Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0110
(586 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g11630.1 68416.m01425 2-cys peroxiredoxin, chloroplast (BAS1)... 100 8e-22
At5g06290.1 68418.m00705 2-cys peroxiredoxin, chloroplast, putat... 99 2e-21
At3g26060.1 68416.m03245 peroxiredoxin Q, putative similar to pe... 46 2e-05
At1g48130.1 68414.m05371 peroxiredoxin (PER1) / rehydrin, putati... 34 0.061
At5g57370.1 68418.m07168 expressed protein low similarity to nuc... 33 0.11
At2g12345.1 68415.m01333 hypothetical protein 31 0.43
At3g06050.1 68416.m00692 alkyl hydroperoxide reductase/thiol spe... 31 0.75
At5g11930.1 68418.m01395 glutaredoxin family protein contains IN... 30 0.99
At4g16750.1 68417.m02530 DRE-binding transcription factor, putat... 30 0.99
At3g14860.2 68416.m01879 NHL repeat-containing protein contains ... 30 1.3
At3g14860.1 68416.m01878 NHL repeat-containing protein contains ... 30 1.3
At1g80910.1 68414.m09493 expressed protein 29 2.3
At5g26660.1 68418.m03174 myb family transcription factor (MYB4) ... 28 4.0
At4g39350.1 68417.m05570 cellulose synthase, catalytic subunit (... 28 4.0
At3g62170.1 68416.m06985 pectinesterase family protein contains ... 28 4.0
At2g21770.1 68415.m02588 cellulose synthase, catalytic subunit, ... 28 4.0
At1g57560.1 68414.m06531 myb family transcription factor (MYB50)... 28 4.0
At1g09540.1 68414.m01070 myb family transcription factor (MYB61)... 28 4.0
At4g16146.1 68417.m02449 expressed protein 28 5.3
At4g07493.1 68417.m01156 hypothetical protein 28 5.3
At1g13930.1 68414.m01635 expressed protein weakly similar to dro... 28 5.3
At5g65760.1 68418.m08275 serine carboxypeptidase S28 family prot... 27 7.0
At4g28395.1 68417.m04064 lipid transfer protein, putative identi... 27 7.0
At3g22170.1 68416.m02798 far-red impaired responsive protein, pu... 27 7.0
At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (... 27 9.2
At4g08455.1 68417.m01394 BTB/POZ domain-containing protein Inter... 27 9.2
At3g10380.1 68416.m01244 exocyst complex component-related ident... 27 9.2
At3g08950.1 68416.m01045 electron transport SCO1/SenC family pro... 27 9.2
At1g16020.2 68414.m01922 expressed protein 27 9.2
At1g16020.1 68414.m01921 expressed protein 27 9.2
>At3g11630.1 68416.m01425 2-cys peroxiredoxin, chloroplast (BAS1)
identical to SP|Q96291 2-cys peroxiredoxin BAS1,
chloroplast precursor {Arabidopsis thaliana}; contains
Pfam profile: PF00578 AhpC/TSA (alkyl hydroperoxide
reductase and thiol-specific antioxidant) family
Length = 266
Score = 100 bits (239), Expect = 8e-22
Identities = 50/108 (46%), Positives = 67/108 (62%)
Frame = +3
Query: 255 KIGCEVLGASTDSHFTHLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPF 434
K+ EVLG S DS F+HLAW+ T RK GGLG +N PLISD + IS+ +GVL + GI
Sbjct: 135 KLNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLISDVTKSISKSFGVLIHDQGIAL 194
