Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0109
         (697 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    24   1.4  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    24   1.4  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   3.2  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        23   3.2  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   7.3  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   7.3  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    21   7.3  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   7.3  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   9.6  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   9.6  

>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 13/21 (61%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
 Frame = +3

Query: 195 GKLL-FLGLDNAGKTTLLHML 254
           G+LL  LG   AGKTTLL+ L
Sbjct: 104 GELLAILGSSGAGKTTLLNTL 124


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 13/21 (61%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
 Frame = +3

Query: 195 GKLL-FLGLDNAGKTTLLHML 254
           G+LL  LG   AGKTTLL+ L
Sbjct: 104 GELLAILGSSGAGKTTLLNTL 124


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = -3

Query: 509 TAQGSY*ASRQ*ATSLVQPWTPADVAGHTRRPGTLSRPPRGSSRATH 369
           T+  +Y +SR   TS     T A        PG  S+PP  +S   H
Sbjct: 91  TSNPTY-SSRSVMTSCSSVPTTASYGSDLYFPGATSQPPTDNSHVHH 136


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -2

Query: 294 GCKVGTC*ASLSSSTYVRVLSSLHCQ 217
           GCK G C   ++S T     S+L  Q
Sbjct: 139 GCKKGVCTMEINSDTMCVTFSNLGIQ 164


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +2

Query: 617 ELPGRPLELFMC 652
           ELPG  L LF C
Sbjct: 495 ELPGETLRLFTC 506


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +2

Query: 617 ELPGRPLELFMC 652
           ELPG  L LF C
Sbjct: 502 ELPGETLRLFTC 513


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 354 CPPRSNVVKRILP 316
           CPP+   +KR+LP
Sbjct: 53  CPPQGVDLKRVLP 65


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -2

Query: 663 SAPEHMKSSSGRPGSSDLDTFPFPVVC*Y 577
           S P H K+ +    +S  D   + VVC Y
Sbjct: 65  SRPGHRKTDNSLSATSKKDKDGYKVVCYY 93


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -1

Query: 220 SSPRNKSLPDFFHRPRNPNTPV 155
           S  +NKSL  F    RN +TP+
Sbjct: 413 SDYQNKSLAAFDFVARNSDTPI 434


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
          protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -1

Query: 58 VICYVVKWII 29
          VICYV  W I
Sbjct: 26 VICYVASWAI 35


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,964
Number of Sequences: 336
Number of extensions: 3256
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)