Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0110
(586 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0116 + 19901546-19901737,19901825-19901899,19902034-199021... 83 1e-16
06_01_0671 - 4899611-4899829,4900870-4901448 42 5e-04
04_03_0889 + 20568984-20569037,20569271-20569345,20569981-205700... 38 0.004
07_03_1427 + 26495072-26495148,26495323-26495468,26495581-264957... 38 0.006
07_03_1428 + 26498201-26498318,26498422-26498570,26498685-26499080 37 0.014
01_03_0105 + 12604125-12604583 32 0.29
01_01_1145 + 9073973-9074281,9075440-9075998,9076088-9076241,907... 30 1.2
08_02_1147 - 24688686-24689729,24689875-24690036,24690339-246903... 29 2.1
01_01_0288 - 2373764-2373923,2374016-2374398,2375426-2375710 29 2.1
03_05_0428 + 24152409-24152783,24152885-24153139,24153204-24153917 29 2.7
03_03_0208 + 15459260-15459922 29 2.7
07_03_1139 + 24254662-24255306 29 3.6
03_05_0276 + 22646416-22646760,22646858-22647090,22647184-226472... 29 3.6
10_08_0621 + 19328357-19329545,19329967-19329986 28 4.8
07_03_1402 + 26302443-26302575,26302851-26302980,26303128-26303893 28 4.8
07_01_0717 - 5482084-5482482 28 4.8
05_01_0288 + 2253005-2253137,2253269-2253398,2253504-2254524 28 4.8
03_03_0101 - 14431327-14432390,14432599-14432731 28 4.8
02_03_0183 + 16106205-16106474 28 4.8
02_02_0154 + 7263707-7263782,7263908-7264248 28 4.8
01_06_0448 + 29462920-29463052,29463220-29463349,29463608-294637... 28 4.8
01_02_0017 - 10215995-10217018,10217120-10217249,10217364-10217496 28 4.8
12_01_0357 + 2720860-2721066,2721169-2721384,2721481-2723608,272... 28 6.3
09_02_0453 - 9502060-9502773,9502795-9503367 28 6.3
04_04_1398 - 33245268-33245876,33247516-33247608,33247639-332478... 28 6.3
02_01_0449 - 3229260-3229365,3230264-3230396,3230536-3230625,323... 28 6.3
10_08_0625 + 19362303-19363853 27 8.3
10_06_0180 + 11526139-11526172,11526365-11527218 27 8.3
09_02_0057 - 3697255-3698116,3698191-3698351,3698442-3698636,369... 27 8.3
07_03_0915 + 22556522-22556536,22557719-22558177,22559796-225602... 27 8.3
07_03_0914 + 22554314-22554328,22554586-22555065 27 8.3
07_01_0478 - 3605306-3605614,3605766-3605906 27 8.3
02_05_1240 + 35181983-35182615,35183025-35183856,35183936-351844... 27 8.3
02_03_0131 - 15576422-15577021 27 8.3
>02_04_0116 +
19901546-19901737,19901825-19901899,19902034-19902115,
19902219-19902298,19903279-19903482,19903625-19903750,
19903872-19903985,19904802-19904918
Length = 329
Score = 83.4 bits (197), Expect = 1e-16
Identities = 41/94 (43%), Positives = 57/94 (60%)
Frame = +3
Query: 297 FTHLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGLFIIDDKQNLRQ 476
F+HLAW+ T RK GGLG + PLISD + IS+ +GVL + GI RGLFIID + ++
Sbjct: 212 FSHLAWVQTDRKSGGLGDLKYPLISDVTKSISKSFGVLIPDQGIALRGLFIIDKEGVIQH 271
Query: 477 ITINDLPVGRSWRRPCGLVQGVPVXRTSTGEGVP 578
TIN+L +GRS +Q + + + E P
Sbjct: 272 STINNLAIGRSVDETMRTLQALQYVQDNPDEVCP 305
Score = 82.6 bits (195), Expect = 2e-16
Identities = 46/86 (53%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
Frame = +1