Query: 435 RGLFIIDDKQNLRQITINDLPVGRSWRRPCGLVQGVPVXRTSTGEGVP 578
RGLFIID + ++ TIN+L +GRS +Q + + + E P
Sbjct: 195 RGLFIIDKEGVIQHSTINNLGIGRSVDETMRTLQALQYIQENPDEVCP 242
Score = 80.6 bits (190), Expect = 7e-16
Identities = 40/65 (61%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Frame = +1
Query: 67 MPLQMTKPAPQFKATAVVNGEFKDISLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKA 243
+PL K AP F+A AV + EF + LSDY GK YV+LFFYPLDFTFVCPTEI AFS++
Sbjct: 72 LPLVGNK-APDFEAEAVFDQEFIKVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRH 130
Query: 244 DEFRR 258
EF +
Sbjct: 131 SEFEK 135
>At5g06290.1 68418.m00705 2-cys peroxiredoxin, chloroplast, putative
very strong similarity to SP|Q96291 2-cys peroxiredoxin
BAS1, chloroplast precursor {Arabidopsis thaliana};
contains Pfam profile: PF00578 AhpC/TSA (alkyl
hydroperoxide reductase and thiol-specific antioxidant)
family
Length = 273
Score = 99.1 bits (236), Expect = 2e-21
Identities = 49/108 (45%), Positives = 67/108 (62%)
Frame = +3
Query: 255 KIGCEVLGASTDSHFTHLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPF 434
K+ EVLG S DS F+HLAW+ T RK GGLG +N PL+SD + IS+ +GVL + GI
Sbjct: 142 KLNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLVSDITKSISKSFGVLIPDQGIAL 201
Query: 435 RGLFIIDDKQNLRQITINDLPVGRSWRRPCGLVQGVPVXRTSTGEGVP 578
RGLFIID + ++ TIN+L +GRS +Q + + + E P
Sbjct: 202 RGLFIIDKEGVIQHSTINNLGIGRSVDETMRTLQALQYVQENPDEVCP 249
Score = 79.8 bits (188), Expect = 1e-15
Identities = 39/65 (60%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Frame = +1
Query: 67 MPLQMTKPAPQFKATAVVNGEFKDISLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKA 243
+PL K AP F+A AV + EF + LS+Y GK YV+LFFYPLDFTFVCPTEI AFS++
Sbjct: 79 LPLVGNK-APDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITAFSDRY 137
Query: 244 DEFRR 258
+EF +
Sbjct: 138 EEFEK 142
>At3g26060.1 68416.m03245 peroxiredoxin Q, putative similar to
peroxiredoxin Q [Sedum lineare] GI:6899842; contains
Pfam profile: PF00578 AhpC/TSA (alkyl hydroperoxide
reductase and thiol-specific antioxidant) family
Length = 216
Score = 45.6 bits (103), Expect = 2e-05
Identities = 20/45 (44%), Positives = 29/45 (64%)
Frame = +1
Query: 133 KDISLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFRRSAA 267
K +SL YKGK VVL+FYP D T C + AF + ++F+++ A
Sbjct: 86 KPVSLKKYKGKPVVLYFYPADETPGCTKQACAFRDSYEKFKKAGA 130
Score = 33.1 bits (72), Expect = 0.14
Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Frame = +3
Query: 255 KIGCEVLGASTDSHFTHLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETG-IP 431
K G EV+G S D +H A+ + + + L+SD+ +++ +D+GV + G +P
Sbjct: 127 KAGAEVIGISGDDSASHKAFASKYK-------LPYTLLSDEGNKVRKDWGVPGDLFGALP 179
Query: 432 FRGLFIIDDKQNLRQITIND 491
R +++ DK + Q+ N+
Sbjct: 180 GRQTYVL-DKNGVVQLIYNN 198
>At1g48130.1 68414.m05371 peroxiredoxin (PER1) / rehydrin, putative
identical to peroxiredoxin (Rehydrin homolog)
[Arabidopsis thaliana] SWISS-PROT:O04005; contains Pfam
