Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0110
(586 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 26 0.27
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 26 0.27
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 26 0.27
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 26 0.27
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 26 0.27
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 26 0.27
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 26 0.27
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 25 0.36
DQ138189-1|ABA03053.1| 162|Tribolium castaneum bursicon protein. 23 2.5
AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface pro... 22 4.4
AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein. 21 7.7
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 25.8 bits (54), Expect = 0.27
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
Frame = +2
Query: 374 QVAPHLPRLRSAGRGDGHPLPRTLHHRRQAEPQ---ADHHQRP 493
QVAP P+ A GH L T+ Q +PQ + H Q P
Sbjct: 47 QVAPQYPQHPYAAPAPGHGLQPTMGDYTQLQPQRLASTHLQSP 89
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 25.8 bits (54), Expect = 0.27
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
Frame = +2
Query: 374 QVAPHLPRLRSAGRGDGHPLPRTLHHRRQAEPQ---ADHHQRP 493
QVAP P+ A GH L T+ Q +PQ + H Q P
Sbjct: 47 QVAPQYPQHPYAAPAPGHGLQPTMGDYTQLQPQRLASTHLQSP 89
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 25.8 bits (54), Expect = 0.27
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
Frame = +2
Query: 374 QVAPHLPRLRSAGRGDGHPLPRTLHHRRQAEPQ---ADHHQRP 493
QVAP P+ A GH L T+ Q +PQ + H Q P
Sbjct: 47 QVAPQYPQHPYAAPAPGHGLQPTMGDYTQLQPQRLASTHLQSP 89
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 25.8 bits (54), Expect = 0.27
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
Frame = +2
Query: 374 QVAPHLPRLRSAGRGDGHPLPRTLHHRRQAEPQ---ADHHQRP 493
QVAP P+ A GH L T+ Q +PQ + H Q P
Sbjct: 47 QVAPQYPQHPYAAPAPGHGLQPTMGDYTQLQPQRLASTHLQSP 89
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 25.8 bits (54), Expect = 0.27
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
Frame = +2
Query: 374 QVAPHLPRLRSAGRGDGHPLPRTLHHRRQAEPQ---ADHHQRP 493
QVAP P+ A GH L T+ Q +PQ + H Q P
Sbjct: 47 QVAPQYPQHPYAAPAPGHGLQPTMGDYTQLQPQRLASTHLQSP 89
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 25.8 bits (54), Expect = 0.27
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
Frame = +2
Query: 374 QVAPHLPRLRSAGRGDGHPLPRTLHHRRQAEPQ---ADHHQRP 493
QVAP P+ A GH L T+ Q +PQ + H Q P
Sbjct: 47 QVAPQYPQHPYAAPAPGHGLQPTMGDYTQLQPQRLASTHLQSP 89
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 25.8 bits (54), Expect = 0.27
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
Frame = +2
Query: 374 QVAPHLPRLRSAGRGDGHPLPRTLHHRRQAEPQ---ADHHQRP 493
QVAP P+ A GH L T+ Q +PQ + H Q P
Sbjct: 47 QVAPQYPQHPYAAPAPGHGLQPTMGDYTQLQPQRLASTHLQSP 89
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 25.4 bits (53), Expect = 0.36
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2
Query: 374 QVAPHLPRLRSAGRGDGHPLPRTLHHRRQAEPQ 472
QVAP P+ A GH L T+ Q +PQ
Sbjct: 47 QVAPQYPQHPYAAPAPGHGLQPTMGDYTQLQPQ 79
>DQ138189-1|ABA03053.1| 162|Tribolium castaneum bursicon protein.
Length = 162
Score = 22.6 bits (46), Expect = 2.5
Identities = 10/28 (35%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Frame = -2
Query: 429 GC-PSPRPALRSRGRCGATCRLSEGCSW 349
GC P P P+ GRC + ++S W
Sbjct: 54 GCVPKPIPSFACIGRCASYIQVSGSKIW 81
>AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface
protein chaoptin protein.
Length = 782
Score = 21.8 bits (44), Expect = 4.4
Identities = 12/46 (26%), Positives = 20/46 (43%)
Frame = +1
Query: 7 SHSPVLSVFVYYSKVFSFNKMPLQMTKPAPQFKATAVVNGEFKDIS 144
S P LS S +FN +P + A + +N ++ D+S
Sbjct: 458 SQVPALSTPNLLSLSLAFNSLPTVALEVAGNISSLRYLNLDYNDLS 503
>AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein.
Length = 292
Score = 21.0 bits (42), Expect = 7.7
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +3
Query: 411 DEETGIPFRGLFIIDDKQN 467
D ++ +PF GLFI + N
Sbjct: 15 DSDSKLPFSGLFIENQAGN 33
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,642
Number of Sequences: 336
Number of extensions: 2516
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14621740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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