQNKSRLVGP 550
+TE VP D V + ++ +VGP
Sbjct: 126 IVTEHVPIRDTVYF-YHYAKERGVTIVGP 153
>UniRef50_Q05FP1 Cluster: Succinyl-CoA synthetase alpha subunit;
n=1; Candidatus Carsonella ruddii PV|Rep: Succinyl-CoA
synthetase alpha subunit - Carsonella ruddii (strain PV)
Length = 274
Score = 48.0 bits (109), Expect = 2e-04
Identities = 26/110 (23%), Positives = 52/110 (47%)
Frame = +2
Query: 224 GFHWKAGYLPRQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVP 403
G K G+ + ++++GTK+ G++ K G P++ + +A SV+Y+P
Sbjct: 10 GITGKFGFQHTKVSINFGTKIKCGINNSKNGGIVFHIPIYSSAIKAVKSNNCKISVLYIP 69
Query: 404 PPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKMPFLRQNKSRLVGPN 553
+ +I+CITE + D++++K + + K +GPN
Sbjct: 70 YFVCKKTILENIYSGIKIIICITENISVFDILKIKY-YCEKYKIIFIGPN 118
>UniRef50_A7ENF5 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 580
Score = 43.6 bits (98), Expect = 0.005
Identities = 26/74 (35%), Positives = 39/74 (52%)
Frame = +2
Query: 257 QQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVPPPGXXXXXXXX 436
++++++GT +VGGV+P K G EHLG PV TVKE + + + ++ PG
Sbjct: 6 KESIEWGTNIVGGVTPGKNG-EHLGLPVLPTVKE--ENSQSKSRLVGANTPGIISAIGKC 62
Query: 437 XXXXMPLIVCITEG 478
PL C T G
Sbjct: 63 RIGFQPL-SCFTPG 75
>UniRef50_Q8YQC0 Cluster: Succinyl-CoA synthetase alpha chain; n=6;
Cyanobacteria|Rep: Succinyl-CoA synthetase alpha chain -
Anabaena sp. (strain PCC 7120)
Length = 293
Score = 42.7 bits (96), Expect = 0.008
Identities = 34/111 (30%), Positives = 47/111 (42%), Gaps = 1/111 (0%)
Frame = +2
Query: 224 GFHWKAGYLPRQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGA-TASVIYV 400
GFH Q YGT +V GV P G E PVF V+E G+ ++I V
Sbjct: 13 GFHEFISENHIAQMKAYGTNLVAGVQPGYGGQELYHLPVFDLVEEVVGQFGSIDTTIICV 72
Query: 401 PPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKMPFLRQNKSRLVGPN 553
P + I+ I+ GVP DMV + + ++ +VGPN
Sbjct: 73 HPYQVLDAALEAIASHIRQIIIISAGVPPLDMVEL-LRKAEAGETLVVGPN 122
>UniRef50_P74286 Cluster: Succinyl-CoA synthetase; n=3;
Chroococcales|Rep: Succinyl-CoA synthetase -
Synechocystis sp. (strain PCC 6803)
Length = 302
Score = 38.3 bits (85), Expect = 0.18
Identities = 33/103 (32%), Positives = 44/103 (42%), Gaps = 2/103 (1%)
Frame = +2
Query: 197 YK*NKSDCSGFHWKAGYLPRQQALDYGTKVVGGVSPKKAGTEHLGK-PVFGTVKEAKAGT 373
+K +K G H G +Q GTK+V GVSP G E +G PVF V A
Sbjct: 4 HKESKVLLQGVHHPLGLTYLEQMRSCGTKLVAGVSPGHGG-ELIGDLPVFDLVDLAVKTV 62
Query: 374 G-ATASVIYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMV 499
G S+I PP + +V ++ GVP DM+
Sbjct: 63 GPVDISLILNPPYRVLDAALEAIAAGIRQLVIVSAGVPPLDMI 105
>UniRef50_A5C1W8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 325
Score = 34.3 bits (75), Expect = 2.9
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +2
Query: 458 IVCITEGVPQHDMVRVKMPFLRQN 529
IVCITE +PQHDM RVK Q+
Sbjct: 297 IVCITERIPQHDMDRVKAALYGQS 320
>UniRef50_A0LDT0 Cluster: CoA-binding domain protein; n=4;
Proteobacteria|Rep: CoA-binding domain protein -
Magnetococcus sp. (strain MC-1)
Length = 916
Score = 33.5 bits (73), Expect = 5.0
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 7/101 (6%)
Frame = +2
Query: 275 GTKVVGGVSPKKAG----TEHLGKPVFGTVKEA-KAGTGATASVIYVPPPGXXXXXXXXX 439
G +V G P ++G T PV+ V EA +AG A+V+YVPP G
Sbjct: 65 GGNIVCGTQPGRSGSTLKTPAGDIPVYSNVLEAVEAGHVFNAAVVYVPPSGVKDAVIEAV 124
Query: 440 XXXMPL--IVCITEGVPQHDMVRVKMPFLRQNKSRLVGPNC 556
L +V +TE V D R+ + + ++G NC
Sbjct: 125 RVSPNLKKVVILTEKVAVKD-ARIIRAYCQMRGVDVLGANC 164
>UniRef50_A6PEV1 Cluster: Binding-protein-dependent transport
systems inner membrane component; n=1; Shewanella
sediminis HAW-EB3|Rep: Binding-protein-dependent
transport systems inner membrane component - Shewanella
sediminis HAW-EB3
Length = 317
Score = 32.7 bits (71), Expect = 8.7
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -2
Query: 336 GLPRCSVPAFFGDTPPTTLVP*SRACWRGRYPA 238
GLP P FFGDT P + + W G +PA
Sbjct: 50 GLPTLEQPLFFGDTAPLAAMMGLQPVWEGIWPA 82
>UniRef50_A0QKT7 Cluster: Ftsk/spoiiie family protein; n=2;
Mycobacterium avium|Rep: Ftsk/spoiiie family protein -
Mycobacterium avium (strain 104)
Length = 1197
Score = 32.7 bits (71), Expect = 8.7
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +2
Query: 272 YGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVPPPG 412
+GT+VVG VS G+ + V + AG G A +++PP G
Sbjct: 646 FGTRVVGPVSRPVEAAHPSGRSISAAVLDRLAGHGPAAHRVWLPPLG 692
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 692,592,762
Number of Sequences: 1657284
Number of extensions: 14169725
Number of successful extensions: 33900
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 32337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33810
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54132236449
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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