profile: PF00578 AhpC/TSA (alkyl hydroperoxide reductase
and thiol-specific antioxidant) family
Length = 216
Score = 34.3 bits (75), Expect = 0.061
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +1
Query: 145 LSDY-KGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFRRSAAR 270
L DY + VLF +P DFT VC TE+ A ++ A EF + +
Sbjct: 24 LHDYFANSWTVLFSHPGDFTPVCTTELGAMAKYAHEFDKRGVK 66
Score = 33.5 bits (73), Expect = 0.11
Identities = 21/85 (24%), Positives = 35/85 (41%)
Frame = +3
Query: 255 KIGCEVLGASTDSHFTHLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPF 434
K G ++LG S D +H WI +N P+I+D + I ++D P
Sbjct: 62 KRGVKLLGLSCDDVQSHKDWIKDIEAFNHGSKVNYPIIADPNKEIIPQLNMIDPIENGPS 121
Query: 435 RGLFIIDDKQNLRQITINDLPVGRS 509
R L I+ ++ + GR+
Sbjct: 122 RALHIVGPDSKIKLSFLYPSTTGRN 146
>At5g57370.1 68418.m07168 expressed protein low similarity to
nucleic acid binding protein [Homo sapiens] GI:431953
Length = 219
Score = 33.5 bits (73), Expect = 0.11
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +2
Query: 338 RTRSHEHPSDKRQV-APHLPRLRSAGRGDGHPLPRTLHHRRQA-EPQADHHQRPARGEVV 511
R+R+ +H + R V +P R RS R HHRR++ P A +RP +G V
Sbjct: 54 RSRTPDHHARARHVRSPERYRSRSRSIDRDRDRDRQRHHRRRSPSPDAPSRKRPRQGSVD 113
Query: 512 EETLR 526
+E R
Sbjct: 114 DEKER 118
>At2g12345.1 68415.m01333 hypothetical protein
Length = 169
Score = 31.5 bits (68), Expect = 0.43
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
Frame = +2
Query: 392 PRLRSAGRGDGHPLPRTLHHRRQAEPQADHHQRPARGEVVEE----TLRAGAGRSSXTDK 559
P +A RG P P+ R QA + DH + EV+EE + AG RS + K
Sbjct: 25 PSSHAAARGLSEPSPKGSRRREQASFEIDHSESSQEEEVMEEEETFSPPAGNTRSRRSSK 84
Query: 560 HGRR 571
R
Sbjct: 85 SSAR 88
>At3g06050.1 68416.m00692 alkyl hydroperoxide reductase/thiol
specific antioxidant (AhpC/TSA)/mal allergen family
protein identical to SP|Q9M7T0 Putative peroxiredoxin,
mitochondrial precursor {Arabidopsis thaliana}; similar
to thioredoxin peroxidase [Capsicum annuum] GI:18654477;
contains Pfam profile: PF00578 AhpC/TSA (alkyl
hydroperoxide reductase and thiol-specific antioxidant)
family
Length = 201
Score = 30.7 bits (66), Expect = 0.75
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +1
Query: 118 VNGEFKDISLSD-YKGKYVVLFFYPLDFTFVCPTE-IIAFSEKADEFR 255
V+ +F LSD +KGK VV+F P +T VC + + ++ D+F+
Sbjct: 58 VSSKFSTTPLSDIFKGKKVVIFGLPGAYTGVCSQQHVPSYKSHIDKFK 105
>At5g11930.1 68418.m01395 glutaredoxin family protein contains
INTERPRO Domain IPR002109, Glutaredoxin
(thioltransferase)
Length = 148
Score = 30.3 bits (65), Expect = 0.99
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = -3
Query: 536 LHQPAGSPPRPPHGQVVDGDLPEVLLVVDDEESSEGD-ARLLVQHSVV 396
+H P P PP V L D+EE+SE RL+ +H V+
Sbjct: 21 VHPPPPPPLPPPAPSTVSSSTASTSLSFDEEETSESKIGRLISEHPVI 68
>At4g16750.1 68417.m02530 DRE-binding transcription factor, putative
similar to DRE binding factor 2 [Zea mays] GI:21908034;
contains Pfam profile PF00847: AP2 domain
