Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0117
(691 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457139-1|CAG33420.1| 333|Homo sapiens SUCLG1 protein. 148 2e-35
BC000504-1|AAH00504.1| 333|Homo sapiens SUCLG1 protein protein. 148 2e-35
AC096770-1|AAY24107.1| 333|Homo sapiens unknown protein. 148 2e-35
AF104921-1|AAD17940.2| 333|Homo sapiens succinyl-CoA synthetase... 146 5e-35
Z68204-1|CAA92426.1| 132|Homo sapiens succinyl coenzyme A synth... 105 2e-22
>CR457139-1|CAG33420.1| 333|Homo sapiens SUCLG1 protein.
Length = 333
Score = 148 bits (358), Expect = 2e-35
Identities = 72/119 (60%), Positives = 80/119 (67%)
Frame = +2
Query: 200 K*NKSDCSGFHWKAGYLPRQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGA 379
K K C GF K G QQAL+YGTK+VGG +P K G HLG PVF TVKEAK TGA
Sbjct: 41 KNTKIICQGFTGKQGTFHSQQALEYGTKLVGGTTPGKGGQTHLGLPVFNTVKEAKEQTGA 100
Query: 380 TASVIYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKMPFLRQNKSRLVGPNC 556
TASVIYVPPP +PL+VCITEG+PQ DMVRVK LRQ K+RL+GPNC
Sbjct: 101 TASVIYVPPPFAAAAINEAIEAEIPLVVCITEGIPQQDMVRVKHKLLRQEKTRLIGPNC 159
Score = 48.4 bits (110), Expect = 2e-05
Identities = 40/146 (27%), Positives = 64/146 (43%), Gaps = 2/146 (1%)
Frame = +3
Query: 168 YAETRKNLILTSETKVIVQGFTGKQGTFHANKPLTMVLKLLEECHQRRLVQNILVSLCLV 347
Y +R++L + TK+I QGFTGKQGTFH+ + L KL+ + Q L
Sbjct: 30 YTASRQHLYVDKNTKIICQGFTGKQGTFHSQQALEYGTKLVGGTTPGKGGQTHLGLPVFN 89
Query: 348 QSKRQRQAQXXXXXXXXXXXXXXXXPF*KLLRLKCP-SLCALQKV-CHNMIWCE*KCPS* 521
K ++ + + + P +C + + +M+ + K
Sbjct: 90 TVKEAKEQTGATASVIYVPPPFAAAAINEAIEAEIPLVVCITEGIPQQDMVRVKHKLLRQ 149
Query: 522 DKTSLDWLVLTVPGIIAPEKCKIGIM 599
+KT L + PG+I P +CKIGIM
Sbjct: 150 EKTRL--IGPNCPGVINPGECKIGIM 173
>BC000504-1|AAH00504.1| 333|Homo sapiens SUCLG1 protein protein.
Length = 333
Score = 148 bits (358), Expect = 2e-35
Identities = 72/119 (60%), Positives = 80/119 (67%)
Frame = +2
Query: 200 K*NKSDCSGFHWKAGYLPRQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGA 379
K K C GF K G QQAL+YGTK+VGG +P K G HLG PVF TVKEAK TGA
Sbjct: 41 KNTKIICQGFTGKQGTFHSQQALEYGTKLVGGTTPGKGGQTHLGLPVFNTVKEAKEQTGA 100
Query: 380 TASVIYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKMPFLRQNKSRLVGPNC 556
TASVIYVPPP +PL+VCITEG+PQ DMVRVK LRQ K+RL+GPNC
Sbjct: 101 TASVIYVPPPFAAAAINEAIEAEIPLVVCITEGIPQQDMVRVKHKLLRQEKTRLIGPNC 159
Score = 48.4 bits (110), Expect = 2e-05
Identities = 40/146 (27%), Positives = 64/146 (43%), Gaps = 2/146 (1%)
Frame = +3
Query: 168 YAETRKNLILTSETKVIVQGFTGKQGTFHANKPLTMVLKLLEECHQRRLVQNILVSLCLV 347
Y +R++L + TK+I QGFTGKQGTFH+ + L KL+ + Q L
Sbjct: 30 YTASRQHLYVDKNTKIICQGFTGKQGTFHSQQALEYGTKLVGGTTPGKGGQTHLGLPVFN 89
Query: 348 QSKRQRQAQXXXXXXXXXXXXXXXXPF*KLLRLKCP-SLCALQKV-CHNMIWCE*KCPS* 521
K ++ + + + P +C + + +M+ + K
Sbjct: 90 TVKEAKEQTGATASVIYVPPPFAAAAINEAIEAEIPLVVCITEGIPQQDMVRVKHKLLRQ 149
Query: 522 DKTSLDWLVLTVPGIIAPEKCKIGIM 599
+KT L + PG+I P +CKIGIM
Sbjct: 150 EKTRL--IGPNCPGVINPGECKIGIM 173
>AC096770-1|AAY24107.1| 333|Homo sapiens unknown protein.