Query: 4 ASHSPVLSVFVYYSKVFSFNKMPLQMTKPAPQFKATAVVNGEFKDISLSDYKGK-YVVLF 180
+S S S FV ++ + PL K AP F A AV + EF ++ LSDY GK YV+LF
Sbjct: 48 SSRSARASSFV--ARAGGVDDAPLVGNK-APDFDAEAVFDQEFINVKLSDYIGKKYVILF 104
Query: 181 FYPLDFTFVCPTEIIAFSEKADEFRR 258
FYPLDFTFVCPTEI AFS++ DEF +
Sbjct: 105 FYPLDFTFVCPTEITAFSDRYDEFEK 130
>06_01_0671 - 4899611-4899829,4900870-4901448
Length = 265
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/43 (39%), Positives = 29/43 (67%)
Frame = +1
Query: 139 ISLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFRRSAA 267
+SLS +KG+ VV++FYP D T C + AF + ++F+++ A
Sbjct: 137 VSLSKFKGRPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGA 179
>04_03_0889 +
20568984-20569037,20569271-20569345,20569981-20570088,
20572066-20572179,20572393-20572509
Length = 155
Score = 38.3 bits (85), Expect = 0.004
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = +3
Query: 402 GVLDEETGIPFRGLFIIDDKQNLRQITINDLPVGRSWRRPCGLVQGVPVXRTSTGEGVP 578
GV + GI RGLFIID + ++ TIN+L +GRS +Q + + + E P
Sbjct: 73 GVSIDSVGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCP 131
>07_03_1427 +
26495072-26495148,26495323-26495468,26495581-26495729,
26495829-26496224
Length = 255
Score = 37.9 bits (84), Expect = 0.006
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +1
Query: 139 ISLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKADEFRRSAAR 270
I + D+ G YV+LF +P DFT VC TE+ A + A EF + +
Sbjct: 57 IRIHDFVGDTYVILFSHPGDFTPVCTTELAAMAGYAKEFDKRGVK 101
>07_03_1428 + 26498201-26498318,26498422-26498570,26498685-26499080
Length = 220
Score = 36.7 bits (81), Expect = 0.014
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 139 ISLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKADEFRRSAAR 270
I L D+ G YV++F +P DFT VC TE+ + A EF + +
Sbjct: 22 IRLHDFVGDAYVIIFSHPADFTPVCTTELSEMAGYAGEFDKRGVK 66
>01_03_0105 + 12604125-12604583
Length = 152
Score = 32.3 bits (70), Expect = 0.29
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = +2
Query: 347 SHEHPSDKRQVAPHLPRLRSAGRGDGHPLPRTLHHRRQAEPQADHHQRPA 496
SH+H Q +P +LR GR DG H RRQ Q + +PA
Sbjct: 62 SHQHKLFYSQPSPPRAKLRLVGRIDGRKEEAAHHSRRQPSLQKEAAAKPA 111
>01_01_1145 +
9073973-9074281,9075440-9075998,9076088-9076241,
9077475-9077565,9077722-9077793,9077879-9078390,
9078854-9078923,9079514-9079579,9080266-9080570,
9080872-9081006,9081141-9081204,9081429-9081574,
9081669-9081773,9082310-9082490
Length = 922
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = +2
Query: 314 DQHAAQAGRTRSHEHPSDKRQVAPHLPRLRSAGRGDGHPLPRTLHHRRQAEPQADHHQRP 493
+Q ++QAG P+ + P + + + G P+PR H+R + Q+ H QR
Sbjct: 616 NQRSSQAGTIDIDSKPAGGSKGNP-INIVNNGIEDSGQPIPRRRHNRGNRKAQSSHKQRF 674
Query: 494 ARGEVVEET 520
G T
Sbjct: 675 FPGNFANNT 683
>08_02_1147 -
24688686-24689729,24689875-24690036,24690339-24690368,
24690713-24690860,24691302-24691489
Length = 523
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +2
Query: 452 RRQAEPQADHHQRPARGEVVEETLRAGAGRSSXTDKHGRRCAPA 583
RRQ+E D R R E+ + + GRS D+ GR P+
Sbjct: 318 RRQSEVSGDDEPRRRRQEMPKHDEYSRRGRSDADDRRGRHYTPS 361