Length = 179
Score = 30.3 bits (65), Expect = 0.99
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = -3
Query: 566 ARACPXNWNALHQPAGSPPRPPHGQVVDGDLPEVLLVVDDEESSEG 429
A A +W A P+ + P DLP++LL V+D ++G
Sbjct: 118 AAAAAVDWKAPESPSSTVTSSPVADDAFSDLPDLLLDVNDHNKNDG 163
>At3g14860.2 68416.m01879 NHL repeat-containing protein contains
Pfam profile PF01436: NHL repeat
Length = 493
Score = 29.9 bits (64), Expect = 1.3
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 3/84 (3%)
Frame = +2
Query: 317 QHAAQAGRTRS-HEH-PSDKRQVAPH-LPRLRSAGRGDGHPLPRTLHHRRQAEPQADHHQ 487
+H A A + S H H P H P+LRS+ L + HHR ++ Q D+ Q
Sbjct: 368 RHTAPAPISESRHAHLPKADDSYPEHKTPKLRSSSVMKDPTLSSSKHHRTSSKRQ-DYAQ 426
Query: 488 RPARGEVVEETLRAGAGRSSXTDK 559
A GEV + + R DK
Sbjct: 427 FYASGEVAQPKIHKERSRRRHRDK 450
>At3g14860.1 68416.m01878 NHL repeat-containing protein contains
Pfam profile PF01436: NHL repeat
Length = 492
Score = 29.9 bits (64), Expect = 1.3
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 3/84 (3%)
Frame = +2
Query: 317 QHAAQAGRTRS-HEH-PSDKRQVAPH-LPRLRSAGRGDGHPLPRTLHHRRQAEPQADHHQ 487
+H A A + S H H P H P+LRS+ L + HHR ++ Q D+ Q
Sbjct: 367 RHTAPAPISESRHAHLPKADDSYPEHKTPKLRSSSVMKDPTLSSSKHHRTSSKRQ-DYAQ 425
Query: 488 RPARGEVVEETLRAGAGRSSXTDK 559
A GEV + + R DK
Sbjct: 426 FYASGEVAQPKIHKERSRRRHRDK 449
>At1g80910.1 68414.m09493 expressed protein
Length = 497
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +1
Query: 136 DISLSDYKGKYV--VLFFYPLDFTFVCPTEIIAFSEKADEFRR 258
D+ ++G+ + +LFFYP D TF +I SE F R
Sbjct: 19 DLRRGQHEGQELDKILFFYPPDLTFSTQLSVIGLSEGLITFTR 61
>At5g26660.1 68418.m03174 myb family transcription factor (MYB4)
(MYB86) contains Pfam profile: PF00249 myb-like
DNA-binding domain; identical to cDNA putative
transcription factor (MYB86) mRNA, partial cds
GI:3941517
Length = 352
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -2
Query: 435 GRGCPSPRPALRSRGRCGATCRL 367
G GC S P L RCG +CRL
Sbjct: 33 GHGCWSSVPKLAGLQRCGKSCRL 55
>At4g39350.1 68417.m05570 cellulose synthase, catalytic subunit
(Ath-A) identical to gi:2827141
Length = 1084
Score = 28.3 bits (60), Expect = 4.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 419 DGHPLPRTLHHRRQAEPQADHHQR 490
DG+ LPR ++ R+ P DHH++
Sbjct: 516 DGNELPRLVYVSREKRPGFDHHKK 539
>At3g62170.1 68416.m06985 pectinesterase family protein contains
Pfam profiles: PF01095 pectinesterase, PF04043 plant
invertase/pectin methylesterase inhibitor ;similar to
pollen-specific pectin esterase GI:1620652 from
[Brassica rapa subsp. pekinensis]
Length = 588
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -2
Query: 171 NIFPLVVRQRNVLELSVDDGRGLELGSGFGHLQRHLVETKD 49
+IF VV + + VDD + + +G+G G R L+E D
Sbjct: 192 DIFHSVVTAMAQMGVKVDDMKNITMGAGAGGAARRLLEDND 232
>At2g21770.1 68415.m02588 cellulose synthase, catalytic subunit,
putative similar to gi:2827141 cellulose synthase
catalytic subunit, Arabidopsis thaliana (Ath-A)
