Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0110
         (586 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U37429-15|AAN63412.1|  195|Caenorhabditis elegans Peroxiredoxin ...   136   1e-32
Z32683-2|CAA83619.1|  226|Caenorhabditis elegans Hypothetical pr...   116   2e-26
AC024761-15|AAM97968.1|  231|Caenorhabditis elegans Hypothetical...    37   0.012
Z82095-7|CAN86628.1|  390|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z82095-6|CAI79281.2|  412|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z82095-5|CAB05026.2|  414|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z46242-3|CAA86338.2|  680|Caenorhabditis elegans Hypothetical pr...    28   4.2  
Z46242-2|CAA86335.2|  683|Caenorhabditis elegans Hypothetical pr...    28   4.2  
Z81070-10|CAB03004.1|  163|Caenorhabditis elegans Hypothetical p...    28   5.6  
Z46935-4|CAA87051.1|  270|Caenorhabditis elegans Hypothetical pr...    28   5.6  
Z18854-1|CAA79306.1|  270|Caenorhabditis elegans capping protein...    28   5.6  
Z18806-1|CAA79270.1|  270|Caenorhabditis elegans capping protein...    28   5.6  
Z34533-1|CAA84302.3|  730|Caenorhabditis elegans Hypothetical pr...    27   9.8  
AL132860-19|CAB60502.1|  159|Caenorhabditis elegans Hypothetical...    27   9.8  
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e...    27   9.8  

>U37429-15|AAN63412.1|  195|Caenorhabditis elegans Peroxiredoxin
           protein 2 protein.
          Length = 195

 Score =  136 bits (329), Expect = 1e-32
 Identities = 66/93 (70%), Positives = 73/93 (78%)
 Frame = +3

Query: 258 IGCEVLGASTDSHFTHLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFR 437
           I   VL ASTDS F+HLAWIN PRK GGLG MNIP+++D +H+ISRDYGVL E+ GI FR
Sbjct: 66  INTVVLAASTDSVFSHLAWINQPRKHGGLGEMNIPVLADTNHQISRDYGVLKEDEGIAFR 125

Query: 438 GLFIIDDKQNLRQITINDLPVGRSWRRPCGLVQ 536
           GLFIID  QNLRQITINDLPVGRS      LVQ
Sbjct: 126 GLFIIDPSQNLRQITINDLPVGRSVDETLRLVQ 158



 Score =  109 bits (263), Expect = 1e-24
 Identities = 48/57 (84%), Positives = 54/57 (94%)
 Frame = +1

Query: 85  KPAPQFKATAVVNGEFKDISLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFR 255
           KPAPQFK  AVV+GEF D+SLSDYKGKYVVLFFYPLDFTFVCPTEIIAFS++A+EF+
Sbjct: 8   KPAPQFKTQAVVDGEFVDVSLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSDRAEEFK 64


>Z32683-2|CAA83619.1|  226|Caenorhabditis elegans Hypothetical
           protein R07E5.2 protein.
          Length = 226

 Score =  116 bits (278), Expect = 2e-26
 Identities = 49/84 (58%), Positives = 66/84 (78%)
 Frame = +3

Query: 258 IGCEVLGASTDSHFTHLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFR 437
           +G EV+  S DSHF+HLAW+NTPRK GGLG M+IPL++D + +I+  +GVLD+E+G+ +R
Sbjct: 95  LGAEVVACSCDSHFSHLAWVNTPRKDGGLGDMDIPLLADFNKKIADSFGVLDKESGLSYR 154

Query: 438 GLFIIDDKQNLRQITINDLPVGRS 509
           GLF+ID    +R  T NDLPVGRS
Sbjct: 155 GLFLIDPSGTVRHTTCNDLPVGRS 178



 Score = 93.5 bits (222), Expect = 1e-19
 Identities = 42/66 (63%), Positives = 51/66 (77%)
 Frame = +1

Query: 70  PLQMTKPAPQFKATAVVNGEFKDISLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSEKADE 249
           PL      P FK TAVV+G+FK IS  DYKGK++V+FFYPLDFTFVCPTEIIA+ ++A+E
Sbjct: 32  PLGPKNTVPAFKGTAVVDGDFKVISDQDYKGKWLVMFFYPLDFTFVCPTEIIAYGDRANE 91

Query: 250 FRRSAA 267
           FR   A
Sbjct: 92  FRSLGA 97


>AC024761-15|AAM97968.1|  231|Caenorhabditis elegans Hypothetical
           protein Y38C1AA.11 protein.
          Length = 231

 Score = 36.7 bits (81), Expect = 0.012
 Identities = 18/43 (41%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
 Frame = +1

Query: 133 KDISLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKADEFRR 258
           K+ +L +Y G+ +++LF +P DFT VC TE+    + A EFR+
Sbjct: 18  KNQTLHNYIGEQWLMLFSHPADFTPVCTTELAELVKLAPEFRK 60


>Z82095-7|CAN86628.1|  390|Caenorhabditis elegans Hypothetical
           protein ZK849.2c protein.
          Length = 390

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -3

Query: 497 GQVVDGDLPEVLLVVDDEESSEGDARLLVQHS 402
           GQV  GDL   L+ V  +E S+ D  + ++HS
Sbjct: 331 GQVQQGDLDLELVFVCPDEDSDDDGTVTIEHS 362


>Z82095-6|CAI79281.2|  412|Caenorhabditis elegans Hypothetical
           protein ZK849.2b protein.
          Length = 412

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -3

Query: 497 GQVVDGDLPEVLLVVDDEESSEGDARLLVQHS 402
           GQV  GDL   L+ V  +E S+ D  + ++HS
Sbjct: 353 GQVQQGDLDLELVFVCPDEDSDDDGTVTIEHS 384