>01_01_0288 - 2373764-2373923,2374016-2374398,2375426-2375710
Length = 275
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = +3
Query: 327 RKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGLFIIDDKQNLRQITI 485
+K+ G G N+P D R ++DY +DE+ +P F I D++ + + +
Sbjct: 65 KKKKGSGAGNLPGAIDAEIREAQDYLAIDEQEPVPENFPFEILDEEGMSVVIL 117
>03_05_0428 + 24152409-24152783,24152885-24153139,24153204-24153917
Length = 447
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +2
Query: 317 QHAAQAGRTRSHEHPSDKRQVAPHLPRLRSAGRGDGHPLPRTLHHRRQAE 466
QH A+A R R + DK + H PR+ R HP R +++AE
Sbjct: 166 QHRARAARLRLLD--DDKEKPLLHTPRMMPTRRSPHHPRFRHQQQQQEAE 213
>03_03_0208 + 15459260-15459922
Length = 220
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = -1
Query: 580 RGTPSPVLVRXTGTPCTSPQGLLHDLPTGRSLMVICLRFCLSSMMKSPRK 431
RG P P R + PC LL PT ++V+CLR + +++ R+
Sbjct: 165 RGHPPP-RERLSSAPCREASPLLEPTPTA-PMVVLCLRAATAPPLQASRR 212
>07_03_1139 + 24254662-24255306
Length = 214
Score = 28.7 bits (61), Expect = 3.6
Identities = 21/70 (30%), Positives = 26/70 (37%), Gaps = 9/70 (12%)
Frame = +2
Query: 314 DQHAAQAGRTRSHEHPSDKRQVAPHLPRLR---------SAGRGDGHPLPRTLHHRRQAE 466
D A +T H D PHLP L +AG P P HHR ++
Sbjct: 140 DSSALCCPKTPPPAHRPDPATAVPHLPPLGRDPSPSPLPTAGENSTSPTPEREHHRGESP 199
Query: 467 PQADHHQRPA 496
A +RPA
Sbjct: 200 ADAFLARRPA 209
>03_05_0276 +
22646416-22646760,22646858-22647090,22647184-22647259,
22647383-22647459,22647559-22647592,22647699-22647848,
22647935-22648069,22648156-22648227
Length = 373
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 473 PEVLLVVDDEESSEGDARLLVQHS 402
P V++VVDD+E EGD +L ++
Sbjct: 81 PAVVVVVDDDEEGEGDPQLCAPYA 104
>10_08_0621 + 19328357-19329545,19329967-19329986
Length = 402
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 195 LHVRVPDGDHRVLGEGGRVPKIGCEVLGASTDSHFTHLAWI 317
L V++P+ +R L +G + + E L A TD+ T L WI
Sbjct: 166 LDVKIPEEGNRSLTDG-EIVTLCSEFLNAGTDTTSTGLQWI 205
>07_03_1402 + 26302443-26302575,26302851-26302980,26303128-26303893
Length = 342
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -2
Query: 435 GRGCPSPRPALRSRGRCGATCRL 367
G GC S P L RCG +CRL
Sbjct: 33 GHGCWSSVPKLAGLERCGKSCRL 55
>07_01_0717 - 5482084-5482482
Length = 132
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -3
Query: 545 WNALHQPAGSPPRPPHGQVVDGDLPE 468
W+ LHQ G P PPH G PE
Sbjct: 106 WSPLHQLLGFSPPPPHDLSRHGGRPE 131
>05_01_0288 + 2253005-2253137,2253269-2253398,2253504-2254524
Length = 427
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -2
Query: 435 GRGCPSPRPALRSRGRCGATCRL 367
G GC S P L RCG +CRL
Sbjct: 33 GHGCWSSVPKLAGLQRCGKSCRL 55
>03_03_0101 - 14431327-14432390,14432599-14432731
Length = 398
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -2
Query: 435 GRGCPSPRPALRSRGRCGATCRL 367
G GC S P L RCG +CRL
Sbjct: 33 GHGCWSSVPKLAGLERCGKSCRL 55
>02_03_0183 + 16106205-16106474
Length = 89
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3
Query: 360 PLISDKSHRISRDYGVLDEETGIP 431
PL S HR SR +G L E +G P
Sbjct: 59 PLASSHEHRFSRLHGCLPESSGFP 82