Length = 1088
Score = 28.3 bits (60), Expect = 4.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 419 DGHPLPRTLHHRRQAEPQADHHQR 490
DG+ LPR ++ R+ P DHH++
Sbjct: 521 DGNELPRLVYVSREKRPGFDHHKK 544
>At1g57560.1 68414.m06531 myb family transcription factor (MYB50)
similar to DNA-binding protein GI:19058 from [Hordeum
vulgare]
Length = 314
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -2
Query: 435 GRGCPSPRPALRSRGRCGATCRL 367
G GC S P L RCG +CRL
Sbjct: 33 GHGCWSSVPKLAGLERCGKSCRL 55
>At1g09540.1 68414.m01070 myb family transcription factor (MYB61)
contains PFAM profile: myb DNA-binding domain PF00249
Length = 366
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -2
Query: 435 GRGCPSPRPALRSRGRCGATCRL 367
G GC S P L RCG +CRL
Sbjct: 33 GHGCWSSVPKLAGLQRCGKSCRL 55
>At4g16146.1 68417.m02449 expressed protein
Length = 102
Score = 27.9 bits (59), Expect = 5.3
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +3
Query: 330 KQGGLGPMNIPLISDKSHRI---SRDYGVLDEETGIPFRGLFIID 455
K GGL P PLIS S R S D+ +L +E I R + I+
Sbjct: 25 KYGGLVPKKKPLISKDSKRAFFDSADWALLKQEASIDQRTIAAIE 69
>At4g07493.1 68417.m01156 hypothetical protein
Length = 158
Score = 27.9 bits (59), Expect = 5.3
Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
Frame = +2
Query: 407 AGRGDGHPLPRTLHHRRQAEPQADHHQRPARGEVV--EETLRAGAGRSSXTDKHGRR 571
A RG P P R QA + DH + EV+ EET + G + K R
Sbjct: 30 AARGLSEPSPMGSSRREQASFKIDHSESSQEEEVMQEEETFSSPVGNTRSRSKSSAR 86
>At1g13930.1 68414.m01635 expressed protein weakly similar to
drought-induced protein SDi-6 (PIR:S71562) common
sunflower (fragment)
Length = 155
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = -3
Query: 524 AGSPPRPPHGQVVDGDLPEVLLVVDDEESSEG 429
AG PP PP Q PE DDEES G
Sbjct: 112 AGGPP-PPTSQAEPASQPEPAAKKDDEESGGG 142
>At5g65760.1 68418.m08275 serine carboxypeptidase S28 family protein
similar to SP|P42785 Lysosomal Pro-X carboxypeptidase
precursor (EC 3.4.16.2) (Prolylcarboxypeptidase) (PRCP)
(Proline carboxypeptidase) {Homo sapiens}; contains Pfam
profile PF05577: Serine carboxypeptidase S28
Length = 515
Score = 27.5 bits (58), Expect = 7.0
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 4 ASHSPVLSVFVYYSKVFSFNKMPLQMTKPAPQFKATAVVNGE 129
ASH +L +F +++ VF N L +K P+F N E
Sbjct: 2 ASHFCLLLIFTFFTLVFPSNGSSLSSSKLLPRFPRYTFQNRE 43
>At4g28395.1 68417.m04064 lipid transfer protein, putative identical
to anther-specific gene ATA7 [gi:2746339]; contains Pfam
protease inhibitor/seed storage/LTP family domain
Length = 180
Score = 27.5 bits (58), Expect = 7.0
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -1
Query: 388 MRCDLSLIRGMFMGPSPPCLRGVLIQARCVKCES 287
M C + + G+F PSP C RGV VK S
Sbjct: 77 MPC-MGFVEGIFQQPSPDCCRGVTHLNNVVKFTS 109
>At3g22170.1 68416.m02798 far-red impaired responsive protein,
putative similar to far-red impaired response protein
FAR1 [Arabidopsis thaliana] gi|5764395|gb|AAD51282;
