Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0110
         (586 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             28   0.078
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    25   0.41 
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    23   2.9  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   2.9  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       21   6.7  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 27.9 bits (59), Expect = 0.078
 Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
 Frame = +2

Query: 341 TRSHEHPSDKRQVAPHLPRLRSAGRGD-GHPLPRTLHHRRQAEPQADHHQRP 493
           T+ +  P   R++     RL  +  GD   P  + LHH +   PQA    +P
Sbjct: 779 TQDYRIPEVMRRLMSEDKRLSKSVNGDQSQPPHQQLHHHQSTHPQAQAQAQP 830


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 25.4 bits (53), Expect = 0.41
 Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
 Frame = -2

Query: 429 GC-PSPRPALRSRGRCGATCRLSEGCSW 349
           GC P P P+   RGRC +  ++S    W
Sbjct: 42  GCVPKPIPSYACRGRCSSYLQVSGSKIW 69


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 4/55 (7%)
 Frame = +2

Query: 326 AQAGRTRSHEHPSDKRQVAPHLPRLRSAGRGDGHPL----PRTLHHRRQAEPQAD 478
           A+ G  R    P   R   P L R   A  G+  P+    PR  H R + EP+A+
Sbjct: 96  AEPGNNRPVYIPQP-RPPHPRLRREPEAEPGNNRPVYIPQPRPPHPRLRREPEAE 149


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +1

Query: 109  TAVVNGEFKDISLSDY 156
            T +++  FKD+ LSD+
Sbjct: 1401 TPIMDAHFKDVKLSDF 1416


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 113 AVALNWGAGLVICR 72
           A+ ++W AG V+CR
Sbjct: 99  AITVSWKAGDVMCR 112


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,135
Number of Sequences: 438
Number of extensions: 3061
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16993167
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)