Length = 333
Score = 148 bits (358), Expect = 2e-35
Identities = 72/119 (60%), Positives = 80/119 (67%)
Frame = +2
Query: 200 K*NKSDCSGFHWKAGYLPRQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGA 379
K K C GF K G QQAL+YGTK+VGG +P K G HLG PVF TVKEAK TGA
Sbjct: 41 KNTKIICQGFTGKQGTFHSQQALEYGTKLVGGTTPGKGGQTHLGLPVFNTVKEAKEQTGA 100
Query: 380 TASVIYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKMPFLRQNKSRLVGPNC 556
TASVIYVPPP +PL+VCITEG+PQ DMVRVK LRQ K+RL+GPNC
Sbjct: 101 TASVIYVPPPFAAAAINEAIEAEIPLVVCITEGIPQQDMVRVKHKLLRQEKTRLIGPNC 159
Score = 48.4 bits (110), Expect = 2e-05
Identities = 40/146 (27%), Positives = 64/146 (43%), Gaps = 2/146 (1%)
Frame = +3
Query: 168 YAETRKNLILTSETKVIVQGFTGKQGTFHANKPLTMVLKLLEECHQRRLVQNILVSLCLV 347
Y +R++L + TK+I QGFTGKQGTFH+ + L KL+ + Q L
Sbjct: 30 YTASRQHLYVDKNTKIICQGFTGKQGTFHSQQALEYGTKLVGGTTPGKGGQTHLGLPVFN 89
Query: 348 QSKRQRQAQXXXXXXXXXXXXXXXXPF*KLLRLKCP-SLCALQKV-CHNMIWCE*KCPS* 521
K ++ + + + P +C + + +M+ + K
Sbjct: 90 TVKEAKEQTGATASVIYVPPPFAAAAINEAIEAEIPLVVCITEGIPQQDMVRVKHKLLRQ 149
Query: 522 DKTSLDWLVLTVPGIIAPEKCKIGIM 599
+KT L + PG+I P +CKIGIM
Sbjct: 150 EKTRL--IGPNCPGVINPGECKIGIM 173
>AF104921-1|AAD17940.2| 333|Homo sapiens succinyl-CoA synthetase
alpha subunit protein.
Length = 333
Score = 146 bits (355), Expect = 5e-35
Identities = 72/119 (60%), Positives = 79/119 (66%)
Frame = +2
Query: 200 K*NKSDCSGFHWKAGYLPRQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGA 379
K K C GF K G QQAL+YGTK+VGG P K G HLG PVF TVKEAK TGA
Sbjct: 41 KNTKIICQGFTGKQGTFHSQQALEYGTKLVGGTLPGKGGQTHLGLPVFNTVKEAKEQTGA 100
Query: 380 TASVIYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKMPFLRQNKSRLVGPNC 556
TASVIYVPPP +PL+VCITEG+PQ DMVRVK LRQ K+RL+GPNC
Sbjct: 101 TASVIYVPPPFAAAAINEAIEAEIPLVVCITEGIPQQDMVRVKHKLLRQEKTRLIGPNC 159
Score = 48.0 bits (109), Expect = 3e-05
Identities = 40/146 (27%), Positives = 64/146 (43%), Gaps = 2/146 (1%)
Frame = +3
Query: 168 YAETRKNLILTSETKVIVQGFTGKQGTFHANKPLTMVLKLLEECHQRRLVQNILVSLCLV 347
Y +R++L + TK+I QGFTGKQGTFH+ + L KL+ + Q L
Sbjct: 30 YTASRQHLYVDKNTKIICQGFTGKQGTFHSQQALEYGTKLVGGTLPGKGGQTHLGLPVFN 89
Query: 348 QSKRQRQAQXXXXXXXXXXXXXXXXPF*KLLRLKCP-SLCALQKV-CHNMIWCE*KCPS* 521
K ++ + + + P +C + + +M+ + K
Sbjct: 90 TVKEAKEQTGATASVIYVPPPFAAAAINEAIEAEIPLVVCITEGIPQQDMVRVKHKLLRQ 149
Query: 522 DKTSLDWLVLTVPGIIAPEKCKIGIM 599
+KT L + PG+I P +CKIGIM
Sbjct: 150 EKTRL--IGPNCPGVINPGECKIGIM 173
>Z68204-1|CAA92426.1| 132|Homo sapiens succinyl coenzyme A
synthetase protein.
Length = 132
Score = 105 bits (251), Expect = 2e-22
Identities = 53/92 (57%), Positives = 58/92 (63%)
Frame = +2
Query: 200 K*NKSDCSGFHWKAGYLPRQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGA 379
K K C GF K G QQAL+YGTK+VGG +P K G HLG PVF TVKEAK TGA
Sbjct: 41 KNTKIICQGFTGKQGTFHSQQALEYGTKLVGGTTPGKGGQTHLGLPVFNTVKEAKEQTGA 100
Query: 380 TASVIYVPPPGXXXXXXXXXXXXMPLIVCITE 475
TASVIYVPPP +PL+VCITE
Sbjct: 101 TASVIYVPPPFAAAAINEAIEAEIPLVVCITE 132
Score = 46.4 bits (105), Expect = 1e-04
Identities = 20/41 (48%), Positives = 28/41 (68%)
Frame = +3
Query: 168 YAETRKNLILTSETKVIVQGFTGKQGTFHANKPLTMVLKLL 290
Y +R++L + TK+I QGFTGKQGTFH+ + L KL+
Sbjct: 30 YTASRQHLYVDKNTKIICQGFTGKQGTFHSQQALEYGTKLV 70
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,803,022
Number of Sequences: 237096
Number of extensions: 2269881
Number of successful extensions: 8182
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8176
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7895240574
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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