>Z82095-5|CAB05026.2|  414|Caenorhabditis elegans Hypothetical
           protein ZK849.2a protein.
          Length = 414

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -3

Query: 497 GQVVDGDLPEVLLVVDDEESSEGDARLLVQHS 402
           GQV  GDL   L+ V  +E S+ D  + ++HS
Sbjct: 355 GQVQQGDLDLELVFVCPDEDSDDDGTVTIEHS 386


>Z46242-3|CAA86338.2|  680|Caenorhabditis elegans Hypothetical
           protein F35G12.4b protein.
          Length = 680

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 7/60 (11%)
 Frame = +3

Query: 354 NIPLISDKSHRISRDYG------VLDEETG-IPFRGLFIIDDKQNLRQITINDLPVGRSW 512
           N+ L    + R  +DYG      V+DE +  +     F++D K  + QIT+++L    SW
Sbjct: 414 NVALYDVLAARKIKDYGKRIFEEVVDENSRQVYIPSWFVVDSKSGMLQITLDELDALSSW 473


>Z46242-2|CAA86335.2|  683|Caenorhabditis elegans Hypothetical
           protein F35G12.4a protein.
          Length = 683

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 7/60 (11%)
 Frame = +3

Query: 354 NIPLISDKSHRISRDYG------VLDEETG-IPFRGLFIIDDKQNLRQITINDLPVGRSW 512
           N+ L    + R  +DYG      V+DE +  +     F++D K  + QIT+++L    SW
Sbjct: 414 NVALYDVLAARKIKDYGKRIFEEVVDENSRQVYIPSWFVVDSKSGMLQITLDELDALSSW 473


>Z81070-10|CAB03004.1|  163|Caenorhabditis elegans Hypothetical
           protein F26E4.12 protein.
          Length = 163

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +1

Query: 115 VVNGEFKDISLSDYKGKYVVL 177
           V N    D+SLSDYKGK +++
Sbjct: 9   VKNANGDDVSLSDYKGKVLII 29


>Z46935-4|CAA87051.1|  270|Caenorhabditis elegans Hypothetical
           protein M106.5 protein.
          Length = 270

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 18/70 (25%), Positives = 35/70 (50%)
 Frame = +3

Query: 300 THLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGLFIIDDKQNLRQI 479
           T + W+ T +   G+  MN+     + H +  D  + D+ T +   G  I D +  +R +
Sbjct: 171 TIMLWLQTNKSSSGV--MNLGGSLTRQHEM--DAPINDQNTHLANMGRMIEDQESKMR-L 225

Query: 480 TINDLPVGRS 509
           TIN++  G++
Sbjct: 226 TINEIYFGKT 235


>Z18854-1|CAA79306.1|  270|Caenorhabditis elegans capping protein
           beta subunit protein.
          Length = 270

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 18/70 (25%), Positives = 35/70 (50%)
 Frame = +3

Query: 300 THLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGLFIIDDKQNLRQI 479
           T + W+ T +   G+  MN+     + H +  D  + D+ T +   G  I D +  +R +
Sbjct: 171 TIMLWLQTNKSSSGV--MNLGGSLTRQHEM--DAPINDQNTHLANMGRMIEDQESKMR-L 225

Query: 480 TINDLPVGRS 509
           TIN++  G++
Sbjct: 226 TINEIYFGKT 235


>Z18806-1|CAA79270.1|  270|Caenorhabditis elegans capping protein
           beta subunit protein.
          Length = 270

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 18/70 (25%), Positives = 35/70 (50%)
 Frame = +3

Query: 300 THLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGLFIIDDKQNLRQI 479
           T + W+ T +   G+  MN+     + H +  D  + D+ T +   G  I D +  +R +
Sbjct: 171 TIMLWLQTNKSSSGV--MNLGGSLTRQHEM--DAPINDQNTHLANMGRMIEDQESKMR-L 225

Query: 480 TINDLPVGRS 509
           TIN++  G++
Sbjct: 226 TINEIYFGKT 235


>Z34533-1|CAA84302.3|  730|Caenorhabditis elegans Hypothetical
           protein B0285.1 protein.
          Length = 730

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +2

Query: 350 HEHPSDKRQVAPHLPRLRSAGRGDGHPLPRTLHHRRQAEP 469
           HE  S K++ +  L R      G GH +  T H R   +P
Sbjct: 625 HEMWSKKQKKSARLGRQAEGSSGSGHSIRATSHPRAPTQP 664


>AL132860-19|CAB60502.1|  159|Caenorhabditis elegans Hypothetical
           protein Y56A3A.21 protein.
          Length = 159

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = +1

Query: 31  FVYYSKVFSFNKMPLQMTKPAPQFKATAVVNGEFKDISLSDYKGKYVV 174
           F +Y   F   +  LQ +      + TA VNG    +S+SD   K+ V
Sbjct: 35  FFHYKTTF-ITEFTLQCSNNPKNIQYTAEVNGRLIPVSISDETAKFQV 81


>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of efl-1
            mutant phenotypeprotein 1 protein.
          Length = 4177

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = -3

Query: 542  NALHQPAGSPPRPPHGQVVDGDLPEVLL-VVDDEESSEGD 426
            +A   P  +P  PP   +VD  + +V   V DDEE  +GD
Sbjct: 2429 DAQDAPLAAPDAPPGINLVDEIMQQVQRDVEDDEEDEDGD 2468


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,547,371
Number of Sequences: 27780
Number of extensions: 269318
Number of successful extensions: 1048
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1048
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1226509528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)