>02_02_0154 + 7263707-7263782,7263908-7264248
Length = 138
Score = 28.3 bits (60), Expect = 4.8
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -1
Query: 430 GMPVSSSSTP*SREMRCDLSLIRGMFMGPSPPCLRGVLIQARCVKCESVEAPSTS 266
G+ +S +T S + C LSL + PS CL+ A + C + AP S
Sbjct: 25 GVIATSKATSKSYKAACTLSLATCLPSLPSDKCLKAAFAAATSLLCLTAGAPPPS 79
>01_06_0448 +
29462920-29463052,29463220-29463349,29463608-29463732,
29463923-29464458
Length = 307
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -2
Query: 435 GRGCPSPRPALRSRGRCGATCRL 367
G GC S P L RCG +CRL
Sbjct: 33 GHGCWSSVPRLAGLQRCGKSCRL 55
>01_02_0017 - 10215995-10217018,10217120-10217249,10217364-10217496
Length = 428
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -2
Query: 435 GRGCPSPRPALRSRGRCGATCRL 367
G GC S P L RCG +CRL
Sbjct: 33 GHGCWSTVPKLAGLQRCGKSCRL 55
>12_01_0357 +
2720860-2721066,2721169-2721384,2721481-2723608,
2723699-2724124,2724242-2724546,2724660-2724823,
2724899-2724980
Length = 1175
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +2
Query: 422 GHPLPRTLHHRRQAEPQADHHQRPARGEVVEETLRAGAGRSSXTDKH 562
G PL R+LH +Q P A HH + + T+ A + + +H
Sbjct: 481 GAPLQRSLHVSQQQMPSAQHHALAHTPQGQQPTMMAQGIQQTPQHQH 527
>09_02_0453 - 9502060-9502773,9502795-9503367
Length = 428
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +2
Query: 401 RSAGRGDGHPLPRTLHHRRQAEPQADHHQRPARG 502
R G G G P HRR P H+ P RG
Sbjct: 50 RIIGAGGGSPCRAVEFHRRGRNPIVGHYYYPGRG 83
>04_04_1398 -
33245268-33245876,33247516-33247608,33247639-33247827,
33248146-33248496
Length = 413
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -3
Query: 524 AGSPPRPPHGQVVDGDLPEVLLVVDDEESSEGDARLLV 411
AG PP PP G D ++VV D +S +G L+
Sbjct: 21 AGRPPSPPSGSRGSADRRLGVVVVADPDSDQGSCDSLL 58
>02_01_0449 -
3229260-3229365,3230264-3230396,3230536-3230625,
3231097-3231309,3232317-3232407,3232519-3232707,
3232810-3232920,3233018-3233110
Length = 341
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/50 (24%), Positives = 26/50 (52%)
Frame = +1
Query: 115 VVNGEFKDISLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFRRSA 264
++N + K ++ D+ GK+ +L+F +CP E+ + D+ + A
Sbjct: 187 LLNHDGKPVTQKDFFGKWTLLYFGFTHCPDICPDELQKMALAIDKIKEKA 236
>10_08_0625 + 19362303-19363853
Length = 516
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 195 LHVRVPDGDHRVLGEGGRVPKIGCEVLGASTDSHFTHLAWI 317
L +++P+ +R L + + K+ E L A TD+ T L WI
Sbjct: 287 LDIKLPEDGNRALTDD-EIIKLCSEFLNAGTDTTSTALQWI 326
>10_06_0180 + 11526139-11526172,11526365-11527218
Length = 295
Score = 27.5 bits (58), Expect = 8.3
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = -3
Query: 533 HQPAGSPPRPP---HGQVVDGDLPEVLLVVDDEESSEGDARLLVQH 405
HQP PP PP + +VVDG V +EE+S + H
Sbjct: 167 HQPPPPPPPPPLAYNSKVVDGSTDSDSSAVFNEEASPYSGAAIDHH 212
>09_02_0057 -
3697255-3698116,3698191-3698351,3698442-3698636,
3698728-3699126,3699208-3699477,3700102-3700695
Length = 826
Score = 27.5 bits (58), Expect = 8.3
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +2
Query: 419 DGHPLPRTLHHRRQAEPQADH--HQRPARGEVVEETLRAGAGRSSXTDKHGRR 571
