Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0117
(691 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70203-4|CAA94107.1| 322|Caenorhabditis elegans Hypothetical pr... 135 3e-32
AF003389-2|AAC71132.1| 321|Caenorhabditis elegans Hypothetical ... 126 2e-29
U37429-10|AAN63413.2| 100|Caenorhabditis elegans Hypothetical p... 29 3.1
Z73104-7|CAI59116.1| 513|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z73104-5|CAI59114.1| 439|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z73104-4|CAA97435.2| 547|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z68880-3|CAA93096.1| 138|Caenorhabditis elegans Hypothetical pr... 28 7.2
>Z70203-4|CAA94107.1| 322|Caenorhabditis elegans Hypothetical
protein C05G5.4 protein.
Length = 322
Score = 135 bits (326), Expect = 3e-32
Identities = 66/111 (59%), Positives = 75/111 (67%)
Frame = +2
Query: 224 GFHWKAGYLPRQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVP 403
GF K G +Q L+Y TKVVGGV+ KAGTEHLG PVF V EA+ TGA ASVIYVP
Sbjct: 40 GFTGKQGTFHGKQMLEYNTKVVGGVNANKAGTEHLGLPVFKNVSEARNKTGADASVIYVP 99
Query: 404 PPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKMPFLRQNKSRLVGPNC 556
+PL+VCITEG+PQHDMVRVK L+QNK+RLVGPNC
Sbjct: 100 ASAAGSAIEEAMDAEIPLVVCITEGIPQHDMVRVKSRLLKQNKTRLVGPNC 150
Score = 50.4 bits (115), Expect = 1e-06
Identities = 41/146 (28%), Positives = 63/146 (43%), Gaps = 2/146 (1%)
Frame = +3
Query: 168 YAETRKNLILTSETKVIVQGFTGKQGTFHANKPLTMVLKLLEECHQRRLVQNILVSLCLV 347
Y T NL + +TKVIVQGFTGKQGTFH + L K++ + + L
Sbjct: 21 YNSTYNNLKINKDTKVIVQGFTGKQGTFHGKQMLEYNTKVVGGVNANKAGTEHLGLPVFK 80
Query: 348 QSKRQRQAQXXXXXXXXXXXXXXXXPF*KLLRLKCP-SLCALQKV-CHNMIWCE*KCPS* 521
R + + + P +C + + H+M+ + +
Sbjct: 81 NVSEARNKTGADASVIYVPASAAGSAIEEAMDAEIPLVVCITEGIPQHDMVRVKSRLLKQ 140
Query: 522 DKTSLDWLVLTVPGIIAPEKCKIGIM 599
+KT L + PGII+ ++CKIGIM
Sbjct: 141 NKTRL--VGPNCPGIISADQCKIGIM 164
>AF003389-2|AAC71132.1| 321|Caenorhabditis elegans Hypothetical
protein F23H11.3 protein.
Length = 321
Score = 126 bits (303), Expect = 2e-29
Identities = 63/111 (56%), Positives = 73/111 (65%)
Frame = +2
Query: 224 GFHWKAGYLPRQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVP 403
GF + G +Q L+Y T +VGGVSP KAG HLG PVFG+V EAK TGA A+VIYVP
Sbjct: 41 GFTGRQGTFHSKQMLEYNTNLVGGVSPNKAGQTHLGLPVFGSVAEAKDRTGADATVIYVP 100
Query: 404 PPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKMPFLRQNKSRLVGPNC 556
G + LIV ITEG+PQ DMVRVK L+QNKSRL+GPNC
Sbjct: 101 AAGAARAIHEAMDAEIGLIVAITEGIPQQDMVRVKNRLLKQNKSRLLGPNC 151
Score = 50.8 bits (116), Expect = 9e-07
Identities = 21/34 (61%), Positives = 27/34 (79%)
Frame = +3
Query: 168 YAETRKNLILTSETKVIVQGFTGKQGTFHANKPL 269
Y +TR NL++ TKVIVQGFTG+QGTFH+ + L
Sbjct: 22 YNDTRNNLMINKSTKVIVQGFTGRQGTFHSKQML 55
>U37429-10|AAN63413.2| 100|Caenorhabditis elegans Hypothetical
protein F09E5.16 protein.
Length = 100
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -1
Query: 415 SSRGRYINNRGSCSCACLCLFD-CTKHRLTK 326
SSRG + R + S AC CL CT H +TK
Sbjct: 70 SSRGSVMRRRSAGSYACPCLHKVCTYHCMTK 100
>Z73104-7|CAI59116.1| 513|Caenorhabditis elegans Hypothetical
protein K08D8.4d protein.
Length = 513
Score = 28.7 bits (61), Expect = 4.1
Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Frame = -2
Query: 663 RSMSQNADTTPMXTTFVHCSWP*YQFYTSREQ*YQEQLGPTSLDLFCLKKG--IFTRTIS 490
RS N + TT + P Q Y Y + GPT+LD+ K G +FT T +
Sbjct: 360 RSFDFNRQSYAQDTTETFVTDPNNQMYFKFNVKYLDTNGPTTLDVNVYKNGVAVFTATYT 419
Query: 489 CCGTP 475
P
Sbjct: 420 ATNPP 424
>Z73104-5|CAI59114.1| 439|Caenorhabditis elegans Hypothetical
protein K08D8.4b protein.
Length = 439
Score = 28.7 bits (61), Expect = 4.1
Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Frame = -2
Query: 663 RSMSQNADTTPMXTTFVHCSWP*YQFYTSREQ*YQEQLGPTSLDLFCLKKG--IFTRTIS 490
RS N + TT + P Q Y Y + GPT+LD+ K G +FT T +
Sbjct: 252 RSFDFNRQSYAQDTTETFVTDPNNQMYFKFNVKYLDTNGPTTLDVNVYKNGVAVFTATYT 311
Query: 489 CCGTP 475
P
Sbjct: 312 ATNPP 316
>Z73104-4|CAA97435.2| 547|Caenorhabditis elegans Hypothetical
protein K08D8.4a protein.
Length = 547
Score = 28.7 bits (61), Expect = 4.1
Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Frame = -2
Query: 663 RSMSQNADTTPMXTTFVHCSWP*YQFYTSREQ*YQEQLGPTSLDLFCLKKG--IFTRTIS 490
RS N + TT + P Q Y Y + GPT+LD+ K G +FT T +
Sbjct: 360 RSFDFNRQSYAQDTTETFVTDPNNQMYFKFNVKYLDTNGPTTLDVNVYKNGVAVFTATYT 419
Query: 489 CCGTP 475
P
Sbjct: 420 ATNPP 424
>Z68880-3|CAA93096.1| 138|Caenorhabditis elegans Hypothetical
protein T14G10.4 protein.
Length = 138
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +2
Query: 590 WYHGQLQCTNVVXI-GVVSAFWDID 661
W+ GQLQCT+ + VV WD D
Sbjct: 25 WFVGQLQCTDTSKLENVVVEIWDKD 49
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,120,541
Number of Sequences: 27780
Number of extensions: 351158
Number of successful extensions: 837
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 837
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -