Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0114
         (513 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_1349 + 35841694-35843738,35844506-35844624,35844932-358450...    29   1.7  
01_07_0111 - 41137822-41138973,41139453-41139540,41139850-411399...    29   2.9  
10_08_0371 + 17265691-17265788,17265873-17265971,17266586-172666...    27   6.7  

>02_05_1349 +
           35841694-35843738,35844506-35844624,35844932-35845075,
           35845189-35845310,35845474-35845609,35845861-35845957,
           35846727-35846899,35847099-35847262,35847466-35847537,
           35847833-35847928,35847999-35848124
          Length = 1097

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 12/30 (40%), Positives = 21/30 (70%)
 Frame = -3

Query: 205 SWGKIDIPSIKSKLELLPGLGSVEAKLVFV 116
           S GK+++ S+ S L L  G+G++EA  +F+
Sbjct: 768 SSGKLELSSVSSALVLAAGIGTIEALALFL 797


>01_07_0111 - 41137822-41138973,41139453-41139540,41139850-41139969,
            41140165-41140211,41140796-41141029,41141305-41141505,
            41141506-41143407,41144140-41145303,41145574-41145879
          Length = 1737

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +3

Query: 339  YHARTYPHYVDKCSRSLPAIIPIRFCDRSTCKSDSVP 449
            Y  + +P ++   S  LP ++ IR C+ +TC  DS+P
Sbjct: 1019 YMCKDFPSWLTGISSYLPYLMCIRICNLATC--DSLP 1053


>10_08_0371 +
           17265691-17265788,17265873-17265971,17266586-17266628,
           17267250-17267321,17267400-17267495,17267609-17267842,
           17267914-17268097,17268247-17268358,17268447-17268533,
           17268703-17268841,17269628-17269718,17270045-17270154,
           17270309-17270413,17270982-17271055,17271379-17271454,
           17271786-17272022,17272419-17272490,17273082-17273153,
           17273240-17273304,17273306-17273383,17273384-17273486,
           17273769-17273858,17274873-17274980,17275063-17275113,
           17276126-17276203,17276284-17276346,17276944-17277140,
           17277243-17277312,17277640-17277828
          Length = 1030

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 13/64 (20%), Positives = 37/64 (57%)
 Frame = +1

Query: 283 FNNLIAL*RKVNNVFARECTMRELTPTTSTNAQEVCRLLYLFVSVIDPLVNPIRFQFDSI 462
           + +L AL R + N+ +++  +  L+ ++   +Q++  ++Y+ V ++ PL++    ++  +
Sbjct: 797 YKDLRALLRLLTNICSKDL-VGFLSDSSIEGSQDIAEVIYVGVDIVTPLISLDLLKYPKL 855

Query: 463 *FDY 474
             DY
Sbjct: 856 SRDY 859


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,232,265
Number of Sequences: 37544
Number of extensions: 162080
Number of successful extensions: 266
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 266
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1106928780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)