contains Pfam:PF03101 domain: FAR1 family
Length = 839
Score = 27.5 bits (58), Expect = 7.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 314 DQHAAQAGRTRSHEHPSDKRQVAP 385
D H+ AG+T ++P+ KR+V P
Sbjct: 698 DNHSRSAGKTSKKKNPTKKRKVNP 721
>At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit
(IRX3) identical to gi:5230423
Length = 1026
Score = 27.1 bits (57), Expect = 9.2
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +2
Query: 419 DGHPLPRTLHHRRQAEPQADHHQR 490
+GH LPR ++ R+ P HH++
Sbjct: 477 EGHELPRLVYVSREKRPGFQHHKK 500
>At4g08455.1 68417.m01394 BTB/POZ domain-containing protein Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to POZ 56
protein (GI:17483747) [Mus musculus]
Length = 243
Score = 27.1 bits (57), Expect = 9.2
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -3
Query: 524 AGSPPRPPHGQVVDGDLP--EVLLVVDDEESSEGDARLLVQHSVVAGDAVRLVAY 366
AGSPP P H V+ P + +L + EES G ++ S V+ DA+R Y
Sbjct: 75 AGSPPIPAHKSVLVSRSPVFKAMLENEMEESLSGTIKI----SDVSYDALRTFVY 125
>At3g10380.1 68416.m01244 exocyst complex component-related
identical to Probable exocyst complex component Sec8
(Swiss-Prot:Q93YU5) [Arabidopsis thaliana]; weak
similarity to Exocyst complex component Sec8 (rSec8)
(Swiss-Prot:Q62824) [Rattus norvegicus]
Length = 1053
Score = 27.1 bits (57), Expect = 9.2
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = +2
Query: 359 PSDKRQVAPHLPRLR---SAGRGDGHPLPRTLHHRRQAEPQADHHQRPARGEVVEETL 523
PSDK + L R+ +A R D LP +H + +AD H + +VVEE +
Sbjct: 10 PSDKTYLREELARIDESWAAARFDS--LPHVVHILTSKDREADIHILKEQSDVVEEVV 65
>At3g08950.1 68416.m01045 electron transport SCO1/SenC family
protein similar to SP|P23833 SCO1 protein, mitochondrial
precursor {Saccharomyces cerevisiae}; contains Pfam
profile PF02630: SCO1/SenC
Length = 334
Score = 27.1 bits (57), Expect = 9.2
Identities = 10/51 (19%), Positives = 27/51 (52%)
Frame = +1
Query: 112 AVVNGEFKDISLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFRRSA 264
+++ + K ++ + GK+ +L+F +CP E+I + D+ + ++
Sbjct: 178 SLIRDDGKRVTEKNLMGKWTILYFGFTHCPDICPDELIKLAAAIDKIKENS 228
>At1g16020.2 68414.m01922 expressed protein
Length = 502
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +1
Query: 172 VLFFYPLDFTFVCPTEIIAFSEKADEFRR 258
+LFFYP D F +I SE F R
Sbjct: 31 ILFFYPADLDFSTQLSVIGLSEGLITFTR 59
>At1g16020.1 68414.m01921 expressed protein
Length = 515
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +1
Query: 172 VLFFYPLDFTFVCPTEIIAFSEKADEFRR 258
+LFFYP D F +I SE F R
Sbjct: 31 ILFFYPADLDFSTQLSVIGLSEGLITFTR 59
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,065,831
Number of Sequences: 28952
Number of extensions: 252680
Number of successful extensions: 905
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 901
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1151426952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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