D H R HHRR+ + DH H+R G+ ++ R R + RR
Sbjct: 15 DRHHRSRDDHHRRRHDADDDHRRHKRGGGGDDDDDRRRRRHHRDDEEESRSRR 67
>07_03_0915 +
22556522-22556536,22557719-22558177,22559796-22560254,
22561869-22562348
Length = 470
Score = 27.5 bits (58), Expect = 8.3
Identities = 19/69 (27%), Positives = 31/69 (44%)
Frame = -3
Query: 536 LHQPAGSPPRPPHGQVVDGDLPEVLLVVDDEESSEGDARLLVQHSVVAGDAVRLVAYQRD 357
L + A +PP PPHG+ + + LV D+ ++ + + GD VRL
Sbjct: 40 LDKAARAPPPPPHGRADAREETCLALVADETAAAHFLLWGAERDAFEPGDIVRLTGGIFS 99
Query: 356 VHGTESALL 330
H + S +L
Sbjct: 100 YHRSNSLVL 108
Score = 27.5 bits (58), Expect = 8.3
Identities = 19/69 (27%), Positives = 31/69 (44%)
Frame = -3
Query: 536 LHQPAGSPPRPPHGQVVDGDLPEVLLVVDDEESSEGDARLLVQHSVVAGDAVRLVAYQRD 357
L + A +PP PPHG+ + + LV D+ ++ + + GD VRL
Sbjct: 193 LDKAARAPPPPPHGRADAREETCLALVADETAAAHFLLWGAERDAFEPGDIVRLTGGIFS 252
Query: 356 VHGTESALL 330
H + S +L
Sbjct: 253 YHRSNSLVL 261
Score = 27.5 bits (58), Expect = 8.3
Identities = 19/69 (27%), Positives = 31/69 (44%)
Frame = -3
Query: 536 LHQPAGSPPRPPHGQVVDGDLPEVLLVVDDEESSEGDARLLVQHSVVAGDAVRLVAYQRD 357
L + A +PP PPHG+ + + LV D+ ++ + + GD VRL
Sbjct: 346 LDKAARAPPPPPHGRADAREETCLALVADETAAAHFLLWGAERDAFEPGDIVRLTGGIFS 405
Query: 356 VHGTESALL 330
H + S +L
Sbjct: 406 YHRSNSLVL 414
>07_03_0914 + 22554314-22554328,22554586-22555065
Length = 164
Score = 27.5 bits (58), Expect = 8.3
Identities = 19/69 (27%), Positives = 31/69 (44%)
Frame = -3
Query: 536 LHQPAGSPPRPPHGQVVDGDLPEVLLVVDDEESSEGDARLLVQHSVVAGDAVRLVAYQRD 357
L + A +PP PPHG+ + + LV D+ ++ + + GD VRL
Sbjct: 40 LDKAARAPPPPPHGRADAREETCLALVADETAAAHFLLWGAERDAFEPGDIVRLTGGIFS 99
Query: 356 VHGTESALL 330
H + S +L
Sbjct: 100 YHRSNSLVL 108
>07_01_0478 - 3605306-3605614,3605766-3605906
Length = 149
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +2
Query: 410 GRGDGHPLPRTLHHR 454
G DGH LPRTL HR
Sbjct: 4 GGDDGHGLPRTLSHR 18
>02_05_1240 +
35181983-35182615,35183025-35183856,35183936-35184497,
35184581-35184722,35184832-35184939,35185055-35185267,
35185355-35185465,35185684-35185878,35186094-35186268,
35186379-35186413
Length = 1001
Score = 27.5 bits (58), Expect = 8.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 574 TPSPVLVRXTGTPCTSPQGL 515
TP P L+R T +PC P G+
Sbjct: 294 TPDPQLIRRTPSPCLPPVGV 313
>02_03_0131 - 15576422-15577021
Length = 199
Score = 27.5 bits (58), Expect = 8.3
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +2
Query: 323 AAQAGRTRSHEHPSDKRQVAPHLPRLRSAGRGDGHPLPRTLHHRRQAEPQADHHQRPARG 502
A ++ R SH H S + + +P R R DG P H+ +P+A + A G
Sbjct: 70 ADRSHRRHSHSH-SHRGRSSPSPDAGRHKRRRDGSPAAAATDHKDDKKPEAPVVPKSAAG 128
Query: 503 EVV 511
+ V
Sbjct: 129 DGV 131
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,232,067
Number of Sequences: 37544
Number of extensions: 370844
Number of successful extensions: 1792
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1789
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1376330256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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